ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet100c10 |
|---|---|
| Clone Library Name | barley_pub |
>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)| Length = 273 Score = 115 bits (287), Expect = 9e-26 Identities = 55/71 (77%), Positives = 63/71 (88%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 GVD LE LFSEQGKV+DAKV+YDRDSGRSRGFGFVTY SA+EVNNAI +LDGVDL+GR Sbjct: 198 GVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGR 257 Query: 319 QIRVTVAESKP 287 IRV+ AE++P Sbjct: 258 AIRVSPAEARP 268 Score = 63.5 bits (153), Expect = 3e-10 Identities = 34/73 (46%), Positives = 44/73 (60%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D++ L LF G V +VIYD+ +GRSRGFGFVT S +EV A +G +LDGR + Sbjct: 99 DSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRAL 158 Query: 313 RVTVAESKPREQR 275 RV P E+R Sbjct: 159 RVN--SGPPPEKR 169
>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)| Length = 279 Score = 115 bits (287), Expect = 9e-26 Identities = 55/71 (77%), Positives = 63/71 (88%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 GVD LE LFSEQGKV+DAKV+YDRDSGRSRGFGFVTY SA+EVNNAI +LDGVDL+GR Sbjct: 204 GVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGR 263 Query: 319 QIRVTVAESKP 287 IRV+ AE++P Sbjct: 264 AIRVSPAEARP 274 Score = 63.5 bits (153), Expect = 3e-10 Identities = 34/73 (46%), Positives = 44/73 (60%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D++ L LF G V +VIYD+ +GRSRGFGFVT S +EV A +G +LDGR + Sbjct: 99 DSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRAL 158 Query: 313 RVTVAESKPREQR 275 RV P E+R Sbjct: 159 RVN--SGPPPEKR 169
>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)| Length = 292 Score = 112 bits (280), Expect = 6e-25 Identities = 53/74 (71%), Positives = 63/74 (85%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 GVD+ L+ LFSEQG V+DAKV+YDRDSGRSRGFGFVTY SA EVN+AI +L+G+DLDGR Sbjct: 218 GVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGR 277 Query: 319 QIRVTVAESKPREQ 278 IRV+ AE +PR Q Sbjct: 278 SIRVSAAEERPRRQ 291 Score = 64.3 bits (155), Expect = 2e-10 Identities = 32/73 (43%), Positives = 44/73 (60%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VD++ L LF G V +VIYD+ SGRSRGFGFVT + +EV A +G ++DGR Sbjct: 99 VDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRA 158 Query: 316 IRVTVAESKPREQ 278 IRV + + + Sbjct: 159 IRVNAGPAPAKRE 171
>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)| Length = 291 Score = 111 bits (278), Expect = 9e-25 Identities = 53/74 (71%), Positives = 63/74 (85%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 GVD+ L+ LFSEQG V+DAKV+YDRDSGRSRGFGFVTY S+ EVN+AI +L+GVDLDGR Sbjct: 217 GVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGR 276 Query: 319 QIRVTVAESKPREQ 278 IRV+ AE +PR Q Sbjct: 277 SIRVSAAEERPRRQ 290 Score = 63.2 bits (152), Expect = 4e-10 Identities = 31/73 (42%), Positives = 44/73 (60%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VD++ L LF G V +VIYD+ +GRSRGFGFVT + +EV A +G ++DGR Sbjct: 98 VDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRA 157 Query: 316 IRVTVAESKPREQ 278 IRV + + + Sbjct: 158 IRVNAGPAPAKRE 170
>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast| precursor Length = 289 Score = 110 bits (274), Expect = 3e-24 Identities = 52/71 (73%), Positives = 63/71 (88%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 GVD+ LE+LFSEQGKV++A+VIYDRDSGRS+GFGFVTY S+ EV NAI +LDG DLDGR Sbjct: 214 GVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGR 273 Query: 319 QIRVTVAESKP 287 QIRV+ AE++P Sbjct: 274 QIRVSEAEARP 284 Score = 67.8 bits (164), Expect = 2e-11 Identities = 34/76 (44%), Positives = 44/76 (57%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VD++ L LF G V +VIYD+ +GRSRGFGFVT S EV A +G +LDGR Sbjct: 102 VDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRP 161 Query: 316 IRVTVAESKPREQRRF 269 +RV P+ + F Sbjct: 162 LRVNAGPPPPKREDGF 177
>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein cp29) Length = 342 Score = 104 bits (259), Expect = 2e-22 Identities = 49/71 (69%), Positives = 62/71 (87%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 GVD+ LENLF+EQGKV++A+VIYDRDSGRS+GFGFVT S+ EV AI++L+G DLDGR Sbjct: 267 GVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGR 326 Query: 319 QIRVTVAESKP 287 QIRV+ AE++P Sbjct: 327 QIRVSEAEARP 337 Score = 65.5 bits (158), Expect = 8e-11 Identities = 32/76 (42%), Positives = 44/76 (57%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VD++ L LF G V +VIYD+ +GRSRGFGFVT +A EV A +G + +GR Sbjct: 110 VDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRP 169 Query: 316 IRVTVAESKPREQRRF 269 +RV P+ + F Sbjct: 170 LRVNAGPPPPKREESF 185
>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) Length = 329 Score = 97.4 bits (241), Expect = 2e-20 Identities = 46/70 (65%), Positives = 56/70 (80%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VDN LE LFSE GKV++A+V+YDR++GRSRGFGFVT DE+N AIS LDG +L+GR Sbjct: 255 VDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRA 314 Query: 316 IRVTVAESKP 287 IRV VAE +P Sbjct: 315 IRVNVAEERP 324 Score = 59.7 bits (143), Expect = 4e-09 Identities = 32/74 (43%), Positives = 46/74 (62%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V++ L LF + G V A+VIY+R++ +SRGFGFVT S DE A+ + DL+GR Sbjct: 161 VNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRL 220 Query: 316 IRVTVAESKPREQR 275 + TV ++ PR R Sbjct: 221 L--TVNKAAPRGSR 232
>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor| Length = 315 Score = 95.5 bits (236), Expect = 7e-20 Identities = 45/72 (62%), Positives = 58/72 (80%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 G+D++ LE LFSE GKV+ A+V+YDR++GRSRGFGFVT S E+++AI+NLDG LDGR Sbjct: 240 GIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGR 299 Query: 319 QIRVTVAESKPR 284 IRV VAE + R Sbjct: 300 TIRVNVAEDRSR 311 Score = 56.6 bits (135), Expect = 4e-08 Identities = 29/75 (38%), Positives = 43/75 (57%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VD+ L LF + G V A+VIY+RD+ +SRGFGFVT + +E A+ + D++GR Sbjct: 147 VDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRL 206 Query: 316 IRVTVAESKPREQRR 272 + V A + R Sbjct: 207 LTVNKAARRGERPER 221
>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)| Length = 233 Score = 94.0 bits (232), Expect = 2e-19 Identities = 46/71 (64%), Positives = 55/71 (77%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VD S LE LFSE GKV+ A+V+ DR++GRSRGFGFVT S EVN+AI+ LDG LDGR Sbjct: 160 VDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRA 219 Query: 316 IRVTVAESKPR 284 +RV VAE +PR Sbjct: 220 VRVNVAEERPR 230 Score = 65.1 bits (157), Expect = 1e-10 Identities = 32/74 (43%), Positives = 46/74 (62%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VD+ L +F G V A+VIY+R++ RSRGFGFVT + +E A+ L+G D+DGRQ Sbjct: 66 VDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQ 125 Query: 316 IRVTVAESKPREQR 275 + V A + +R Sbjct: 126 LTVNKAAPRGSPER 139
>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)| Length = 276 Score = 92.4 bits (228), Expect = 6e-19 Identities = 43/71 (60%), Positives = 56/71 (78%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D++ LE +FSE GKV+ A+V++DR+SGRSRGFGFVT S E++ AI+NLDG LDGR Sbjct: 202 IDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRT 261 Query: 316 IRVTVAESKPR 284 IRV AE +PR Sbjct: 262 IRVNAAEERPR 272 Score = 58.2 bits (139), Expect = 1e-08 Identities = 31/74 (41%), Positives = 46/74 (62%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L LF + G V A+VIY+R++ RSRGFGFVT + +E + A+ DL+GR Sbjct: 108 IDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRL 167 Query: 316 IRVTVAESKPREQR 275 + TV ++ PR R Sbjct: 168 L--TVNKAAPRGSR 179
>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein| Length = 157 Score = 79.0 bits (193), Expect = 7e-15 Identities = 36/67 (53%), Positives = 52/67 (77%) Frame = -2 Query: 490 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIR 311 N +LEN F+ G++LD+KVI DR++GRSRGFGFVT+ S + + +AI N++G +LDGR I Sbjct: 21 NESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNIT 80 Query: 310 VTVAESK 290 V A+S+ Sbjct: 81 VNQAQSR 87
>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2| Length = 168 Score = 77.0 bits (188), Expect = 3e-14 Identities = 36/68 (52%), Positives = 51/68 (75%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 +N TLE F+ G+V+D+KVI DR++GRSRGFGFVT+ S + +AI N++G +LDGR I Sbjct: 20 NNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNI 79 Query: 313 RVTVAESK 290 V A+S+ Sbjct: 80 TVNQAQSR 87
>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial| precursor (AtGRP2) Length = 158 Score = 75.9 bits (185), Expect = 6e-14 Identities = 36/77 (46%), Positives = 50/77 (64%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 G D+++L + F+ G V+DAKVI DR++GRSRGFGFV + AIS +DG +L+GR Sbjct: 45 GTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGR 104 Query: 319 QIRVTVAESKPREQRRF 269 IRV A +P R + Sbjct: 105 HIRVNPANDRPSAPRAY 121
>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A| Length = 166 Score = 75.5 bits (184), Expect = 8e-14 Identities = 35/68 (51%), Positives = 49/68 (72%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D+ LE FS+ G+VLD+K+I DR++GRSRGFGFVT+ + +AI ++G DLDGR I Sbjct: 20 DDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSI 79 Query: 313 RVTVAESK 290 V A+S+ Sbjct: 80 TVNEAQSR 87
>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A| Length = 169 Score = 72.4 bits (176), Expect = 6e-13 Identities = 33/68 (48%), Positives = 49/68 (72%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D +LE FS+ G+++D+K+I DR++GRSRGFGFVT+ + +AI ++G DLDGR I Sbjct: 20 DERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSI 79 Query: 313 RVTVAESK 290 V A+S+ Sbjct: 80 TVNEAQSR 87
>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7| Length = 176 Score = 72.4 bits (176), Expect = 6e-13 Identities = 33/68 (48%), Positives = 48/68 (70%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D+ LE F++ G V+D+K+I DR++GRSRGFGFVT+ + +AI ++G DLDGR I Sbjct: 20 DDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSI 79 Query: 313 RVTVAESK 290 V A+S+ Sbjct: 80 TVNEAQSR 87
>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor| Length = 324 Score = 71.6 bits (174), Expect = 1e-12 Identities = 32/64 (50%), Positives = 48/64 (75%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L + F++Q + AKVIYDR SGRSRGFGF+T+ SA+ +N+A+ ++ V+L+GR +R+ V Sbjct: 233 LRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNV 292 Query: 301 AESK 290 A K Sbjct: 293 AGQK 296 Score = 60.5 bits (145), Expect = 3e-09 Identities = 28/65 (43%), Positives = 40/65 (61%) Frame = -2 Query: 490 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIR 311 +S L +F+E G V + +++YDR + RSRGF FVT GS +E AI DG + GR ++ Sbjct: 127 SSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVK 186 Query: 310 VTVAE 296 V E Sbjct: 187 VNFPE 191
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 70.1 bits (170), Expect = 3e-12 Identities = 32/67 (47%), Positives = 49/67 (73%) Frame = -2 Query: 490 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIR 311 ++ LE FS+ G+V+D+K+I DR++GRSRGFGFVT+ + +AI ++G +LDGR I Sbjct: 19 DAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTIT 78 Query: 310 VTVAESK 290 V A+S+ Sbjct: 79 VNEAQSR 85
>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein| Length = 157 Score = 68.9 bits (167), Expect = 7e-12 Identities = 31/68 (45%), Positives = 48/68 (70%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 ++ +LE FS+ G + D+K+I DR++GRSRGFGFVT+ + +AI ++G +LDGR I Sbjct: 18 NDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNI 77 Query: 313 RVTVAESK 290 V A+S+ Sbjct: 78 TVNEAQSR 85
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)| Length = 169 Score = 68.6 bits (166), Expect = 9e-12 Identities = 32/68 (47%), Positives = 48/68 (70%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 ++ L+ FS+ G V+D+K+I DR+SGRSRGFGFVT+ + +AI ++G +LDGR I Sbjct: 18 NDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVI 77 Query: 313 RVTVAESK 290 V A+S+ Sbjct: 78 TVNEAQSR 85
>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)| Length = 142 Score = 67.4 bits (163), Expect = 2e-11 Identities = 30/66 (45%), Positives = 49/66 (74%) Frame = -2 Query: 487 STLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 ++L + FS G+VL++K+I DR++ RSRGFGFVT+ + + + +AI ++G +LDGR I V Sbjct: 1 NSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITV 60 Query: 307 TVAESK 290 A+S+ Sbjct: 61 NEAQSR 66
