Clone Name	rbaet100e11
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY106272.1| Zea mays PCO085431 mRNA sequence	192	6e-46
2	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	153	5e-34
3	dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic D...	153	5e-34
4	dbj|AK071823.1| Oryza sativa (japonica cultivar-group) cDNA clon...	153	5e-34
5	ref|NM_189782.1| Oryza sativa (japonica cultivar-group), predic...	151	2e-33
6	dbj|AK100697.1| Oryza sativa (japonica cultivar-group) cDNA clon...	145	1e-31
7	ref|NM_113705.2| Arabidopsis thaliana NQR (NADPH:QUINONE OXIDORE...	70	6e-09
8	gb|BT024581.1| Arabidopsis thaliana At3g27890 mRNA, complete cds	70	6e-09
9	emb|BX826086.1|CNS0A6DG Arabidopsis thaliana Full-length cDNA Co...	70	6e-09
10	dbj|AP000371.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...	70	6e-09
11	gb|AF145234.1|AF145234 Arabidopsis thaliana NADPH:quinone oxidor...	70	6e-09
12	ref|NM_189784.1| Oryza sativa (japonica cultivar-group), predic...	46	0.089
13	dbj|AK062729.1| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.089
14	gb|AC159313.3| Mus musculus BAC clone RP23-99D11 from chromosome...	44	0.35
15	emb|AL671545.13| Human DNA sequence from clone CITF22-53E7 on ch...	44	0.35
16	emb|AL009174.1|HS417G15 Human DNA sequence from clone RP3-417G15...	44	0.35
17	gb|BC077326.1| Xenopus laevis tyrosine phosphatase, mRNA (cDNA c...	42	1.4
18	ref|XM_530048.1| PREDICTED: Pan troglodytes LOC456113 (LOC456113...	40	5.5
19	gb|AC151913.1| Pan troglodytes chromosome X clone RP43-057B02 ma...	40	5.5
20	gb|AC006334.3| Homo sapiens BAC clone RP11-421B22 from 7, comple...	40	5.5
21	gb|AC145968.3| Pan troglodytes BAC clone RP43-12H15 from 7, comp...	40	5.5
22	gb|AC073330.6| Homo sapiens BAC clone RP11-409J21 from 7, comple...	40	5.5
23	gb|AC130808.36| Medicago truncatula clone mth2-34k9, complete se...	40	5.5
24	emb|AL356956.11| Human DNA sequence from clone RP11-538A16 on ch...	40	5.5
25	emb|AL589699.4| Mouse DNA sequence from clone RP23-92G13 on chro...	40	5.5
26	gb|AC098964.4| Homo sapiens chromosome 8 clone RP11-141M14 map 8...	40	5.5
27	gb|AC092066.4| Homo sapiens chromosome 19 clone CTB-171A8, compl...	40	5.5
28	gb|AF279873.4| Homo sapiens chromosome 8 clone RP1-25D10, RP1-27...	40	5.5
29	gb|AC099845.2| Homo sapiens chromosome 18, clone RP11-812D21, co...	40	5.5
30	gb|AC182361.3| Spermophilus tridecemlineatus clone VMRC20-433G18...	40	5.5
31	gb|AC009078.6| Homo sapiens chromosome 16 clone RP11-331F4, comp...	40	5.5
32	gb|AC105218.4| Homo sapiens chromosome 8, clone RP11-410F13, com...	40	5.5
33	gb|AC008426.4| Homo sapiens chromosome 5 clone CTC-307A7, comple...	40	5.5
34	gb|S47891.1| XSTK2=activin receptor [Xenopus laevis, mRNA, 1467 nt]	40	5.5
35	gb|AC022274.5|AC022274 Homo sapiens BAC clone RP11-697M17 from 8...	40	5.5
36	gb|AC129935.8| Mus musculus chromosome 15, clone RP23-269P8, com...	40	5.5
37	gb|AC099508.3| Homo sapiens chromosome 16 clone RP11-252E2, comp...	40	5.5
38	gb|AC009452.21| Homo sapiens chromosome 17, clone RP11-4F22, com...	40	5.5
39	gb|AC006343.3| Homo sapiens PAC clone RP4-548K24 from 7q34-q36, ...	40	5.5
40	gb|AY948960.1| Homo sapiens amiloride-binding protein 1 (amine o...	40	5.5
41	gb|AC068948.1|AC068948 Homo sapiens chromosome 19, cosmid R28371...	40	5.5
42	dbj|AK098812.1| Homo sapiens cDNA FLJ25946 fis, clone JTH14258	40	5.5
43	gb|AC006120.1|AC006120 Homo sapiens chromosome 17, clone hRPK.34...	40	5.5
44	ref|NM_019275.1| Rattus norvegicus MAD homolog 4 (Drosophila) (S...	40	5.5
45	gb|AF056002.1|AF056002 Rattus norvegicus Smad4 protein (Smad4) m...	40	5.5
46	emb|AL772223.7| Mouse DNA sequence from clone RP23-372J10 on chr...	40	5.5
47	emb|AL935179.6| Mouse DNA sequence from clone RP24-70H3 on chrom...	40	5.5
48	emb|AL833787.8| Mouse DNA sequence from clone RP23-228E2 on chro...	40	5.5