>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic| poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A) Length = 629 Score = 63.5 bits (153), Expect = 3e-10 Identities = 32/73 (43%), Positives = 46/73 (63%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L +FS G L KV+ D DSGRSRGFGFV YG+ +E A+S ++G +++GR Sbjct: 202 MDDKRLREIFSAFGNTLSVKVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRM 260 Query: 316 IRVTVAESKPREQ 278 I V A+ + Q Sbjct: 261 IYVGRAQKRIERQ 273 Score = 46.6 bits (109), Expect = 4e-05 Identities = 27/74 (36%), Positives = 41/74 (55%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L + FS G +L KV+ D SRG+GFV + + + N AI ++G+ L+ R Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETHEAANRAIQTMNGMLLNDR- 166 Query: 316 IRVTVAESKPREQR 275 +V V K R +R Sbjct: 167 -KVFVGHFKSRRER 179 Score = 45.4 bits (106), Expect = 8e-05 Identities = 24/76 (31%), Positives = 43/76 (56%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 G+D+ L F G + AKV+ + G S+GFGFV + S +E A++ ++G + + Sbjct: 304 GIDDDRLRKEFLPYGTITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTK 361 Query: 319 QIRVTVAESKPREQRR 272 + V +A+ K E+R+ Sbjct: 362 PLYVALAQRK--EERK 375
>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (xCIRP) Length = 163 Score = 62.8 bits (151), Expect = 5e-10 Identities = 29/69 (42%), Positives = 46/69 (66%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 LE F++ G++ + V+ DR++ RSRGFGFVT+ + D+ +A+ ++G +DGRQIRV Sbjct: 21 LEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAMNGKSVDGRQIRVDQ 80 Query: 301 AESKPREQR 275 A E+R Sbjct: 81 AGKSSGERR 89
>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)| binding protein) (ePABP) Length = 629 Score = 62.4 bits (150), Expect = 7e-10 Identities = 31/73 (42%), Positives = 46/73 (63%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L +FS G L KV+ D D+GRSRGFGFV YG+ +E A+S ++G +++GR Sbjct: 202 MDDKRLREIFSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRM 260 Query: 316 IRVTVAESKPREQ 278 I V A+ + Q Sbjct: 261 IYVGRAQKRIERQ 273 Score = 47.8 bits (112), Expect = 2e-05 Identities = 25/76 (32%), Positives = 44/76 (57%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 G+D+ L FS G + AKV+ + G S+GFGFV + S +E A++ ++G + + Sbjct: 304 GIDDDRLRKEFSPYGTITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTK 361 Query: 319 QIRVTVAESKPREQRR 272 + V +A+ K E+R+ Sbjct: 362 PLYVALAQRK--EERK 375 Score = 47.0 bits (110), Expect = 3e-05 Identities = 27/74 (36%), Positives = 41/74 (55%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L + FS G +L KV+ D SRG+GFV + + + N AI ++G+ L+ R Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETQEAANRAIQTMNGMLLNDR- 166 Query: 316 IRVTVAESKPREQR 275 +V V K R +R Sbjct: 167 -KVFVGHFKSRRER 179
>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) Length = 172 Score = 62.4 bits (150), Expect = 7e-10 Identities = 28/65 (43%), Positives = 46/65 (70%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 + +LE +FS+ G++ + V+ DR++ RSRGFGFVT+ + D+ +A+ ++G +DGRQI Sbjct: 18 NEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77 Query: 313 RVTVA 299 RV A Sbjct: 78 RVDQA 82
>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 62.4 bits (150), Expect = 7e-10 Identities = 28/65 (43%), Positives = 46/65 (70%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 + +LE +FS+ G++ + V+ DR++ RSRGFGFVT+ + D+ +A+ ++G +DGRQI Sbjct: 18 NEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77 Query: 313 RVTVA 299 RV A Sbjct: 78 RVDQA 82
>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 62.0 bits (149), Expect = 9e-10 Identities = 28/65 (43%), Positives = 45/65 (69%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 + LE +FS+ G++ + V+ DR++ RSRGFGFVT+ + D+ +A+ ++G +DGRQI Sbjct: 18 NEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77 Query: 313 RVTVA 299 RV A Sbjct: 78 RVDQA 82
>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 62.0 bits (149), Expect = 9e-10 Identities = 28/65 (43%), Positives = 45/65 (69%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 + LE +FS+ G++ + V+ DR++ RSRGFGFVT+ + D+ +A+ ++G +DGRQI Sbjct: 18 NEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77 Query: 313 RVTVA 299 RV A Sbjct: 78 RVDQA 82
>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 62.0 bits (149), Expect = 9e-10 Identities = 28/65 (43%), Positives = 45/65 (69%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 + LE +FS+ G++ + V+ DR++ RSRGFGFVT+ + D+ +A+ ++G +DGRQI Sbjct: 18 NEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77 Query: 313 RVTVA 299 RV A Sbjct: 78 RVDQA 82
>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) Length = 153 Score = 61.2 bits (147), Expect = 1e-09 Identities = 30/73 (41%), Positives = 45/73 (61%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D LE+ FS G + + V+ DR++ RSRGFGF+T+ + + ++A+ ++G LDGRQI Sbjct: 18 DEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQI 77 Query: 313 RVTVAESKPREQR 275 RV A R R Sbjct: 78 RVDHAGKSARGSR 90
>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage| factor IB) (CFIB) Length = 534 Score = 60.8 bits (146), Expect = 2e-09 Identities = 29/68 (42%), Positives = 45/68 (66%) Frame = -2 Query: 478 ENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVA 299 E FS+ G ++DA+++ D+D+G+SRGFGFVTY SAD V+ N +D R+I + A Sbjct: 260 EEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN-KFIDFKDRKIEIKRA 318 Query: 298 ESKPREQR 275 E + +Q+ Sbjct: 319 EPRHMQQK 326 Score = 41.6 bits (96), Expect = 0.001 Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTY---GSADEVNNAISNLDGVDLDGRQ 317 L F + G V D K++ D +GRSRGFGF+++ S DEV LDG +D ++ Sbjct: 175 LREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKR 232
>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein| PUB1 (ARS consensus-binding protein ACBP-60) (Poly(U)-binding protein) (Poly uridylate-binding protein) Length = 452 Score = 60.8 bits (146), Expect = 2e-09 Identities = 27/69 (39%), Positives = 43/69 (62%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VD+ TL N F + L V++D +G SRG+GFV++ S D+ NA+ ++ G DL+GR Sbjct: 172 VDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRP 231 Query: 316 IRVTVAESK 290 +R+ A + Sbjct: 232 LRINWAAKR 240
>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic| poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B) Length = 629 Score = 60.5 bits (145), Expect = 3e-09 Identities = 29/73 (39%), Positives = 47/73 (64%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L+ +FS G L KV+ D +SGRSRGFGFV YG+ +E A++ ++G +++GR Sbjct: 202 MDDKRLKEIFSAFGNTLSVKVMMD-NSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRM 260 Query: 316 IRVTVAESKPREQ 278 + V A+ + Q Sbjct: 261 VYVGRAQKRIERQ 273 Score = 46.2 bits (108), Expect = 5e-05 Identities = 24/76 (31%), Positives = 43/76 (56%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 G+D+ L FS G + KV+ + G S+GFGFV + S +E A++ ++G + + Sbjct: 304 GIDDDRLRKEFSPYGTITSTKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTK 361 Query: 319 QIRVTVAESKPREQRR 272 + V +A+ K E+R+ Sbjct: 362 PLYVALAQRK--EERK 375 Score = 45.8 bits (107), Expect = 6e-05 Identities = 27/74 (36%), Positives = 41/74 (55%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L + FS G +L KV+ D SRG+GFV + + + N AI ++G+ L+ R Sbjct: 110 IDNKALYDTFSAFGDILSCKVVCDEYG--SRGYGFVHFETQEAANRAIQTMNGMLLNDR- 166 Query: 316 IRVTVAESKPREQR 275 +V V K R +R Sbjct: 167 -KVFVGHFKSRRER 179
>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor| Length = 212 Score = 60.1 bits (144), Expect = 3e-09 Identities = 30/71 (42%), Positives = 47/71 (66%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 G D +L++ FS V +A+V+ ++ +GRSRG+GFV + S D N+AIS ++G +L+G Sbjct: 41 GTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGF 100 Query: 319 QIRVTVAESKP 287 I V VA+ P Sbjct: 101 NISVNVAKDWP 111
>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) (RNPL) Length = 157 Score = 59.3 bits (142), Expect = 6e-09 Identities = 30/73 (41%), Positives = 44/73 (60%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D LE+ FS G + + V+ DR++ RSRGFGF+T+ + + + A+ ++G LDGRQI Sbjct: 18 DEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQI 77 Query: 313 RVTVAESKPREQR 275 RV A R R Sbjct: 78 RVDHAGKSARGTR 90
>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (RA301) Length = 288 Score = 58.9 bits (141), Expect = 7e-09 Identities = 26/64 (40%), Positives = 41/64 (64%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L +FS+ G + D ++YD+ S RSRGF FV + + D+ A +G++LDGR+IRV Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDF 193 Query: 301 AESK 290 + +K Sbjct: 194 SITK 197
>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (Silica-induced gene 41 protein) (SIG-41) Length = 288 Score = 58.9 bits (141), Expect = 7e-09 Identities = 26/64 (40%), Positives = 41/64 (64%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L +FS+ G + D ++YD+ S RSRGF FV + + D+ A +G++LDGR+IRV Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDF 193 Query: 301 AESK 290 + +K Sbjct: 194 SITK 197
>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) Length = 288 Score = 58.9 bits (141), Expect = 7e-09 Identities = 26/64 (40%), Positives = 41/64 (64%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L +FS+ G + D ++YD+ S RSRGF FV + + D+ A +G++LDGR+IRV Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDF 193 Query: 301 AESK 290 + +K Sbjct: 194 SITK 197
>SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2| Length = 991 Score = 58.9 bits (141), Expect = 7e-09 Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 4/79 (5%) Frame = -2 Query: 499 GVDNST----LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVD 332 G+ +ST L++LFS+ GKV+ AKV+ + S +R +GFVT ++DE IS+L + Sbjct: 457 GLSSSTRAADLKSLFSKHGKVIGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTE 516 Query: 331 LDGRQIRVTVAESKPREQR 275 L GR I V A+++P E++ Sbjct: 517 LHGRMISVEKAKNEPSEKK 535
>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein| 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein 1) (APP-1) Length = 644 Score = 58.5 bits (140), Expect = 1e-08 Identities = 29/73 (39%), Positives = 47/73 (64%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VD+ +L+ LFS+ GK L KV+ D +G+S+GFGFV+Y ++ N A+ ++G ++ G+ Sbjct: 202 VDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKI 260 Query: 316 IRVTVAESKPREQ 278 I V A+ K Q Sbjct: 261 IFVGRAQKKVERQ 273 Score = 47.4 bits (111), Expect = 2e-05 Identities = 25/75 (33%), Positives = 44/75 (58%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L FS G + AKV+ + GRS+GFGFV + S +E A++ ++G + + Sbjct: 305 IDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKP 362 Query: 316 IRVTVAESKPREQRR 272 + V +A+ K E+R+ Sbjct: 363 LYVALAQRK--EERK 375 Score = 42.7 bits (99), Expect = 5e-04 Identities = 24/74 (32%), Positives = 42/74 (56%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L + FS G +L KV+ D + S+G+ FV + + + + AI ++G+ L+ R Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDR- 166 Query: 316 IRVTVAESKPREQR 275 +V V K R++R Sbjct: 167 -KVFVGRFKSRKER 179
>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast| precursor (PSRP-2) Length = 260 Score = 58.5 bits (140), Expect = 1e-08 Identities = 29/72 (40%), Positives = 45/72 (62%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 ++N L + E G + A+V+YD+ SGRSR FGFVT + ++ N I L+ ++ GR+ Sbjct: 95 LNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRK 154 Query: 316 IRVTVAESKPRE 281 I+V + E KP E Sbjct: 155 IKVNITE-KPLE 165 Score = 57.8 bits (138), Expect = 2e-08 Identities = 31/66 (46%), Positives = 43/66 (65%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V N L++ FSE+GKVL AKV + +S GFGFV++ S +EV AI L+ L+G++ Sbjct: 195 VTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQK 254 Query: 316 IRVTVA 299 IRV A Sbjct: 255 IRVNKA 260
>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)| Length = 414 Score = 57.0 bits (136), Expect = 3e-08 Identities = 26/70 (37%), Positives = 42/70 (60%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L+ F G V+ A+VIY+R + RSRG+G+V + + AI + G ++DGR Sbjct: 179 IDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRP 238 Query: 316 IRVTVAESKP 287 I ++ SKP Sbjct: 239 INCDMSTSKP 248 Score = 42.0 bits (97), Expect = 0.001 Identities = 16/69 (23%), Positives = 38/69 (55%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D + LF++ G+V+ ++ ++ + +GFG+V + + ++ A+ L G +D R + Sbjct: 279 DRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPV 338 Query: 313 RVTVAESKP 287 R+ + +P Sbjct: 339 RLDFSSPRP 347
>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 616 Score = 56.6 bits (135), Expect = 4e-08 Identities = 24/68 (35%), Positives = 45/68 (66%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+++FSE G V+ +++YDR++G+ +G+GF Y + +A+ NL+G + GR +RV Sbjct: 32 LKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDN 91 Query: 301 AESKPREQ 278 A S+ ++ Sbjct: 92 AASEKNKE 99
>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2| Length = 953 Score = 56.6 bits (135), Expect = 4e-08 Identities = 29/65 (44%), Positives = 43/65 (66%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+NLFS+ GKV+ AKV+ + S +R +GFVT ++DE IS+L +L GR I V Sbjct: 423 LKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMISVEK 482 Query: 301 AESKP 287 A+++P Sbjct: 483 AKNEP 487
>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 632 Score = 56.6 bits (135), Expect = 4e-08 Identities = 24/68 (35%), Positives = 45/68 (66%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+++FSE G V+ +++YDR++G+ +G+GF Y + +A+ NL+G + GR +RV Sbjct: 32 LKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDN 91 Query: 301 AESKPREQ 278 A S+ ++ Sbjct: 92 AASEKNKE 99
>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 572 Score = 56.2 bits (134), Expect = 5e-08 Identities = 24/68 (35%), Positives = 45/68 (66%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+++FSE G V+ +++YDR++G+ +G+GF Y + +A+ NL+G + GR +RV Sbjct: 32 LKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDN 91 Query: 301 AESKPREQ 278 A S+ ++ Sbjct: 92 AASEKNKE 99
>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 56.2 bits (134), Expect = 5e-08 Identities = 24/68 (35%), Positives = 45/68 (66%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+++FSE G V+ +++YDR++G+ +G+GF Y + +A+ NL+G + GR +RV Sbjct: 32 LKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDN 91 Query: 301 AESKPREQ 278 A S+ ++ Sbjct: 92 AASEKNKE 99
>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 580 Score = 56.2 bits (134), Expect = 5e-08 Identities = 24/68 (35%), Positives = 45/68 (66%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+++FSE G V+ +++YDR++G+ +G+GF Y + +A+ NL+G + GR +RV Sbjct: 32 LKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDN 91 Query: 301 AESKPREQ 278 A S+ ++ Sbjct: 92 AASEKNKE 99
>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 56.2 bits (134), Expect = 5e-08 Identities = 24/68 (35%), Positives = 45/68 (66%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+++FSE G V+ +++YDR++G+ +G+GF Y + +A+ NL+G + GR +RV Sbjct: 32 LKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDN 91 Query: 301 AESKPREQ 278 A S+ ++ Sbjct: 92 AASEKNKE 99
>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)| Length = 282 Score = 55.8 bits (133), Expect = 6e-08 Identities = 26/64 (40%), Positives = 40/64 (62%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L +FS G + V+YD+ +GRSRGF FV + D+ A+ +G++LDGR+IRV Sbjct: 135 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDY 194 Query: 301 AESK 290 + +K Sbjct: 195 SITK 198
>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)| Length = 281 Score = 55.8 bits (133), Expect = 6e-08 Identities = 26/64 (40%), Positives = 40/64 (62%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L +FS G + V+YD+ +GRSRGF FV + D+ A+ +G++LDGR+IRV Sbjct: 133 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDY 192 Query: 301 AESK 290 + +K Sbjct: 193 SITK 196
>SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attachment factor| B1) (SAF-B) Length = 931 Score = 55.8 bits (133), Expect = 6e-08 Identities = 29/69 (42%), Positives = 44/69 (63%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+NLFS GKV+ AKV+ + S +R +GFVT +A+E I++L +L G+ I V Sbjct: 444 LKNLFSRYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCINHLHKTELHGKMISVEK 503 Query: 301 AESKPREQR 275 A+S+P +R Sbjct: 504 AKSEPAGKR 512
>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) (Testis-specific poly(A)-binding protein) Length = 631 Score = 55.5 bits (132), Expect = 8e-08 Identities = 27/73 (36%), Positives = 47/73 (64%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L++LF + G L KV+ D +SG+S+GFGFV++ ++ A+ ++G +L+G+Q Sbjct: 202 MDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQ 260 Query: 316 IRVTVAESKPREQ 278 I V A+ K Q Sbjct: 261 IYVGRAQKKVERQ 273 Score = 50.1 bits (118), Expect = 3e-06 Identities = 25/74 (33%), Positives = 42/74 (56%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 G+D+ L FS G + AKV+ + GRS+GFGFV + S +E A++ ++G + + Sbjct: 304 GIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361 Query: 319 QIRVTVAESKPREQ 278 + V +A+ K Q Sbjct: 362 PLYVALAQRKEERQ 375 Score = 41.2 bits (95), Expect = 0.002 Identities = 23/74 (31%), Positives = 42/74 (56%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 ++N L + S G +L V+ D + S+G+GFV + + + AI ++G+ L+GR Sbjct: 110 INNKALYDTVSAFGNILSCNVVCDENG--SKGYGFVHFETHEAAERAIKKMNGMLLNGR- 166 Query: 316 IRVTVAESKPREQR 275 +V V + K R++R Sbjct: 167 -KVFVGQFKSRKER 179
>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 55.5 bits (132), Expect = 8e-08 Identities = 27/73 (36%), Positives = 47/73 (64%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L++LF + G L KV+ D +SG+S+GFGFV++ ++ A+ ++G +L+G+Q Sbjct: 202 MDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQ 260 Query: 316 IRVTVAESKPREQ 278 I V A+ K Q Sbjct: 261 IYVGRAQKKVERQ 273 Score = 49.3 bits (116), Expect = 6e-06 Identities = 25/74 (33%), Positives = 42/74 (56%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 G+D+ L FS G + AKV+ + GRS+GFGFV + S +E A++ ++G + + Sbjct: 304 GIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361 Query: 319 QIRVTVAESKPREQ 278 + V +A+ K Q Sbjct: 362 PLYVALAQRKEERQ 375 Score = 44.7 bits (104), Expect = 1e-04 Identities = 25/74 (33%), Positives = 42/74 (56%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L + FS G +L KV+ D + S+G+GFV + + + AI ++G+ L+ R Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDR- 166 Query: 316 IRVTVAESKPREQR 275 +V V K R++R Sbjct: 167 -KVFVGRFKSRKER 179
>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 55.5 bits (132), Expect = 8e-08 Identities = 27/73 (36%), Positives = 47/73 (64%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L++LF + G L KV+ D +SG+S+GFGFV++ ++ A+ ++G +L+G+Q Sbjct: 202 MDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQ 260 Query: 316 IRVTVAESKPREQ 278 I V A+ K Q Sbjct: 261 IYVGRAQKKVERQ 273 Score = 49.3 bits (116), Expect = 6e-06 Identities = 25/74 (33%), Positives = 42/74 (56%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 G+D+ L FS G + AKV+ + GRS+GFGFV + S +E A++ ++G + + Sbjct: 304 GIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361 Query: 319 QIRVTVAESKPREQ 278 + V +A+ K Q Sbjct: 362 PLYVALAQRKEERQ 375 Score = 44.7 bits (104), Expect = 1e-04 Identities = 25/74 (33%), Positives = 42/74 (56%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L + FS G +L KV+ D + S+G+GFV + + + AI ++G+ L+ R Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDR- 166 Query: 316 IRVTVAESKPREQR 275 +V V K R++R Sbjct: 167 -KVFVGRFKSRKER 179
>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)| Length = 392 Score = 55.1 bits (131), Expect = 1e-07 Identities = 26/70 (37%), Positives = 44/70 (62%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 + +++ F+ GK+ DA+V+ D +G+S+G+GFV++ + + NAI ++ G L GRQ Sbjct: 125 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 184 Query: 316 IRVTVAESKP 287 IR A KP Sbjct: 185 IRTNWATRKP 194
>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)| Length = 375 Score = 55.1 bits (131), Expect = 1e-07 Identities = 26/70 (37%), Positives = 44/70 (62%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 + +++ F+ GK+ DA+V+ D +G+S+G+GFV++ + + NAI ++ G L GRQ Sbjct: 108 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 167 Query: 316 IRVTVAESKP 287 IR A KP Sbjct: 168 IRTNWATRKP 177
>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 55.1 bits (131), Expect = 1e-07 Identities = 27/73 (36%), Positives = 46/73 (63%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L+ LF + G L KV+ D +SG+S+GFGFV++ ++ A+ ++G +L+G+Q Sbjct: 202 MDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQ 260 Query: 316 IRVTVAESKPREQ 278 I V A+ K Q Sbjct: 261 IYVGRAQKKVERQ 273 Score = 49.3 bits (116), Expect = 6e-06 Identities = 25/74 (33%), Positives = 42/74 (56%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 G+D+ L FS G + AKV+ + GRS+GFGFV + S +E A++ ++G + + Sbjct: 304 GIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361 Query: 319 QIRVTVAESKPREQ 278 + V +A+ K Q Sbjct: 362 PLYVALAQRKEERQ 375 Score = 44.7 bits (104), Expect = 1e-04 Identities = 25/74 (33%), Positives = 42/74 (56%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L + FS G +L KV+ D + S+G+GFV + + + AI ++G+ L+ R Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDR- 166 Query: 316 IRVTVAESKPREQR 275 +V V K R++R Sbjct: 167 -KVFVGRFKSRKER 179
>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 55.1 bits (131), Expect = 1e-07 Identities = 27/73 (36%), Positives = 46/73 (63%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L+ LF + G L KV+ D +SG+S+GFGFV++ ++ A+ ++G +L+G+Q Sbjct: 202 MDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQ 260 Query: 316 IRVTVAESKPREQ 278 I V A+ K Q Sbjct: 261 IYVGRAQKKVERQ 273 Score = 49.3 bits (116), Expect = 6e-06 Identities = 25/74 (33%), Positives = 42/74 (56%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 G+D+ L FS G + AKV+ + GRS+GFGFV + S +E A++ ++G + + Sbjct: 304 GIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361 Query: 319 QIRVTVAESKPREQ 278 + V +A+ K Q Sbjct: 362 PLYVALAQRKEERQ 375 Score = 43.1 bits (100), Expect = 4e-04 Identities = 24/74 (32%), Positives = 42/74 (56%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L + FS G +L KV+ D + S+G+GFV + + + AI ++G+ L+ R Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDR- 166 Query: 316 IRVTVAESKPREQR 275 +V V K +++R Sbjct: 167 -KVFVGRFKSQKER 179
>SAFB1_HUMAN (Q15424) Scaffold attachment factor B (Scaffold attachment factor| B1) (SAF-B) (HSP27 estrogen response element-TATA box-binding protein) (HSP27 ERE-TATA-binding protein) Length = 915 Score = 53.9 bits (128), Expect = 2e-07 Identities = 27/65 (41%), Positives = 43/65 (66%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+NLFS+ GKV+ AKV+ + S +R +GFVT +A+E I++L +L G+ I V Sbjct: 422 LKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCINHLHKTELHGKMISVEK 481 Query: 301 AESKP 287 A+++P Sbjct: 482 AKNEP 486
>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein| 1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B) (PABP 1-B) (xPABP1-B) Length = 633 Score = 53.9 bits (128), Expect = 2e-07 Identities = 27/73 (36%), Positives = 44/73 (60%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L+ F + G L KV+ D D G+SRGFGFV++ ++ A+ +++G DL+G+ Sbjct: 202 MDDERLKEWFGQYGAALSVKVMTD-DHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKA 260 Query: 316 IRVTVAESKPREQ 278 I V A+ K Q Sbjct: 261 IFVGRAQKKVERQ 273 Score = 48.5 bits (114), Expect = 1e-05 Identities = 24/74 (32%), Positives = 42/74 (56%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 G+D+ L F+ G + AKV+ + GRS+GFGFV + S +E A++ ++G + + Sbjct: 304 GIDDERLRKEFTPFGSITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361 Query: 319 QIRVTVAESKPREQ 278 + V +A+ K Q Sbjct: 362 PLYVALAQRKEERQ 375 Score = 44.7 bits (104), Expect = 1e-04 Identities = 25/74 (33%), Positives = 42/74 (56%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L + FS G +L KV+ D + S+G+GFV + + + AI ++G+ L+ R Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDR- 166 Query: 316 IRVTVAESKPREQR 275 +V V K R++R Sbjct: 167 -KVFVGRFKSRKER 179
>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)| Length = 386 Score = 53.1 bits (126), Expect = 4e-07 Identities = 25/70 (35%), Positives = 42/70 (60%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 + ++ F+ G++ DA+V+ D +G+S+G+GFV++ + + NAI + G L GRQ Sbjct: 117 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 176 Query: 316 IRVTVAESKP 287 IR A KP Sbjct: 177 IRTNWATRKP 186
>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)| (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15 (p15-TIA-1)] Length = 386 Score = 53.1 bits (126), Expect = 4e-07 Identities = 25/70 (35%), Positives = 42/70 (60%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 + ++ F+ G++ DA+V+ D +G+S+G+GFV++ + + NAI + G L GRQ Sbjct: 117 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 176 Query: 316 IRVTVAESKP 287 IR A KP Sbjct: 177 IRTNWATRKP 186