---

>gb|AY106272.1| Zea mays PCO085431 mRNA sequence
          Length = 1019

 Score =  192 bits (97), Expect = 6e-46
 Identities = 175/201 (87%)
 Strand = Plus / Minus

                                                                       
Query: 208 cctgagtgtgaaggcctggagggacaaaagcactttcttgatccgctctctgatctcagc 267
           |||||| ||||||||||| ||||| |  ||||||||||||| |||||||||||| |||||
Sbjct: 741 cctgagcgtgaaggcctgaagggataggagcactttcttgagccgctctctgatttcagc 682

                                                                       
Query: 268 gtcaatcaaatttccatcgctgtcgaacttggggggctgctgaaatgcttggacaaacag 327
            || | || ||||||||||||||| |||||||| |||||||| || ||||||||  ||||
Sbjct: 681 atcgaccagatttccatcgctgtcaaacttgggtggctgctggaaggcttggacgcacag 622

                                                                       
Query: 328 ctctggcttgttgatgaaatgaagatctaagaacaccccgacttgccggagatggtactg 387
            |||||||||||||||||||| ||||| | ||| |||||||| || ||||||||||||||
Sbjct: 621 ttctggcttgttgatgaaatggagatccaggaaaaccccgacctgacggagatggtactg 562

                                
Query: 388 cgatctacctcctccaaagcc 408
           ||| || ||||||||||||||
Sbjct: 561 cgacctccctcctccaaagcc 541

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  153 bits (77), Expect = 5e-34
 Identities = 185/221 (83%)
 Strand = Plus / Plus

                                                                            
Query: 189      ttcaatccttattctggatcctgagtgtgaaggcctggagggacaaaagcactttcttga 248
                ||||||| || || |||| |||||||||||| ||||| ||||| || || |||| |||||
Sbjct: 41999520 ttcaatctttcttttggagcctgagtgtgaaagcctgaagggataagagaacttgcttga 41999579

                                                                            
Query: 249      tccgctctctgatctcagcgtcaatcaaatttccatcgctgtcgaacttggggggctgct 308
                |||| |||||||| |  || ||||||||||| ||||| ||||| ||||| || |||||||
Sbjct: 41999580 tccgttctctgatttgcgcatcaatcaaattaccatcactgtcaaactttggaggctgct 41999639

                                                                            
Query: 309      gaaatgcttggacaaacagctctggcttgttgatgaaatgaagatctaagaacaccccga 368
                 ||||||||  ||    || ||||||||||||||||| ||||||||||| || |||||||
Sbjct: 41999640 caaatgcttttacggctagttctggcttgttgatgaagtgaagatctaaaaataccccga 41999699