>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like| generic protein) (MelG) Length = 326 Score = 53.1 bits (126), Expect = 4e-07 Identities = 27/61 (44%), Positives = 40/61 (65%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L +LFS G+V AK+I D+ +G S G+GFV Y +A + AIS L+G+ L + I+V+ Sbjct: 36 LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNGLRLQSKTIKVSY 95 Query: 301 A 299 A Sbjct: 96 A 96 Score = 42.4 bits (98), Expect = 7e-04 Identities = 23/68 (33%), Positives = 39/68 (57%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D L +F G V + KVI D ++ + +GFGFVT + +E AI++L+G L + + Sbjct: 256 DEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASLNGYRLGDKIL 315 Query: 313 RVTVAESK 290 +V+ +K Sbjct: 316 QVSFKTNK 323 Score = 40.8 bits (94), Expect = 0.002 Identities = 18/60 (30%), Positives = 35/60 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 +E++FS G++++++V+ D+ +G SRG F+ + E AI++ G G +TV Sbjct: 122 VEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFIGHKPPGSSEPITV 181
>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA| Length = 101 Score = 52.8 bits (125), Expect = 5e-07 Identities = 30/74 (40%), Positives = 43/74 (58%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V + L +F+E G V ++ DR++GR RGFGFV + E AI LDG + GR Sbjct: 12 VSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEALDGAEWMGRD 71 Query: 316 IRVTVAESKPREQR 275 ++V ++KPRE R Sbjct: 72 LKVN--KAKPRENR 83
>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) (Glycoprotein p43) Length = 391 Score = 52.4 bits (124), Expect = 7e-07 Identities = 24/74 (32%), Positives = 44/74 (59%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 + LE +F + G++++ ++ DR++ +SRGF FVT+ S + +A +++G LDG+ I Sbjct: 20 NEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAI 79 Query: 313 RVTVAESKPREQRR 272 +V A E R Sbjct: 80 KVEQATKPSFESGR 93
>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)| Length = 326 Score = 52.0 bits (123), Expect = 9e-07 Identities = 26/61 (42%), Positives = 40/61 (65%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L +LFS G+V AK+I D+ +G S G+GFV Y +A + AI+ L+G+ L + I+V+ Sbjct: 36 LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSY 95 Query: 301 A 299 A Sbjct: 96 A 96 Score = 43.1 bits (100), Expect = 4e-04 Identities = 23/68 (33%), Positives = 39/68 (57%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D L +F G V + KVI D ++ + +GFGFVT + +E AI++L+G L + + Sbjct: 256 DEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKIL 315 Query: 313 RVTVAESK 290 +V+ +K Sbjct: 316 QVSFKTNK 323 Score = 42.4 bits (98), Expect = 7e-04 Identities = 18/60 (30%), Positives = 36/60 (60%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 +E++FS G++++++V+ D+ +G SRG F+ + E AI++ +G G +TV Sbjct: 122 VEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITV 181
>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) Length = 660 Score = 51.2 bits (121), Expect = 2e-06 Identities = 28/75 (37%), Positives = 45/75 (60%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VD+ L+ +FSE G V +KV+ + G SRGFGFV Y + +E A+S ++G + + Sbjct: 343 VDDEKLKEMFSEYGNVTSSKVMLN-PQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKP 401 Query: 316 IRVTVAESKPREQRR 272 + + +A+ K E RR Sbjct: 402 LYIALAQRK--EDRR 414 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/63 (36%), Positives = 36/63 (57%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L FS G +L KV D +GRS+G+GFV + + AI L+G+ ++ +Q Sbjct: 147 IDNKALFETFSSFGTILSCKVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQ 205 Query: 316 IRV 308 + V Sbjct: 206 VFV 208
>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 50.8 bits (120), Expect = 2e-06 Identities = 27/69 (39%), Positives = 40/69 (57%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L+ LF E G KVI D SG+S+GFGFV Y + + A+ +L G +DG+ Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268 Query: 316 IRVTVAESK 290 + V A+ K Sbjct: 269 LYVGRAQKK 277 Score = 45.4 bits (106), Expect = 8e-05 Identities = 26/63 (41%), Positives = 39/63 (61%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L LFS G +L KV+ D D+G S+G+ +V + S N AI +++GV L+ RQ Sbjct: 117 IDNRALFYLFSAFGNILSCKVVCD-DNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 174 Query: 316 IRV 308 + V Sbjct: 175 VYV 177
>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 50.8 bits (120), Expect = 2e-06 Identities = 27/69 (39%), Positives = 40/69 (57%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L+ LF E G KVI D SG+S+GFGFV Y + + A+ +L G +DG+ Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268 Query: 316 IRVTVAESK 290 + V A+ K Sbjct: 269 LYVGRAQKK 277 Score = 45.4 bits (106), Expect = 8e-05 Identities = 26/63 (41%), Positives = 39/63 (61%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L LFS G +L KV+ D D+G S+G+ +V + S N AI +++GV L+ RQ Sbjct: 117 IDNRALFYLFSAFGNILSCKVVCD-DNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 174 Query: 316 IRV 308 + V Sbjct: 175 VYV 177
>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 50.8 bits (120), Expect = 2e-06 Identities = 27/69 (39%), Positives = 40/69 (57%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L+ LF E G KVI D SG+S+GFGFV Y + + A+ +L G +DG+ Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268 Query: 316 IRVTVAESK 290 + V A+ K Sbjct: 269 LYVGRAQKK 277 Score = 45.4 bits (106), Expect = 8e-05 Identities = 26/63 (41%), Positives = 39/63 (61%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L LFS G +L KV+ D D+G S+G+ +V + S N AI +++GV L+ RQ Sbjct: 117 IDNRALFYLFSAFGNILSCKVVCD-DNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 174 Query: 316 IRV 308 + V Sbjct: 175 VYV 177
>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 50.8 bits (120), Expect = 2e-06 Identities = 27/69 (39%), Positives = 40/69 (57%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L+ LF E G KVI D SG+S+GFGFV Y + + A+ +L G +DG+ Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268 Query: 316 IRVTVAESK 290 + V A+ K Sbjct: 269 LYVGRAQKK 277 Score = 45.4 bits (106), Expect = 8e-05 Identities = 26/63 (41%), Positives = 39/63 (61%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L LFS G +L KV+ D D+G S+G+ +V + S N AI +++GV L+ RQ Sbjct: 117 IDNRALFYLFSAFGNILSCKVVCD-DNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 174 Query: 316 IRV 308 + V Sbjct: 175 VYV 177
>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 50.8 bits (120), Expect = 2e-06 Identities = 27/69 (39%), Positives = 40/69 (57%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L+ LF E G KVI D SG+S+GFGFV Y + + A+ +L G +DG+ Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268 Query: 316 IRVTVAESK 290 + V A+ K Sbjct: 269 LYVGRAQKK 277 Score = 45.4 bits (106), Expect = 8e-05 Identities = 26/63 (41%), Positives = 39/63 (61%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L LFS G +L KV+ D D+G S+G+ +V + S N AI +++GV L+ RQ Sbjct: 117 IDNRALFYLFSAFGNILSCKVVCD-DNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 174 Query: 316 IRV 308 + V Sbjct: 175 VYV 177
>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 50.8 bits (120), Expect = 2e-06 Identities = 27/69 (39%), Positives = 40/69 (57%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L+ LF E G KVI D SG+S+GFGFV Y + + A+ +L G +DG+ Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268 Query: 316 IRVTVAESK 290 + V A+ K Sbjct: 269 LYVGRAQKK 277 Score = 45.4 bits (106), Expect = 8e-05 Identities = 26/63 (41%), Positives = 39/63 (61%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L LFS G +L KV+ D D+G S+G+ +V + S N AI +++GV L+ RQ Sbjct: 117 IDNRALFYLFSAFGNILSCKVVCD-DNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 174 Query: 316 IRV 308 + V Sbjct: 175 VYV 177
>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein| 1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A) (PABP 1-A) (xPABP1-A) Length = 633 Score = 50.8 bits (120), Expect = 2e-06 Identities = 23/73 (31%), Positives = 45/73 (61%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +++ L+ +F + G L KV+ D D+G+S+GFGFV++ ++ A+ ++G D++G+ Sbjct: 202 MNDERLKEMFGKYGPALSVKVMTD-DNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKS 260 Query: 316 IRVTVAESKPREQ 278 + V A+ K Q Sbjct: 261 MFVGRAQKKVERQ 273 Score = 47.0 bits (110), Expect = 3e-05 Identities = 24/74 (32%), Positives = 41/74 (55%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 G+D+ L F G + AKV+ + GRS+GFGFV + S +E A++ ++G + + Sbjct: 304 GIDDERLRKEFLPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361 Query: 319 QIRVTVAESKPREQ 278 + V +A+ K Q Sbjct: 362 PLYVALAQRKEERQ 375 Score = 44.7 bits (104), Expect = 1e-04 Identities = 25/74 (33%), Positives = 42/74 (56%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L + FS G +L KV+ D + S+G+GFV + + + AI ++G+ L+ R Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDR- 166 Query: 316 IRVTVAESKPREQR 275 +V V K R++R Sbjct: 167 -KVFVGRFKSRKER 179
>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 50.4 bits (119), Expect = 3e-06 Identities = 23/74 (31%), Positives = 43/74 (58%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 + LE +F + G++++ ++ DR++ +SRGF FVT+ S + + +++G LDG+ I Sbjct: 20 NEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDMNGKSLDGKAI 79 Query: 313 RVTVAESKPREQRR 272 +V A E R Sbjct: 80 KVEQATKPSFESGR 93
>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 668 Score = 50.1 bits (118), Expect = 3e-06 Identities = 27/84 (32%), Positives = 45/84 (53%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V++ L+ +FSE G V KV+ + G SRGFGFV Y + +E A+ ++G + + Sbjct: 339 VNDEKLKEMFSEYGNVTSCKVMMN-SQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKP 397 Query: 316 IRVTVAESKPREQRRF*DILTLVR 245 + V +A+ K Q + T +R Sbjct: 398 LYVALAQRKEERQAHLQSLFTQIR 421 Score = 43.9 bits (102), Expect = 2e-04 Identities = 24/63 (38%), Positives = 35/63 (55%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L FS G +L KV D GRS+G+GFV + + AI L+G+ L+ +Q Sbjct: 143 IDNKALYETFSSFGTILSCKVAMDV-VGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQ 201 Query: 316 IRV 308 + V Sbjct: 202 VFV 204
>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 634 Score = 49.7 bits (117), Expect = 4e-06 Identities = 27/75 (36%), Positives = 45/75 (60%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L FS G + AKV+ D + GRS+GFGFV + +A E A++ L+G + + Sbjct: 298 IDDDRLRIAFSPYGNITSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTELNGRVVGSKP 356 Query: 316 IRVTVAESKPREQRR 272 + V +A+ K E+R+ Sbjct: 357 LYVALAQRK--EERK 369 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/74 (33%), Positives = 45/74 (60%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN + + FS G +L KV D + G S+G+GFV + + + N +I ++G+ L+G+ Sbjct: 101 IDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGK- 158 Query: 316 IRVTVAESKPREQR 275 +V V + PR++R Sbjct: 159 -KVYVGKFIPRKER 171 Score = 46.2 bits (108), Expect = 5e-05 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDL-DGRQ 317 D+ L+ F GK+ KV+ ++ G+S+GFGFV + + + A+ L+G D+ +G+ Sbjct: 195 DDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKS 253 Query: 316 IRVTVAESKPREQR 275 + V A+ K Q+ Sbjct: 254 LYVARAQKKAERQQ 267
>GAR2_SCHPO (P41891) Protein gar2| Length = 500 Score = 49.7 bits (117), Expect = 4e-06 Identities = 22/70 (31%), Positives = 41/70 (58%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VD+ L F E G ++ A+VI D SGRS+G+G+V + + + A++ ++DGR Sbjct: 274 VDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAANGTKEIDGRM 333 Query: 316 IRVTVAESKP 287 + + ++ +P Sbjct: 334 VNLDLSNPRP 343 Score = 32.7 bits (73), Expect = 0.56 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 L F G + ++ D SGR +GFG+VT+ D + ++G + GR R+ Sbjct: 382 LSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCV-EMNGHFIAGRPCRL 438
>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 49.7 bits (117), Expect = 4e-06 Identities = 24/69 (34%), Positives = 44/69 (63%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 + LE +F + G++++ ++ DR++ +SRGF FVT S + +A +++G LDG+ I Sbjct: 20 NEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARDMNGKSLDGKAI 79 Query: 313 RVTVAESKP 287 +V A +KP Sbjct: 80 KVEQA-TKP 87