                                                         
Query: 369      cttgccggagatggtactgcgatctacctcctccaaagcca 409
                | || || ||||||||||| |||||||| ||||||||||||
Sbjct: 41999700 cctgacgaagatggtactgtgatctaccccctccaaagcca 41999740



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                           
Query: 332      ggcttgttgatgaaatgaagatctaagaacaccccgacttgcc 374
                ||||||||||||||||| |  || ||||| |||||||||||||
Sbjct: 42011515 ggcttgttgatgaaatggatgtccaagaaaaccccgacttgcc 42011473



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 269      tcaatcaaatttccatcgctgtcgaa 294
                ||||||||||| ||||||||||||||
Sbjct: 42011578 tcaatcaaattgccatcgctgtcgaa 42011553

---

>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0431G06
          Length = 140466

 Score =  153 bits (77), Expect = 5e-34
 Identities = 185/221 (83%)
 Strand = Plus / Plus

                                                                          
Query: 189    ttcaatccttattctggatcctgagtgtgaaggcctggagggacaaaagcactttcttga 248
              ||||||| || || |||| |||||||||||| ||||| ||||| || || |||| |||||
Sbjct: 101597 ttcaatctttcttttggagcctgagtgtgaaagcctgaagggataagagaacttgcttga 101656

                                                                          
Query: 249    tccgctctctgatctcagcgtcaatcaaatttccatcgctgtcgaacttggggggctgct 308
              |||| |||||||| |  || ||||||||||| ||||| ||||| ||||| || |||||||
Sbjct: 101657 tccgttctctgatttgcgcatcaatcaaattaccatcactgtcaaactttggaggctgct 101716

                                                                          
Query: 309    gaaatgcttggacaaacagctctggcttgttgatgaaatgaagatctaagaacaccccga 368
               ||||||||  ||    || ||||||||||||||||| ||||||||||| || |||||||
Sbjct: 101717 caaatgcttttacggctagttctggcttgttgatgaagtgaagatctaaaaataccccga 101776

                                                       
Query: 369    cttgccggagatggtactgcgatctacctcctccaaagcca 409
              | || || ||||||||||| |||||||| ||||||||||||
Sbjct: 101777 cctgacgaagatggtactgtgatctaccccctccaaagcca 101817



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 332    ggcttgttgatgaaatgaagatctaagaacaccccgacttgcc 374
              ||||||||||||||||| |  || ||||| |||||||||||||
Sbjct: 113592 ggcttgttgatgaaatggatgtccaagaaaaccccgacttgcc 113550



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 269    tcaatcaaatttccatcgctgtcgaa 294
              ||||||||||| ||||||||||||||
Sbjct: 113655 tcaatcaaattgccatcgctgtcgaa 113630

---

>dbj|AK071823.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120I15, full
           insert sequence
          Length = 956

 Score =  153 bits (77), Expect = 5e-34
 Identities = 185/221 (83%)
 Strand = Plus / Minus

                                                                       
Query: 189 ttcaatccttattctggatcctgagtgtgaaggcctggagggacaaaagcactttcttga 248
           ||||||| || || |||| |||||||||||| ||||| ||||| || || |||| | |||
Sbjct: 727 ttcaatctttcttttggagcctgagtgtgaaagcctgaagggataagagaacttgcctga 668

                                                                       
Query: 249 tccgctctctgatctcagcgtcaatcaaatttccatcgctgtcgaacttggggggctgct 308
           |||| |||||||| |  || ||||||||||| ||||| ||||| ||||| || |||||||
Sbjct: 667 tccgttctctgatttgcgcatcaatcaaattaccatcactgtcaaactttggaggctgct 608

                                                                       
Query: 309 gaaatgcttggacaaacagctctggcttgttgatgaaatgaagatctaagaacaccccga 368
            ||||||||  ||    || ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 607 caaatgcttttacggctagttctggcttgttgatgaagtgaagatctaaaaacaccccga 548