>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein| 23) (RNA-binding region-containing protein 4) (Splicing factor SF2) Length = 439 Score = 49.7 bits (117), Expect = 4e-06 Identities = 21/63 (33%), Positives = 38/63 (60%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 + L +F GK+ + ++ D D+GRS+G+GF+T+ ++ A+ L+G +L GR Sbjct: 274 ITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRP 333 Query: 316 IRV 308 +RV Sbjct: 334 MRV 336 Score = 39.3 bits (90), Expect = 0.006 Identities = 25/64 (39%), Positives = 36/64 (56%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 LE+ FS GKV D ++I DR+S RS+G +V + V AI L G L G I V Sbjct: 182 LEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQA 240 Query: 301 AESK 290 ++++ Sbjct: 241 SQAE 244
>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 49.3 bits (116), Expect = 6e-06 Identities = 24/62 (38%), Positives = 37/62 (59%) Frame = -2 Query: 484 TLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVT 305 TL +F + G+V D + DR + SRGF FV + + +A+ +DG LDGR++RV Sbjct: 28 TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 87 Query: 304 VA 299 +A Sbjct: 88 MA 89
>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 49.3 bits (116), Expect = 6e-06 Identities = 24/62 (38%), Positives = 37/62 (59%) Frame = -2 Query: 484 TLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVT 305 TL +F + G+V D + DR + SRGF FV + + +A+ +DG LDGR++RV Sbjct: 28 TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 87 Query: 304 VA 299 +A Sbjct: 88 MA 89
>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) (Putative myelin regulatory factor 1) (MRF-1) Length = 220 Score = 49.3 bits (116), Expect = 6e-06 Identities = 24/62 (38%), Positives = 37/62 (59%) Frame = -2 Query: 484 TLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVT 305 TL +F + G+V D + DR + SRGF FV + + +A+ +DG LDGR++RV Sbjct: 28 TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 87 Query: 304 VA 299 +A Sbjct: 88 MA 89
>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 220 Score = 49.3 bits (116), Expect = 6e-06 Identities = 24/62 (38%), Positives = 37/62 (59%) Frame = -2 Query: 484 TLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVT 305 TL +F + G+V D + DR + SRGF FV + + +A+ +DG LDGR++RV Sbjct: 28 TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 87 Query: 304 VA 299 +A Sbjct: 88 MA 89
>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PABP 2) Length = 629 Score = 49.3 bits (116), Expect = 6e-06 Identities = 25/68 (36%), Positives = 41/68 (60%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+N F E GK+ A V+ D + G+S+GFGFV + +AD+ A+ +L+G D ++ V Sbjct: 231 LKNAFGEYGKITSAVVMKDGE-GKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGR 289 Query: 301 AESKPREQ 278 A+ K + Sbjct: 290 AQKKSERE 297 Score = 48.5 bits (114), Expect = 1e-05 Identities = 23/63 (36%), Positives = 38/63 (60%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D+ L + FS G ++ KV D SG+S+G+GFV Y + + AI L+G+ L+ +Q Sbjct: 135 IDHKALHDTFSSFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQ 193 Query: 316 IRV 308 + V Sbjct: 194 VYV 196 Score = 45.4 bits (106), Expect = 8e-05 Identities = 25/75 (33%), Positives = 43/75 (57%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 + + L+ +FS G V +KV+ D +G S+G GFV + + +E A+S L G ++ + Sbjct: 329 ISDEKLKEIFSPFGTVTSSKVMRD-PNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKP 387 Query: 316 IRVTVAESKPREQRR 272 + V +A+ K E RR Sbjct: 388 LYVAIAQRK--EDRR 400 Score = 42.4 bits (98), Expect = 7e-04 Identities = 23/74 (31%), Positives = 39/74 (52%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V +S L + F + G V+ +V D + RS G+G+V + + + AI L+ + L G+ Sbjct: 47 VTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKP 106 Query: 316 IRVTVAESKPREQR 275 IRV + P +R Sbjct: 107 IRVMYSHRDPSVRR 120
>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 653 Score = 49.3 bits (116), Expect = 6e-06 Identities = 25/69 (36%), Positives = 43/69 (62%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VD+ L+ FS G + AK++ D + G+S+GFGFV Y + +E N A++ ++ L G+ Sbjct: 375 VDDERLKAEFSAFGTITSAKIMTD-EQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKP 433 Query: 316 IRVTVAESK 290 + V +A+ K Sbjct: 434 LYVALAQRK 442 Score = 48.9 bits (115), Expect = 8e-06 Identities = 25/75 (33%), Positives = 44/75 (58%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L + FS GK+L KV D + G ++G+GFV + S + N AI +++G+ L+ ++ Sbjct: 179 IDNKALHDTFSAFGKILSCKVAVD-ELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKK 237 Query: 316 IRVTVAESKPREQRR 272 + V S+ Q + Sbjct: 238 VYVGHHVSRRERQSK 252 Score = 36.6 bits (83), Expect = 0.039 Identities = 17/69 (24%), Positives = 36/69 (52%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 + +LF + G++ ++ D++ + RGFGFV Y + + A+ L+ + G++ Sbjct: 272 ITEQEFSDLFGQFGEITSLSLVKDQND-KPRGFGFVNYANHECAQKAVDELNDKEYKGKK 330 Query: 316 IRVTVAESK 290 + V A+ K Sbjct: 331 LYVGRAQKK 339
>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 221 Score = 49.3 bits (116), Expect = 6e-06 Identities = 24/62 (38%), Positives = 37/62 (59%) Frame = -2 Query: 484 TLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVT 305 TL +F + G+V D + DR + SRGF FV + + +A+ +DG LDGR++RV Sbjct: 29 TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 88 Query: 304 VA 299 +A Sbjct: 89 MA 90
>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)| Length = 367 Score = 48.9 bits (115), Expect = 8e-06 Identities = 28/68 (41%), Positives = 39/68 (57%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D S L LF G V + KVI D + + +GFGFVT + DE AI++L+G L R + Sbjct: 296 DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVL 355 Query: 313 RVTVAESK 290 +V+ SK Sbjct: 356 QVSFKTSK 363 Score = 43.9 bits (102), Expect = 2e-04 Identities = 23/76 (30%), Positives = 41/76 (53%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 +E LFS+ G+++ ++++ D+ +G SRG GF+ + E AI L+G G +TV Sbjct: 141 MEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITV 200 Query: 301 AESKPREQRRF*DILT 254 + Q+ +LT Sbjct: 201 KFANNPSQKTGQALLT 216
>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic| cerebellar degeneration-associated antigen) (Paraneoplastic limbic encephalitis antigen 21) Length = 367 Score = 48.9 bits (115), Expect = 8e-06 Identities = 28/68 (41%), Positives = 39/68 (57%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D S L LF G V + KVI D + + +GFGFVT + DE AI++L+G L R + Sbjct: 296 DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVL 355 Query: 313 RVTVAESK 290 +V+ SK Sbjct: 356 QVSFKTSK 363 Score = 43.5 bits (101), Expect = 3e-04 Identities = 23/76 (30%), Positives = 41/76 (53%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 +E LFS+ G+++ ++++ D+ +G SRG GF+ + E AI L+G G +TV Sbjct: 141 MEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITV 200 Query: 301 AESKPREQRRF*DILT 254 + Q+ +LT Sbjct: 201 KFANNPSQKTGQALLT 216
>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4| (RNA-binding protein srp-2) (CeSC35) Length = 196 Score = 48.5 bits (114), Expect = 1e-05 Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L F G + D + D+ S +S+GFGFV + + +A+ DG +DGR++RVT+ Sbjct: 35 LRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTL 94 Query: 301 AE-SKPREQR 275 A+ +P ++R Sbjct: 95 AKYDRPSDER 104
>NUCL_XENLA (P20397) Nucleolin (Protein C23)| Length = 650 Score = 48.5 bits (114), Expect = 1e-05 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%) Frame = -2 Query: 499 GVDNSTLENLFSE--QGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLD 326 G+ T E E G V +A+++ DRD+G S+GFGFV + +A++ A ++ ++D Sbjct: 508 GLSEDTTEETLKEAFDGSV-NARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEID 566 Query: 325 GRQIRVTVAESKPREQR 275 G ++ + A+ K QR Sbjct: 567 GNKVTLDFAKPKGDSQR 583 Score = 37.7 bits (86), Expect = 0.017 Identities = 12/43 (27%), Positives = 30/43 (69%) Frame = -2 Query: 424 RDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAE 296 ++ GR++GF F+ + SA++ +A+ + + +++GR IR+ ++ Sbjct: 444 QNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFSQ 486
>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 373 Score = 48.1 bits (113), Expect = 1e-05 Identities = 27/68 (39%), Positives = 40/68 (58%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D S L LF G V + KVI D ++ + +GFGFVT + DE AI++L+G L R + Sbjct: 302 DESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 361 Query: 313 RVTVAESK 290 +V+ +K Sbjct: 362 QVSFKTNK 369 Score = 45.4 bits (106), Expect = 8e-05 Identities = 21/60 (35%), Positives = 35/60 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 LE LFS+ G+++ ++++ D+ +G SRG GF+ + E AI L+G G +TV Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITV 200
>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 380 Score = 48.1 bits (113), Expect = 1e-05 Identities = 27/68 (39%), Positives = 40/68 (58%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D S L LF G V + KVI D ++ + +GFGFVT + DE AI++L+G L R + Sbjct: 309 DESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 368 Query: 313 RVTVAESK 290 +V+ +K Sbjct: 369 QVSFKTNK 376 Score = 45.4 bits (106), Expect = 8e-05 Identities = 21/60 (35%), Positives = 35/60 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 LE LFS+ G+++ ++++ D+ +G SRG GF+ + E AI L+G G +TV Sbjct: 148 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITV 207
>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 385 Score = 48.1 bits (113), Expect = 1e-05 Identities = 27/68 (39%), Positives = 40/68 (58%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D S L LF G V + KVI D ++ + +GFGFVT + DE AI++L+G L R + Sbjct: 314 DESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 373 Query: 313 RVTVAESK 290 +V+ +K Sbjct: 374 QVSFKTNK 381 Score = 45.4 bits (106), Expect = 8e-05 Identities = 21/60 (35%), Positives = 35/60 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 LE LFS+ G+++ ++++ D+ +G SRG GF+ + E AI L+G G +TV Sbjct: 153 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITV 212
>NAM8_YEAST (Q00539) Protein NAM8| Length = 523 Score = 47.8 bits (112), Expect = 2e-05 Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Frame = -2 Query: 496 VDNSTLENLF-SEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 V S L LF + AK+++D+ +G S+G+GFV + ++DE A+S + GV L+GR Sbjct: 174 VTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGR 233 Query: 319 QIRV 308 I+V Sbjct: 234 AIKV 237
>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)| (hnRNP 48) (HRP48.1) Length = 421 Score = 47.8 bits (112), Expect = 2e-05 Identities = 21/69 (30%), Positives = 42/69 (60%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V + L F+ GKV + ++YD++ +SRGFGF+++ V + ++N ++L+G+Q Sbjct: 107 VTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEH-VTNERYINLNGKQ 165 Query: 316 IRVTVAESK 290 + + AE + Sbjct: 166 VEIKKAEPR 174 Score = 46.6 bits (109), Expect = 4e-05 Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 7/61 (11%) Frame = -2 Query: 487 STLENL---FSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISN----LDGVDL 329 +T ENL F G ++D V+ + +SGRSRGFGFVT+ VN+ + N LDG + Sbjct: 18 TTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTI 77 Query: 328 D 326 D Sbjct: 78 D 78
>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)| Length = 359 Score = 47.8 bits (112), Expect = 2e-05 Identities = 26/68 (38%), Positives = 40/68 (58%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D S L +F G V + KVI D ++ + +GFGFVT + DE AI++L+G L R + Sbjct: 288 DESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 347 Query: 313 RVTVAESK 290 +V+ +K Sbjct: 348 QVSFKTNK 355 Score = 45.1 bits (105), Expect = 1e-04 Identities = 21/60 (35%), Positives = 35/60 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 LE LFS+ G+++ ++++ D+ +G SRG GF+ + E AI L+G G +TV Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITV 200
>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2| Length = 359 Score = 47.8 bits (112), Expect = 2e-05 Identities = 26/68 (38%), Positives = 40/68 (58%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D S L +F G V + KVI D ++ + +GFGFVT + DE AI++L+G L R + Sbjct: 288 DESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 347 Query: 313 RVTVAESK 290 +V+ +K Sbjct: 348 QVSFKTNK 355 Score = 45.1 bits (105), Expect = 1e-04 Identities = 21/60 (35%), Positives = 35/60 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 LE LFS+ G+++ ++++ D+ +G SRG GF+ + E AI L+G G +TV Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITV 200