                                                    
Query: 369 cttgccggagatggtactgcgatctacctcctccaaagcca 409
           | || || ||||||||||| |||||||| ||||||||||||
Sbjct: 547 cctgacgaagatggtactgtgatctaccccctccaaagcca 507

---

>ref|NM_189782.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 594

 Score =  151 bits (76), Expect = 2e-33
 Identities = 184/220 (83%)
 Strand = Plus / Minus

                                                                       
Query: 190 tcaatccttattctggatcctgagtgtgaaggcctggagggacaaaagcactttcttgat 249
           |||||| || || |||| |||||||||||| ||||| ||||| || || |||| ||||||
Sbjct: 594 tcaatctttcttttggagcctgagtgtgaaagcctgaagggataagagaacttgcttgat 535

                                                                       
Query: 250 ccgctctctgatctcagcgtcaatcaaatttccatcgctgtcgaacttggggggctgctg 309
           ||| |||||||| |  || ||||||||||| ||||| ||||| ||||| || ||||||| 
Sbjct: 534 ccgttctctgatttgcgcatcaatcaaattaccatcactgtcaaactttggaggctgctc 475

                                                                       
Query: 310 aaatgcttggacaaacagctctggcttgttgatgaaatgaagatctaagaacaccccgac 369
           ||||||||  ||    || ||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 474 aaatgcttttacggctagttctggcttgttgatgaagtgaagatctaaaaataccccgac 415

                                                   
Query: 370 ttgccggagatggtactgcgatctacctcctccaaagcca 409
            || || ||||||||||| |||||||| ||||||||||||
Sbjct: 414 ctgacgaagatggtactgtgatctaccccctccaaagcca 375

---

>dbj|AK100697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114J09, full
           insert sequence
          Length = 3015

 Score =  145 bits (73), Expect = 1e-31
 Identities = 184/221 (83%)
 Strand = Plus / Minus

                                                                       
Query: 189 ttcaatccttattctggatcctgagtgtgaaggcctggagggacaaaagcactttcttga 248
           ||||||| || || |||| |||||||||||| ||||| ||||  || || |||| |||||
Sbjct: 688 ttcaatctttcttttggagcctgagtgtgaaagcctgaaggggtaagagaacttgcttga 629

                                                                       
Query: 249 tccgctctctgatctcagcgtcaatcaaatttccatcgctgtcgaacttggggggctgct 308
           |||| |||||||| |  || ||||||||||| ||||| ||||| ||||| || |||||||
Sbjct: 628 tccgttctctgatttgcgcatcaatcaaattaccatcactgtcaaactttggaggctgct 569

                                                                       
Query: 309 gaaatgcttggacaaacagctctggcttgttgatgaaatgaagatctaagaacaccccga 368
            ||||||||  ||    || ||||||||||||||||| ||||||||||| || |||||||
Sbjct: 568 caaatgcttttacggctagttctggcttgttgatgaagtgaagatctaaaaataccccga 509

                                                    
Query: 369 cttgccggagatggtactgcgatctacctcctccaaagcca 409
           | || || ||||||||||| |||||||| ||||||||||||
Sbjct: 508 cctgacgaagatggtactgtgatctaccccctccaaagcca 468

---

>ref|NM_113705.2| Arabidopsis thaliana NQR (NADPH:QUINONE OXIDOREDUCTASE); FMN
           reductase AT3G27890 (NQR) mRNA, complete cds
          Length = 773

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                       
Query: 335 ttgttgatgaaatgaagatctaagaacaccccgacttgccggagatggtactgcgatcta 394
           |||||||||||||||||||| | ||| || |||| ||| || ||||||||||||||||| 
Sbjct: 480 ttgttgatgaaatgaagatcaaggaagactccgatttgtcgaagatggtactgcgatctt 421