>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Hel-N1) Length = 359 Score = 47.8 bits (112), Expect = 2e-05 Identities = 26/68 (38%), Positives = 40/68 (58%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D S L +F G V + KVI D ++ + +GFGFVT + DE AI++L+G L R + Sbjct: 288 DESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 347 Query: 313 RVTVAESK 290 +V+ +K Sbjct: 348 QVSFKTNK 355 Score = 45.1 bits (105), Expect = 1e-04 Identities = 21/60 (35%), Positives = 35/60 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 LE LFS+ G+++ ++++ D+ +G SRG GF+ + E AI L+G G +TV Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITV 200
>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Mel-N1) Length = 360 Score = 47.8 bits (112), Expect = 2e-05 Identities = 26/68 (38%), Positives = 40/68 (58%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D S L +F G V + KVI D ++ + +GFGFVT + DE AI++L+G L R + Sbjct: 289 DESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 348 Query: 313 RVTVAESK 290 +V+ +K Sbjct: 349 QVSFKTNK 356 Score = 45.1 bits (105), Expect = 1e-04 Identities = 21/60 (35%), Positives = 35/60 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 LE LFS+ G+++ ++++ D+ +G SRG GF+ + E AI L+G G +TV Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITV 200
>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of| activating protein 1 and estrogen receptors) (Coactivator of AP-1 and ERs) (Transcription coactivator CAPER) Length = 530 Score = 47.4 bits (111), Expect = 2e-05 Identities = 18/63 (28%), Positives = 38/63 (60%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 + L +F G++ +++ D ++GRS+G+GF+T+ ++ A+ L+G +L GR Sbjct: 261 ITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRP 320 Query: 316 IRV 308 ++V Sbjct: 321 MKV 323 Score = 39.3 bits (90), Expect = 0.006 Identities = 25/64 (39%), Positives = 35/64 (54%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 LE FS GKV D ++I DR+S RSRG +V + V AI L G + G I V Sbjct: 169 LEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLAI-GLTGQRVLGVPIIVQA 227 Query: 301 AESK 290 ++++ Sbjct: 228 SQAE 231
>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular| carcinoma protein 1) (Splicing factor HCC1) Length = 530 Score = 47.4 bits (111), Expect = 2e-05 Identities = 18/63 (28%), Positives = 38/63 (60%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 + L +F G++ +++ D ++GRS+G+GF+T+ ++ A+ L+G +L GR Sbjct: 261 ITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRP 320 Query: 316 IRV 308 ++V Sbjct: 321 MKV 323 Score = 37.4 bits (85), Expect = 0.023 Identities = 24/64 (37%), Positives = 35/64 (54%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 LE FS GKV D ++I DR+S RS+G +V + V AI L G + G I V Sbjct: 169 LEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQA 227 Query: 301 AESK 290 ++++ Sbjct: 228 SQAE 231
>RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 758 Score = 47.0 bits (110), Expect = 3e-05 Identities = 25/70 (35%), Positives = 40/70 (57%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 LE LFS+ G V V+ ++ S RGFG+VT+ ++V A+ + +G +I VTV Sbjct: 19 LEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI--TTFEGCKINVTV 76 Query: 301 AESKPREQRR 272 A+ K R + + Sbjct: 77 AKKKLRNKTK 86 Score = 37.4 bits (85), Expect = 0.023 Identities = 20/66 (30%), Positives = 37/66 (56%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+ +F++ G VL+ + D G+ RGFGFV + + E A+ ++ ++ GR + V Sbjct: 129 LKTVFAQFGAVLEVNIPRKPD-GKMRGFGFVQFKNLLEAGKALKGMNMKEIKGRTVAVDW 187 Query: 301 AESKPR 284 A +K + Sbjct: 188 AVAKDK 193 Score = 28.9 bits (63), Expect = 8.1 Identities = 15/74 (20%), Positives = 35/74 (47%), Gaps = 6/74 (8%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI------SNLDGVD 332 + L L + G++ +++ D+ S+G F + + + + + G+ Sbjct: 346 EEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLAASPENEAGGLK 405 Query: 331 LDGRQIRVTVAESK 290 LDGRQ++V +A ++ Sbjct: 406 LDGRQLKVDLAVTR 419
>NUCL_CHICK (P15771) Nucleolin (Protein C23)| Length = 694 Score = 47.0 bits (110), Expect = 3e-05 Identities = 22/73 (30%), Positives = 42/73 (57%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 +++T E L + A+++ DRD+G S+GFGFV + S ++ A ++ ++DG ++ Sbjct: 562 EDTTEETLRESFEGSISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMEDGEIDGNKV 621 Query: 313 RVTVAESKPREQR 275 + A+ K QR Sbjct: 622 TLDFAKPKGEFQR 634 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/73 (19%), Positives = 37/73 (50%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V ++N+F L+ +++ +++ G S+G ++ + + E A+ G ++DGR Sbjct: 382 VTEDEMKNVFEN---ALEVRLVLNKE-GSSKGMAYIEFKTEAEAEKALEEKQGTEVDGRA 437 Query: 316 IRVTVAESKPREQ 278 + + K +++ Sbjct: 438 MVIDYTGEKSQQE 450
>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear| (Poly(A)-binding protein) (PABP) (ARS consensus-binding protein ACBP-67) (Polyadenylate tail-binding protein) Length = 576 Score = 46.6 bits (109), Expect = 4e-05 Identities = 24/63 (38%), Positives = 39/63 (61%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +DN L + FS G +L +K+ D ++G+S+GFGFV + AI L+G+ L+G++ Sbjct: 136 IDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQE 194 Query: 316 IRV 308 I V Sbjct: 195 IYV 197 Score = 45.1 bits (105), Expect = 1e-04 Identities = 23/69 (33%), Positives = 41/69 (59%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VD+ LE F+ G + AKV+ ++G+S+GFGFV + + +E AI+ + + G+ Sbjct: 332 VDDEKLEEEFAPYGTITSAKVMRT-ENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKP 390 Query: 316 IRVTVAESK 290 + V +A+ K Sbjct: 391 LYVAIAQRK 399 Score = 39.3 bits (90), Expect = 0.006 Identities = 20/63 (31%), Positives = 37/63 (58%) Frame = -2 Query: 478 ENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVA 299 + LF++ G ++ A + D D G+ +GFGFV Y ++ A+ L+ +L+G ++ V A Sbjct: 235 QELFAKFGPIVSASLEKDAD-GKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRA 293 Query: 298 ESK 290 + K Sbjct: 294 QKK 296
>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) Length = 319 Score = 46.6 bits (109), Expect = 4e-05 Identities = 27/72 (37%), Positives = 42/72 (58%) Frame = -2 Query: 490 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIR 311 + +L + F + G + D V+ D ++ RSRGFGFVTY + +EV+ A+ N +DGR + Sbjct: 26 DESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM-NARPHKVDGRVVE 84 Query: 310 VTVAESKPREQR 275 A S+ QR Sbjct: 85 PKRAVSREDSQR 96 Score = 38.5 bits (88), Expect = 0.010 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 L + F + GK+ +++ DR SG+ RGF FVT+ D V+ + Sbjct: 120 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162
>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP-1) (Topoisomerase-inhibitor suppressed) Length = 319 Score = 46.6 bits (109), Expect = 4e-05 Identities = 27/72 (37%), Positives = 42/72 (58%) Frame = -2 Query: 490 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIR 311 + +L + F + G + D V+ D ++ RSRGFGFVTY + +EV+ A+ N +DGR + Sbjct: 26 DESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM-NARPHKVDGRVVE 84 Query: 310 VTVAESKPREQR 275 A S+ QR Sbjct: 85 PKRAVSREDSQR 96 Score = 38.5 bits (88), Expect = 0.010 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 L + F + GK+ +++ DR SG+ RGF FVT+ D V+ + Sbjct: 120 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162
>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) Length = 371 Score = 46.6 bits (109), Expect = 4e-05 Identities = 27/72 (37%), Positives = 42/72 (58%) Frame = -2 Query: 490 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIR 311 + +L + F + G + D V+ D ++ RSRGFGFVTY + +EV+ A+ N +DGR + Sbjct: 26 DESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM-NARPHKVDGRVVE 84 Query: 310 VTVAESKPREQR 275 A S+ QR Sbjct: 85 PKRAVSREDSQR 96 Score = 38.5 bits (88), Expect = 0.010 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 L + F + GK+ +++ DR SG+ RGF FVT+ D V+ + Sbjct: 120 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162
>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (Unwinding protein 1) (UP1) (Fragment) Length = 195 Score = 46.6 bits (109), Expect = 4e-05 Identities = 27/72 (37%), Positives = 42/72 (58%) Frame = -2 Query: 490 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIR 311 + +L + F + G + D V+ D ++ RSRGFGFVTY + +EV+ A+ N +DGR + Sbjct: 26 DESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM-NARPHKVDGRVVE 84 Query: 310 VTVAESKPREQR 275 A S+ QR Sbjct: 85 PKRAVSREDSQR 96 Score = 38.5 bits (88), Expect = 0.010 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 L + F + GK+ +++ DR SG+ RGF FVT+ D V+ + Sbjct: 120 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162
>RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 749 Score = 46.2 bits (108), Expect = 5e-05 Identities = 25/70 (35%), Positives = 40/70 (57%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 LE LFS+ G V V+ ++ S RGFG+VT+ ++V A+ + +G +I VTV Sbjct: 19 LEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI--TTFEGCKIDVTV 76 Query: 301 AESKPREQRR 272 A+ K R + + Sbjct: 77 AKKKLRNKSK 86
>THOC4_HUMAN (Q86V81) THO complex subunit 4 (Tho4) (Ally of AML-1 and LEF-1)| (Transcriptional coactivator Aly/REF) (bZIP-enhancing factor BEF) Length = 256 Score = 46.2 bits (108), Expect = 5e-05 Identities = 28/76 (36%), Positives = 42/76 (55%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 GV ++ ++ LF+E G + A V YDR SGRS G V + + A+ +GV LDGR Sbjct: 115 GVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGR 173 Query: 319 QIRVTVAESKPREQRR 272 + + + S+ QRR Sbjct: 174 PMNIQLVTSQIDAQRR 189
>PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 300 Score = 46.2 bits (108), Expect = 5e-05 Identities = 24/67 (35%), Positives = 37/67 (55%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V L N F G + D ++ D +S R RGF F+ Y +++ AI N++ +L GR Sbjct: 17 VTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAIDNMNDSELCGRT 76 Query: 316 IRVTVAE 296 IRV +A+ Sbjct: 77 IRVNLAK 83
>A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1| Length = 396 Score = 46.2 bits (108), Expect = 5e-05 Identities = 22/64 (34%), Positives = 40/64 (62%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L +F + GK+LD ++I++ S+GFGFVT+ ++ + + A L G ++GR+I V Sbjct: 132 LRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 189 Query: 301 AESK 290 A ++ Sbjct: 190 ATAR 193
>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic| region Length = 781 Score = 46.2 bits (108), Expect = 5e-05 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L LFS+ G +L K+IYD+ G G+GF++Y + + I L+G ++G + + Sbjct: 211 LSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIKELNGRTVNGSTLFINY 270 Query: 301 -AESKPREQ 278 E K RE+ Sbjct: 271 HVERKERER 279 Score = 31.2 bits (69), Expect = 1.6 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = -2 Query: 478 ENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 +N + +Q D+ D G SRG+GFV++ S + AI N DG + Q+ Sbjct: 578 KNKYRQQSN--DSSSDNDLPVGSSRGYGFVSFESPLDAAKAILNTDGYQVSKDQV 630
>A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1| Length = 397 Score = 46.2 bits (108), Expect = 5e-05 Identities = 22/64 (34%), Positives = 40/64 (62%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L +F + GK+LD ++I++ S+GFGFVT+ ++ + + A L G ++GR+I V Sbjct: 133 LRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 190 Query: 301 AESK 290 A ++ Sbjct: 191 ATAR 194
>RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif protein 9)| (Hexaribonucleotide-binding protein 2) (Repressor of tamoxifen transcriptional activity) Length = 390 Score = 46.2 bits (108), Expect = 5e-05 Identities = 22/64 (34%), Positives = 40/64 (62%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L +F + GK+LD ++I++ S+GFGFVT+ ++ + + A L G ++GR+I V Sbjct: 137 LRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 194 Query: 301 AESK 290 A ++ Sbjct: 195 ATAR 198
>THOC4_MOUSE (O08583) THO complex subunit 4 (Tho4) (RNA and export| factor-binding protein 1) (REF1-I) (Ally of AML-1 and LEF-1) (Aly/REF) Length = 254 Score = 46.2 bits (108), Expect = 5e-05 Identities = 28/76 (36%), Positives = 42/76 (55%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 GV ++ ++ LF+E G + A V YDR SGRS G V + + A+ +GV LDGR Sbjct: 114 GVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGR 172 Query: 319 QIRVTVAESKPREQRR 272 + + + S+ QRR Sbjct: 173 PMNIQLVTSQIDTQRR 188
>SCE3_SCHPO (O14369) Probable RNA-binding protein sce3| Length = 388 Score = 45.8 bits (107), Expect = 6e-05 Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 3/62 (4%) Frame = -2 Query: 451 VLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAE---SKPRE 281 V +++ D + RSRGFG+V + +AD ++ A++ L G DL GR +R+TVAE S RE Sbjct: 118 VTSIRLVIDPLTERSRGFGYVEFETADTLSAALA-LSGEDLMGRPVRITVAEPRRSFARE 176 Query: 280 QR 275 +R Sbjct: 177 ER 178