                      
Query: 395 cctcctccaaa 405
           ||||| |||||
Sbjct: 420 cctccaccaaa 410

---

>gb|BT024581.1| Arabidopsis thaliana At3g27890 mRNA, complete cds
          Length = 591

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                       
Query: 335 ttgttgatgaaatgaagatctaagaacaccccgacttgccggagatggtactgcgatcta 394
           |||||||||||||||||||| | ||| || |||| ||| || ||||||||||||||||| 
Sbjct: 449 ttgttgatgaaatgaagatcaaggaagactccgatttgtcgaagatggtactgcgatctt 390

                      
Query: 395 cctcctccaaa 405
           ||||| |||||
Sbjct: 389 cctccaccaaa 379

---

>emb|BX826086.1|CNS0A6DG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL83ZH07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 714

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                       
Query: 335 ttgttgatgaaatgaagatctaagaacaccccgacttgccggagatggtactgcgatcta 394
           |||||||||||||||||||| | ||| || |||| ||| || ||||||||||||||||| 
Sbjct: 443 ttgttgatgaaatgaagatcaaggaagactccgatttgtcgaagatggtactgcgatctt 384

                      
Query: 395 cctcctccaaa 405
           ||||| |||||
Sbjct: 383 cctccaccaaa 373

---

>dbj|AP000371.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K16N12
          Length = 58864

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                         
Query: 335   ttgttgatgaaatgaagatctaagaacaccccgacttgccggagatggtactgcgatcta 394
             |||||||||||||||||||| | ||| || |||| ||| || ||||||||||||||||| 
Sbjct: 41108 ttgttgatgaaatgaagatcaaggaagactccgatttgtcgaagatggtactgcgatctt 41167

                        
Query: 395   cctcctccaaa 405
             ||||| |||||
Sbjct: 41168 cctccaccaaa 41178

---

>gb|AF145234.1|AF145234 Arabidopsis thaliana NADPH:quinone oxidoreductase (NQR) mRNA,
           complete cds
          Length = 782

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                       
Query: 335 ttgttgatgaaatgaagatctaagaacaccccgacttgccggagatggtactgcgatcta 394
           |||||||||||||||||||| | ||| || |||| ||| || ||||||||||||||||| 
Sbjct: 487 ttgttgatgaaatgaagatcaaggaagactccgatttgtcgaagatggtactgcgatctt 428

                      
Query: 395 cctcctccaaa 405
           ||||| |||||
Sbjct: 427 cctccaccaaa 417

---

>ref|NM_189784.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 612

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 332 ggcttgttgatgaaatgaagatctaagaacaccccgacttgcc 374
           ||||||||||||||||| |  || ||||| |||||||||||||
Sbjct: 449 ggcttgttgatgaaatggatgtccaagaaaaccccgacttgcc 407



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 269 tcaatcaaatttccatcgctgtcgaa 294
           ||||||||||| ||||||||||||||
Sbjct: 512 tcaatcaaattgccatcgctgtcgaa 487

---

>dbj|AK062729.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-E03, full
           insert sequence
          Length = 764

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 332 ggcttgttgatgaaatgaagatctaagaacaccccgacttgcc 374
           ||||||||||||||||| |  || ||||| |||||||||||||
Sbjct: 477 ggcttgttgatgaaatggatgtccaagaaaaccccgacttgcc 435



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 269 tcaatcaaatttccatcgctgtcgaa 294
           ||||||||||| ||||||||||||||
Sbjct: 540 tcaatcaaattgccatcgctgtcgaa 515

---

>gb|AC159313.3| Mus musculus BAC clone RP23-99D11 from chromosome 9, complete sequence
          Length = 228299

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 79    gaatctgaatgggaagtaaaaatgtc 104
             |||||| |||||||||||||||||||
Sbjct: 71263 gaatcttaatgggaagtaaaaatgtc 71238

---

>emb|AL671545.13| Human DNA sequence from clone CITF22-53E7 on chromosome 22, complete
            sequence
          Length = 27547

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 210  tgagtgtgaaggcctggaggga 231
            ||||||||||||||||||||||
Sbjct: 6806 tgagtgtgaaggcctggaggga 6827



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 211  gagtgtgaaggcctggaggga 231
            |||||||||||||||||||||
Sbjct: 7060 gagtgtgaaggcctggaggga 7080

---

>emb|AL009174.1|HS417G15 Human DNA sequence from clone RP3-417G15 on chromosome Xq25-26 Contains
             a ribosomal protein S24 (RPS24) pseudogene, part of the
             GPC3 gene for glypican 3 and a laminin receptor 1
             (ribosomal protein SA, 67kDa) (LAMR1) pseudogene, complete
             sequence
          Length = 124321

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 137   agcacaaataaccaaagtaaaaaata 162
             ||||||||||||||||| ||||||||
Sbjct: 55872 agcacaaataaccaaagcaaaaaata 55897

---

>gb|BC077326.1| Xenopus laevis tyrosine phosphatase, mRNA (cDNA clone MGC:80294
            IMAGE:5073627), complete cds
          Length = 2686

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 46   tacagatttcattctgcagacaaca 70
            |||||| ||||||||||||||||||
Sbjct: 2460 tacagaattcattctgcagacaaca 2436

---

>ref|XM_530048.1| PREDICTED: Pan troglodytes LOC456113 (LOC456113), mRNA
          Length = 495

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  acaaacagcagagcagcaga 40
           ||||||||||||||||||||
Sbjct: 147 acaaacagcagagcagcaga 128

---

>gb|AC151913.1| Pan troglodytes chromosome X clone RP43-057B02 map human ortholog
             q26.2, complete sequence
          Length = 173886

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 137   agcacaaataaccaaagtaaaaaa 160
             ||||||||||||||||| ||||||
Sbjct: 25452 agcacaaataaccaaagcaaaaaa 25475

---

>gb|AC006334.3| Homo sapiens BAC clone RP11-421B22 from 7, complete sequence
          Length = 141899

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 139   cacaaataaccaaagtaaaaaata 162
             ||||||||||||||| ||||||||
Sbjct: 97304 cacaaataaccaaagaaaaaaata 97281

---

>gb|AC145968.3| Pan troglodytes BAC clone RP43-12H15 from 7, complete sequence
          Length = 192898

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 139  cacaaataaccaaagtaaaaaata 162
            ||||||||||||||| ||||||||
Sbjct: 9098 cacaaataaccaaagaaaaaaata 9075

---

>gb|AC073330.6| Homo sapiens BAC clone RP11-409J21 from 7, complete sequence
          Length = 155704

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 139   cacaaataaccaaagtaaaaaata 162
             ||||||||||||||| ||||||||
Sbjct: 35010 cacaaataaccaaagaaaaaaata 34987

---

>gb|AC130808.36| Medicago truncatula clone mth2-34k9, complete sequence
          Length = 113091

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 338  ttgatgaaatgaagatctaagaacaccccgacttgccggagatg 381
            ||||||||||||| ||| | ||| ||||||| ||| ||||||||
Sbjct: 6008 ttgatgaaatgaatatcaaggaaaaccccgatttggcggagatg 5965

---

>emb|AL356956.11| Human DNA sequence from clone RP11-538A16 on chromosome 6 Contains an
              activating transcription factor 1 (ATF1) pseudogene,
              complete sequence
          Length = 194264

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    caaataaccaaagtaaaaaa 160
              ||||||||||||||||||||
Sbjct: 187676 caaataaccaaagtaaaaaa 187695