>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 319 Score = 45.1 bits (105), Expect = 1e-04 Identities = 26/72 (36%), Positives = 42/72 (58%) Frame = -2 Query: 490 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIR 311 + +L + F + G + D V+ D ++ RSRGFGFVTY + ++V+ A+ N +DGR + Sbjct: 26 DESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAM-NARPHKVDGRVVE 84 Query: 310 VTVAESKPREQR 275 A S+ QR Sbjct: 85 PKRAVSREDSQR 96 Score = 36.6 bits (83), Expect = 0.039 Identities = 15/43 (34%), Positives = 26/43 (60%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 L + F + GK+ +++ DR SG+ RGF FVT+ + V+ + Sbjct: 120 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIV 162
>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP| A1) (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 365 Score = 45.1 bits (105), Expect = 1e-04 Identities = 28/72 (38%), Positives = 40/72 (55%) Frame = -2 Query: 490 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIR 311 + +L F + G + D V+ D +S RSRGFGFVTY S DEV+ A++ +DGR + Sbjct: 27 DESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTARPH-KVDGRVVE 85 Query: 310 VTVAESKPREQR 275 A S+ R Sbjct: 86 PKRAVSREDSSR 97 Score = 38.1 bits (87), Expect = 0.013 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNN-AISNLDGVDLDGRQIRVT 305 L F + GK+ +++ DR SG+ RGF FVT+ D V+ I V+ Q+R Sbjct: 121 LREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNSQVRKA 180 Query: 304 VAESK 290 +++ + Sbjct: 181 LSKQE 185
>RB97D_DROME (Q02926) Ribonucleoprotein RB97D| Length = 471 Score = 45.1 bits (105), Expect = 1e-04 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 3/75 (4%) Frame = -2 Query: 487 STLENL---FSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +T ENL + + GKV+D V+ D + RSRGFGF+TY + V+ A N + +DG+ Sbjct: 43 TTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENRPHI-IDGKT 101 Query: 316 IRVTVAESKPREQRR 272 + A +P + R Sbjct: 102 VEAKRALPRPERESR 116
>GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein GBP2| (G-strand-binding protein 2) (RAP1 localization factor 6) Length = 427 Score = 44.7 bits (104), Expect = 1e-04 Identities = 25/59 (42%), Positives = 38/59 (64%) Frame = -2 Query: 484 TLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 +L+++F E G VL A V D + G SRGFG V Y + DE+ AI +G++++GR + V Sbjct: 234 SLKDMFKECGHVLRADVELDFN-GFSRGFGSVIYPTEDEMIRAIDTFNGMEVEGRVLEV 291 Score = 37.4 bits (85), Expect = 0.023 Identities = 22/71 (30%), Positives = 34/71 (47%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+ LF G+V++A +I + G RG G V + + V +AIS DG R++ V Sbjct: 138 LKELFGTVGEVVEADIITSK--GHHRGMGTVEFTKNESVQDAISKFDGALFMDRKLMVRQ 195 Query: 301 AESKPREQRRF 269 P + F Sbjct: 196 DNPPPEAAKEF 206
>PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 44.7 bits (104), Expect = 1e-04 Identities = 23/67 (34%), Positives = 38/67 (56%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VD+ L F G + D ++ D ++ + RGF FV + A++ AI N++ +L GR Sbjct: 17 VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRT 76 Query: 316 IRVTVAE 296 IRV +A+ Sbjct: 77 IRVNLAK 83
>PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 44.7 bits (104), Expect = 1e-04 Identities = 23/67 (34%), Positives = 38/67 (56%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VD+ L F G + D ++ D ++ + RGF FV + A++ AI N++ +L GR Sbjct: 17 VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRT 76 Query: 316 IRVTVAE 296 IRV +A+ Sbjct: 77 IRVNLAK 83
>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2| Length = 322 Score = 44.7 bits (104), Expect = 1e-04 Identities = 18/55 (32%), Positives = 35/55 (63%) Frame = -2 Query: 472 LFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 +FS+ G++++ ++ D+ +G+S+GF F+ Y A+ N +G+ + GR IRV Sbjct: 55 VFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRV 109
>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2| Length = 326 Score = 44.7 bits (104), Expect = 1e-04 Identities = 18/55 (32%), Positives = 35/55 (63%) Frame = -2 Query: 472 LFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 +FS+ G++++ ++ D+ +G+S+GF F+ Y A+ N +G+ + GR IRV Sbjct: 55 VFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRV 109
>REFP2_MOUSE (Q9JJW6) RNA and export factor-binding protein 2| Length = 218 Score = 44.7 bits (104), Expect = 1e-04 Identities = 28/76 (36%), Positives = 41/76 (53%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 GV ++ ++ LF+E G + A V YDR SGRS G V + + A+ GV LDGR Sbjct: 85 GVSDADIQELFAEFGTLKKAAVDYDR-SGRSLGTADVHFERRADALKAMKQYKGVPLDGR 143 Query: 319 QIRVTVAESKPREQRR 272 + + + S+ QRR Sbjct: 144 PMDIQLVASQIDPQRR 159
>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) (Proline-rich Vg1 mRNA-binding protein) Length = 360 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/69 (34%), Positives = 40/69 (57%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+ F+ G V + +IYD + R RGFGF+T+ V+ A+ N+ D+ G+++ V Sbjct: 130 LKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIMGKKVEVKR 188 Query: 301 AESKPREQR 275 AE PR+ + Sbjct: 189 AE--PRDSK 195 Score = 42.4 bits (98), Expect = 7e-04 Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 7/75 (9%) Frame = -2 Query: 484 TLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISN----LDGVDLDGRQ 317 TL + FS+ G+V+D ++ D+ + +SRGFGFV + + V +++ LDG ++D + Sbjct: 25 TLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKP 84 Query: 316 IR---VTVAESKPRE 281 + S+PRE Sbjct: 85 CTPRGMQPERSRPRE 99
>YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 in chromosome I| Length = 297 Score = 44.3 bits (103), Expect = 2e-04 Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 1/66 (1%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+ +FS+ G V +++ + + SRGFGF+++ + +E +AI NL+ + GR + V Sbjct: 117 LQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDNLNSQEFYGRVLNVQK 176 Query: 301 AE-SKP 287 A+ S+P Sbjct: 177 AKRSRP 182
>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1| Length = 825 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/66 (36%), Positives = 34/66 (51%) Frame = -2 Query: 487 STLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 S LE +FS+ GK+ + V +D S S+GF +V Y D A LDG GR + + Sbjct: 315 SDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYKELDGKHFQGRLMHI 374 Query: 307 TVAESK 290 A +K Sbjct: 375 LPATAK 380 Score = 32.3 bits (72), Expect = 0.73 Identities = 20/64 (31%), Positives = 32/64 (50%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 + +LF G++ +V D +RGFGF + SA E NA+ L L GR++ + Sbjct: 718 VRSLFGAYGQLRSVRVPKKFDRS-ARGFGFADFVSAREAENAMDALKNTHLLGRRLVLEF 776 Query: 301 AESK 290 A + Sbjct: 777 ANEE 780 Score = 29.3 bits (64), Expect = 6.2 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 11/83 (13%) Frame = -2 Query: 487 STLENLFSEQGKVLD----AKVIYDRDSGR-----SRGFGFVTYGSADEVNNAISNLDGV 335 ST F+E K LD A++ D R S GFGFV + + + A++ +DG Sbjct: 607 STTNERFTEVFKPLDGFVSARIKTKPDPKRPGKTLSMGFGFVDFRTKAQAQAALAAMDGY 666 Query: 334 DLDGRQ--IRVTVAESKPREQRR 272 LD + +R + E+RR Sbjct: 667 KLDQHELVVRASNKAMDAAEERR 689
>MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing protein 1| Length = 819 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/66 (36%), Positives = 32/66 (48%) Frame = -2 Query: 487 STLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 S LE +FS GK+ + V +D S+GF +V Y D A NLDG GR + + Sbjct: 309 SELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEAYRNLDGKIFQGRLLHI 368 Query: 307 TVAESK 290 A K Sbjct: 369 LPASQK 374 Score = 32.3 bits (72), Expect = 0.73 Identities = 20/64 (31%), Positives = 32/64 (50%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 + +LF G++ +V D +RGFGF + SA E NA+ L L GR++ + Sbjct: 713 VRSLFGAYGQLRSVRVPKKFDRS-ARGFGFADFVSAREAENAMDALKNTHLLGRRLVLEF 771 Query: 301 AESK 290 A + Sbjct: 772 ANEE 775
>SXL_MEGSC (O01671) Sex-lethal homolog| Length = 321 Score = 44.3 bits (103), Expect = 2e-04 Identities = 21/61 (34%), Positives = 38/61 (62%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L +LF G + +++ D +G S G+GFV +GS + AI+NL+G+ + ++I+V+ Sbjct: 94 LYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNLNGITVRNKRIKVSF 153 Query: 301 A 299 A Sbjct: 154 A 154
>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 407 Score = 43.9 bits (102), Expect = 2e-04 Identities = 24/69 (34%), Positives = 39/69 (56%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L F + G V + +IYD + R RGFGF+T+ V+ A+ N+ D+ G+++ V Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIMGKKVEVKR 187 Query: 301 AESKPREQR 275 AE PR+ + Sbjct: 188 AE--PRDSK 194 Score = 41.6 bits (96), Expect = 0.001 Identities = 21/57 (36%), Positives = 35/57 (61%) Frame = -2 Query: 484 TLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 TL + FS+ G+V+D ++ D+ + +SRGFGFV + + V +++ LDGR I Sbjct: 25 TLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHT-LDGRNI 80
>ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 341 Score = 43.9 bits (102), Expect = 2e-04 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 4/70 (5%) Frame = -2 Query: 484 TLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAIS----NLDGVDLDGRQ 317 +L N + + GK+ D V+ D S RSRGFGFVT+ S EV+ A++ ++DG ++ ++ Sbjct: 24 SLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKR 83 Query: 316 IRVTVAESKP 287 KP Sbjct: 84 AVAREESGKP 93 Score = 43.5 bits (101), Expect = 3e-04 Identities = 19/43 (44%), Positives = 27/43 (62%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 L + F E GK+ ++I DR SG+ RGFGFVT+ D V+ + Sbjct: 116 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 158
>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 406 Score = 43.9 bits (102), Expect = 2e-04 Identities = 24/69 (34%), Positives = 39/69 (56%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L F + G V + +IYD + R RGFGF+T+ V+ A+ N+ D+ G+++ V Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIMGKKVEVKR 187 Query: 301 AESKPREQR 275 AE PR+ + Sbjct: 188 AE--PRDSK 194 Score = 41.6 bits (96), Expect = 0.001 Identities = 21/57 (36%), Positives = 35/57 (61%) Frame = -2 Query: 484 TLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 TL + FS+ G+V+D ++ D+ + +SRGFGFV + + V +++ LDGR I Sbjct: 25 TLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHT-LDGRNI 80
>RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 430 Score = 43.9 bits (102), Expect = 2e-04 Identities = 21/71 (29%), Positives = 44/71 (61%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V+ S +E F + G ++ +++ D+ +G +GFG+V + + D V+ A+ L+ +L GR+ Sbjct: 298 VEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLAL-KLNNSELMGRK 356 Query: 316 IRVTVAESKPR 284 +RV + +K + Sbjct: 357 LRVMRSVNKEK 367
>ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 353 Score = 43.9 bits (102), Expect = 2e-04 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 4/70 (5%) Frame = -2 Query: 484 TLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAIS----NLDGVDLDGRQ 317 +L N + + GK+ D V+ D S RSRGFGFVT+ S EV+ A++ ++DG ++ ++ Sbjct: 36 SLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKR 95 Query: 316 IRVTVAESKP 287 KP Sbjct: 96 AVAREESGKP 105 Score = 43.5 bits (101), Expect = 3e-04 Identities = 19/43 (44%), Positives = 27/43 (62%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 L + F E GK+ ++I DR SG+ RGFGFVT+ D V+ + Sbjct: 128 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 170
>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2| (hnRNP A2(B)) Length = 358 Score = 43.5 bits (101), Expect = 3e-04 Identities = 18/43 (41%), Positives = 26/43 (60%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 L F E GK+ ++I D+ SG+ RGFGFVT+ D V+ + Sbjct: 116 LREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIV 158 Score = 43.1 bits (100), Expect = 4e-04 Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 4/70 (5%) Frame = -2 Query: 484 TLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAIS----NLDGVDLDGRQ 317 +L N + + G++ D V+ D S RSRGFGFVT+ +EV+ A+S +DG ++ ++ Sbjct: 24 SLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSARPHTIDGRVVEPKR 83 Query: 316 IRVTVAESKP 287 +KP Sbjct: 84 AVAREESAKP 93