---

>emb|AL589699.4| Mouse DNA sequence from clone RP23-92G13 on chromosome 13 Contains the 3'
              end of the gene for a novel protein similar to KIAA0386,
              five novel genes, the Gmnn gene for geminin, gene PNAS-27,
              the Ttrap gene for Traf and Tnf receptor associated
              protein, the gene for a novel protein similar to KIAA0319,
              the gene for the ortholog of human and rat aldehyde
              dehydrogenase 5A1 (succinate-semialdehyde dehydrogenase)
              (ALDH5A1) (SSADH), the 5' end of the Gpld1 gene for
              glycosylphosphatidylinositol specific phospholipase D1 and
              four CpG islands, complete sequence
          Length = 256608

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     aaccctccacaaacagcaga 32
              ||||||||||||||||||||
Sbjct: 183352 aaccctccacaaacagcaga 183371

---

>gb|AC098964.4| Homo sapiens chromosome 8 clone RP11-141M14 map 8p21-p11, complete
             sequence
          Length = 151646

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 17    ctccacaaacagcagagcagcaga 40
             |||||||| |||||||||||||||
Sbjct: 32593 ctccacaagcagcagagcagcaga 32570

---

>gb|AC092066.4| Homo sapiens chromosome 19 clone CTB-171A8, complete sequence
          Length = 137411

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   acaaacagcagagcagcaga 40
            ||||||||||||||||||||
Sbjct: 2403 acaaacagcagagcagcaga 2384

---

>gb|AF279873.4| Homo sapiens chromosome 8 clone RP1-25D10, RP1-273G13, RP1-103E7 map
              8p21-p11, complete sequence
          Length = 301232

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 17     ctccacaaacagcagagcagcaga 40
              |||||||| |||||||||||||||
Sbjct: 240044 ctccacaagcagcagagcagcaga 240021

---

>gb|AC099845.2| Homo sapiens chromosome 18, clone RP11-812D21, complete sequence
          Length = 189559

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 17    ctccacaaacagcagagcagcaga 40
             |||||||| |||||||||||||||
Sbjct: 33395 ctccacaagcagcagagcagcaga 33418

---

>gb|AC182361.3| Spermophilus tridecemlineatus clone VMRC20-433G18, complete sequence
          Length = 140138

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   tgttgatgaaatgaagatct 355
             ||||||||||||||||||||
Sbjct: 33486 tgttgatgaaatgaagatct 33505

---

>gb|AC009078.6| Homo sapiens chromosome 16 clone RP11-331F4, complete sequence
          Length = 176926

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 17    ctccacaaacagcagagcagcaga 40
             |||||||||||| |||||||||||
Sbjct: 44956 ctccacaaacagaagagcagcaga 44979

---

>gb|AC105218.4| Homo sapiens chromosome 8, clone RP11-410F13, complete sequence
          Length = 138416

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 225    ggagggacaaaagcactttcttga 248
              |||| |||||||||||||||||||
Sbjct: 137701 ggagtgacaaaagcactttcttga 137724

---

>gb|AC008426.4| Homo sapiens chromosome 5 clone CTC-307A7, complete sequence
          Length = 150870

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   accaaagtaaaaaatatgca 166
             ||||||||||||||||||||
Sbjct: 81396 accaaagtaaaaaatatgca 81377

---

>gb|S47891.1| XSTK2=activin receptor [Xenopus laevis, mRNA, 1467 nt]
          Length = 1467

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   agcagatttattacagattt 54
            ||||||||||||||||||||
Sbjct: 1432 agcagatttattacagattt 1413

---

>gb|AC022274.5|AC022274 Homo sapiens BAC clone RP11-697M17 from 8, complete sequence
          Length = 190701

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 225    ggagggacaaaagcactttcttga 248
              |||| |||||||||||||||||||
Sbjct: 163731 ggagtgacaaaagcactttcttga 163708

---

>gb|AC129935.8| Mus musculus chromosome 15, clone RP23-269P8, complete sequence
          Length = 183894

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     atttattacagatttcattc 59
              ||||||||||||||||||||
Sbjct: 160786 atttattacagatttcattc 160767

---

>gb|AC099508.3| Homo sapiens chromosome 16 clone RP11-252E2, complete sequence
          Length = 162291

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 17     ctccacaaacagcagagcagcaga 40
              |||||||||||| |||||||||||
Sbjct: 138042 ctccacaaacagaagagcagcaga 138065

---

>gb|AC009452.21| Homo sapiens chromosome 17, clone RP11-4F22, complete sequence
          Length = 176069

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    cctgagtgtgaaggcctgga 227
              ||||||||||||||||||||
Sbjct: 170788 cctgagtgtgaaggcctgga 170769

---

>gb|AC006343.3| Homo sapiens PAC clone RP4-548K24 from 7q34-q36, complete sequence
          Length = 124877

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 137    agcacaaataaccaaagtaaaaaa 160
              ||||||||||||||||| ||||||
Sbjct: 115486 agcacaaataaccaaagaaaaaaa 115509

---

>gb|AY948960.1| Homo sapiens amiloride-binding protein 1 (amine oxidase
           (copper-containing)) (ABP1) gene, complete cds
          Length = 12696

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 137 agcacaaataaccaaagtaaaaaa 160
           ||||||||||||||||| ||||||
Sbjct: 554 agcacaaataaccaaagaaaaaaa 531

---

>gb|AC068948.1|AC068948 Homo sapiens chromosome 19, cosmid R28371 (LLNL-R_244D7), complete
             sequence
          Length = 35922

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    acaaacagcagagcagcaga 40
             ||||||||||||||||||||
Sbjct: 34330 acaaacagcagagcagcaga 34311

---

>dbj|AK098812.1| Homo sapiens cDNA FLJ25946 fis, clone JTH14258
          Length = 2027

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   acaaacagcagagcagcaga 40
            ||||||||||||||||||||
Sbjct: 1593 acaaacagcagagcagcaga 1574

---

>gb|AC006120.1|AC006120 Homo sapiens chromosome 17, clone hRPK.346_K_10, complete sequence
          Length = 168753

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  cctgagtgtgaaggcctgga 227
            ||||||||||||||||||||
Sbjct: 9232 cctgagtgtgaaggcctgga 9213

---

>ref|NM_019275.1| Rattus norvegicus MAD homolog 4 (Drosophila) (Smad4), mRNA
          Length = 3041

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   attctgcagacaacacatca 75
            ||||||||||||||||||||
Sbjct: 2139 attctgcagacaacacatca 2120

---

>gb|AF056002.1|AF056002 Rattus norvegicus Smad4 protein (Smad4) mRNA, complete cds
          Length = 3041

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   attctgcagacaacacatca 75
            ||||||||||||||||||||
Sbjct: 2139 attctgcagacaacacatca 2120

---

>emb|AL772223.7| Mouse DNA sequence from clone RP23-372J10 on chromosome 4, complete
            sequence
          Length = 211954

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 341  atgaaatgaagatctaagaa 360
            ||||||||||||||||||||
Sbjct: 1539 atgaaatgaagatctaagaa 1558

---

>emb|AL935179.6| Mouse DNA sequence from clone RP24-70H3 on chromosome 4, complete
             sequence
          Length = 56870

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   atgaaatgaagatctaagaa 360
             ||||||||||||||||||||
Sbjct: 56409 atgaaatgaagatctaagaa 56428

---

>emb|AL833787.8| Mouse DNA sequence from clone RP23-228E2 on chromosome 2, complete
             sequence
          Length = 237055

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   gagggacaaaagcactttct 245
             ||||||||||||||||||||
Sbjct: 20588 gagggacaaaagcactttct 20569


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,547,954
Number of Sequences: 3902068
Number of extensions: 4547954
Number of successful extensions: 99598
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99472
Number of HSP's gapped (non-prelim): 126
length of query: 409
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 387
effective length of database: 17,147,199,772
effective search space: 6635966311764
effective search space used: 6635966311764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---