>NUCL_MESAU (P08199) Nucleolin (Protein C23)| Length = 713 Score = 43.5 bits (101), Expect = 3e-04 Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%) Frame = -2 Query: 499 GVDNSTLENLFSE--QGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLD 326 G+ T E E +G V A+++ DR++G S+GFGFV + S ++ A ++ ++D Sbjct: 577 GLSEDTTEETLKESFEGSVR-ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEID 635 Query: 325 GRQIRVTVAESKPREQRRF 269 G +VT+ +KP+ + F Sbjct: 636 GN--KVTLDWAKPKGEGGF 652 Score = 32.7 bits (73), Expect = 0.56 Identities = 10/36 (27%), Positives = 26/36 (72%) Frame = -2 Query: 415 GRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 G+S+G+ F+ + S ++ A+++ + ++++GR IR+ Sbjct: 519 GKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRL 554 Score = 30.0 bits (66), Expect = 3.6 Identities = 11/48 (22%), Positives = 23/48 (47%) Frame = -2 Query: 415 GRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAESKPREQRR 272 G+S+G ++ + S + + G ++DGR + + K + Q R Sbjct: 426 GKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQER 473
>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 homolog 1| (hnRNP A3(A)) Length = 373 Score = 43.5 bits (101), Expect = 3e-04 Identities = 26/72 (36%), Positives = 39/72 (54%) Frame = -2 Query: 490 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIR 311 + +L F + GK+ D V+ D + RSRGFGFVTY +EV+ ++S +DGR + Sbjct: 40 DDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSARPH-KVDGRVVE 98 Query: 310 VTVAESKPREQR 275 A S+ R Sbjct: 99 PKRAVSREDSAR 110 Score = 35.8 bits (81), Expect = 0.066 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 L + GK+ +V+ DR SG+ RGF FVT+ D V+ + Sbjct: 134 LRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 176
>PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 494 Score = 43.5 bits (101), Expect = 3e-04 Identities = 22/63 (34%), Positives = 35/63 (55%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 LE +FS GK+L +VI D+ +G S + F+ + A S +D V +D R+I V Sbjct: 269 LELIFSRFGKILSCEVIRDQKTGDSLQYAFIEFEDKKSCEEAYSKMDSVLIDDRRIHVDF 328 Query: 301 AES 293 ++S Sbjct: 329 SQS 331
>YDB2_SCHPO (Q10355) Hypothetical RNA-binding protein C22E12.02 in chromosome I| Length = 219 Score = 43.5 bits (101), Expect = 3e-04 Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 2/74 (2%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V++ +L FSE ++ KV+ DR+ G++RGFGFV++ +D+ A +G + R Sbjct: 41 VNDESLYQAFSEYPSLVKTKVVRDRE-GKTRGFGFVSFKDSDQFLKAWREKNGKYIGSRP 99 Query: 316 IRVTVAES--KPRE 281 ++++ A S KP E Sbjct: 100 VKLSRATSDVKPNE 113
>NUCL_MOUSE (P09405) Nucleolin (Protein C23)| Length = 706 Score = 43.5 bits (101), Expect = 3e-04 Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%) Frame = -2 Query: 499 GVDNSTLENLFSE--QGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLD 326 G+ T E E +G V A+++ DR++G S+GFGFV + S ++ A ++ ++D Sbjct: 574 GLSEDTTEETLKESFEGSVR-ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEID 632 Query: 325 GRQIRVTVAESKPREQRRF 269 G +VT+ +KP+ + F Sbjct: 633 GN--KVTLDWAKPKGEGGF 649 Score = 30.0 bits (66), Expect = 3.6 Identities = 11/48 (22%), Positives = 23/48 (47%) Frame = -2 Query: 415 GRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAESKPREQRR 272 G+S+G ++ + S + + G ++DGR + + K + Q R Sbjct: 427 GKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQER 474
>NUCL_RAT (P13383) Nucleolin (Protein C23)| Length = 712 Score = 43.5 bits (101), Expect = 3e-04 Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%) Frame = -2 Query: 499 GVDNSTLENLFSE--QGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLD 326 G+ T E E +G V A+++ DR++G S+GFGFV + S ++ A ++ ++D Sbjct: 580 GLSEDTTEETLKESFEGSVR-ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEID 638 Query: 325 GRQIRVTVAESKPREQRRF 269 G +VT+ +KP+ + F Sbjct: 639 GN--KVTLDWAKPKGEGGF 655 Score = 32.7 bits (73), Expect = 0.56 Identities = 10/36 (27%), Positives = 26/36 (72%) Frame = -2 Query: 415 GRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 G+S+G+ F+ + S ++ A+++ + ++++GR IR+ Sbjct: 522 GKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRL 557 Score = 31.2 bits (69), Expect = 1.6 Identities = 12/48 (25%), Positives = 23/48 (47%) Frame = -2 Query: 415 GRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAESKPREQRR 272 GRS+G ++ + S + + G ++DGR + + K + Q R Sbjct: 429 GRSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQER 476
>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 43.5 bits (101), Expect = 3e-04 Identities = 19/66 (28%), Positives = 36/66 (54%) Frame = -2 Query: 487 STLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 S L F G + ++Y++ SG+ RG+ F+ Y ++++A + DG +DGR++ V Sbjct: 117 SKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLV 176 Query: 307 TVAESK 290 V + Sbjct: 177 DVERGR 182
>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 homolog 2| (hnRNP A3(B)) Length = 385 Score = 43.5 bits (101), Expect = 3e-04 Identities = 26/72 (36%), Positives = 39/72 (54%) Frame = -2 Query: 490 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIR 311 + +L F + GK+ D V+ D + RSRGFGFVTY +EV+ ++S +DGR + Sbjct: 40 DDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSARPH-KVDGRVVE 98 Query: 310 VTVAESKPREQR 275 A S+ R Sbjct: 99 PKRAVSREDSAR 110 Score = 38.1 bits (87), Expect = 0.013 Identities = 17/43 (39%), Positives = 25/43 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 L + F GK+ +V+ DR SG+ RGF FVT+ D V+ + Sbjct: 134 LRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 176
>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 437 Score = 43.1 bits (100), Expect = 4e-04 Identities = 19/66 (28%), Positives = 35/66 (53%) Frame = -2 Query: 487 STLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 S L F G + ++Y + SG+ RG+ F+ Y ++++A + DG +DGR++ V Sbjct: 117 SKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLV 176 Query: 307 TVAESK 290 V + Sbjct: 177 DVERGR 182
>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70| kDa) (snRNP70) Length = 448 Score = 43.1 bits (100), Expect = 4e-04 Identities = 19/66 (28%), Positives = 35/66 (53%) Frame = -2 Query: 487 STLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 S L F G + ++Y + SG+ RG+ F+ Y ++++A + DG +DGR++ V Sbjct: 117 SKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLV 176 Query: 307 TVAESK 290 V + Sbjct: 177 DVERGR 182
>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660| (Poly(A)-binding protein At2g36660) (PABP) Length = 609 Score = 43.1 bits (100), Expect = 4e-04 Identities = 21/69 (30%), Positives = 37/69 (53%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V L FS+ G + K++ D + G+S+GFGFV + + +E +A+ G G+ Sbjct: 315 VTEEELRKHFSQCGTITSTKLMCD-EKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKP 373 Query: 316 IRVTVAESK 290 + V +A+ K Sbjct: 374 LYVAIAQKK 382 Score = 40.0 bits (92), Expect = 0.004 Identities = 21/63 (33%), Positives = 36/63 (57%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V N+ L+++F + G ++ KV D G+SRG+GFV + D + AI L+ + ++ Sbjct: 123 VTNAVLQDMFKKFGNIVSCKVATLED-GKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKE 181 Query: 316 IRV 308 I V Sbjct: 182 IYV 184 Score = 35.0 bits (79), Expect = 0.11 Identities = 21/74 (28%), Positives = 35/74 (47%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V L + F+E + ++ D SGRS +G+ + S + N AI + L+G+ Sbjct: 35 VTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKKNNSLLNGKM 94 Query: 316 IRVTVAESKPREQR 275 IRV + P +R Sbjct: 95 IRVMWSVRAPDARR 108
>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member| A1 (RNA-binding motif protein 1) Length = 496 Score = 43.1 bits (100), Expect = 4e-04 Identities = 24/68 (35%), Positives = 41/68 (60%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+ +F + G + + +I DR S +SRGF F+T+ + + NA +++G L G+ I+V Sbjct: 24 LKAVFGKHGPISEVLLIKDRTS-KSRGFAFITFENPADAKNAAKDMNGKSLHGKAIKVEQ 82 Query: 301 AESKPREQ 278 A+ KP Q Sbjct: 83 AK-KPSFQ 89
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 43.1 bits (100), Expect = 4e-04 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDA-KVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 +D L + FS G +L K++ D D+G S+G+ F+ + S D + AI ++G L R Sbjct: 111 IDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNR 170 Query: 319 QIRVTVAESKPREQRR 272 I V+ A K + R Sbjct: 171 PITVSYAFKKDSKGER 186 Score = 40.8 bits (94), Expect = 0.002 Identities = 22/68 (32%), Positives = 39/68 (57%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V L LF + G V++ + DR +G+ +G+GFV + S ++ + AI ++ + L G+ Sbjct: 24 VSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKP 83 Query: 316 IRVTVAES 293 IRV A + Sbjct: 84 IRVNKASA 91
>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1| Length = 632 Score = 43.1 bits (100), Expect = 4e-04 Identities = 21/53 (39%), Positives = 32/53 (60%) Frame = -2 Query: 442 AKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAESKPR 284 AK+I D +G SR +GFV + S E +A+ ++ G GR +R++VA K R Sbjct: 212 AKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVASPKSR 264
>SAP49_SCHPO (O14102) Spliceosome-associated protein 49| Length = 335 Score = 43.1 bits (100), Expect = 4e-04 Identities = 25/79 (31%), Positives = 43/79 (54%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VD L + FS G+++ A + ++GRS+G+GFV+Y S + + AI ++ L + Sbjct: 110 VDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKP 169 Query: 316 IRVTVAESKPREQRRF*DI 260 I V+ A + + R DI Sbjct: 170 ITVSYAFKREGKGERHGDI 188 Score = 32.3 bits (72), Expect = 0.73 Identities = 22/66 (33%), Positives = 31/66 (46%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V +S L L + G V++ + DR GFGF + +V A L+ V L G+ Sbjct: 22 VTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQILNQVKLFGKP 81 Query: 316 IRVTVA 299 IRV A Sbjct: 82 IRVNRA 87
>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding| protein SEB4) Length = 237 Score = 42.7 bits (99), Expect = 5e-04 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%) Frame = -2 Query: 490 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIR 311 +++L F G + +A VI DR +G+SRG+GFVT + A + + + +DGR+ Sbjct: 45 DASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKDPNPI-IDGRKAN 103 Query: 310 VTVA--ESKPR 284 V +A +KPR Sbjct: 104 VNLAYLGAKPR 114
>NUCL_PONPY (Q5RF26) Nucleolin| Length = 711 Score = 42.7 bits (99), Expect = 5e-04 Identities = 22/75 (29%), Positives = 44/75 (58%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 +++T E L + A+++ DR++G S+GFGFV + S ++ A ++ ++DG Sbjct: 582 EDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGN-- 639 Query: 313 RVTVAESKPREQRRF 269 +VT+ +KP+ + F Sbjct: 640 KVTLDWAKPKGEGGF 654 Score = 31.6 bits (70), Expect = 1.2 Identities = 10/37 (27%), Positives = 26/37 (70%) Frame = -2 Query: 418 SGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 +G+S+G+ F+ + S ++ A+++ + +++GR IR+ Sbjct: 520 NGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRL 556
>NUCL_MACFA (Q4R4J7) Nucleolin| Length = 710 Score = 42.7 bits (99), Expect = 5e-04 Identities = 22/75 (29%), Positives = 44/75 (58%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 +++T E L + A+++ DR++G S+GFGFV + S ++ A ++ ++DG Sbjct: 581 EDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGN-- 638 Query: 313 RVTVAESKPREQRRF 269 +VT+ +KP+ + F Sbjct: 639 KVTLDWAKPKGEGGF 653 Score = 31.6 bits (70), Expect = 1.2 Identities = 10/37 (27%), Positives = 26/37 (70%) Frame = -2 Query: 418 SGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 +G+S+G+ F+ + S ++ A+++ + +++GR IR+ Sbjct: 519 NGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRL 555
>NUCL_HUMAN (P19338) Nucleolin (Protein C23)| Length = 709 Score = 42.7 bits (99), Expect = 5e-04 Identities = 22/75 (29%), Positives = 44/75 (58%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 +++T E L + A+++ DR++G S+GFGFV + S ++ A ++ ++DG Sbjct: 580 EDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGN-- 637 Query: 313 RVTVAESKPREQRRF 269 +VT+ +KP+ + F Sbjct: 638 KVTLDWAKPKGEGGF 652 Score = 31.6 bits (70), Expect = 1.2 Identities = 10/37 (27%), Positives = 26/37 (70%) Frame = -2 Query: 418 SGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 +G+S+G+ F+ + S ++ A+++ + +++GR IR+ Sbjct: 518 NGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRL 554
>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription| termination factor ctf1) Length = 363 Score = 42.7 bits (99), Expect = 5e-04 Identities = 19/76 (25%), Positives = 39/76 (51%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V + +F++ G V K++ D ++G +G+GF + ++ A+ L+ +L R+ Sbjct: 18 VSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAVRKLNNSELGPRK 77 Query: 316 IRVTVAESKPREQRRF 269 IRV + PR + + Sbjct: 78 IRVEFPSNDPRRNQSY 93
>PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 551 Score = 42.7 bits (99), Expect = 5e-04 Identities = 22/66 (33%), Positives = 36/66 (54%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 LE +FS GK+L +VI D+ +G S + F+ + D+ A + V +D R+I V Sbjct: 278 LELIFSRFGKILSCEVIKDKKTGDSLQYAFIEFDKKDDAERAYFKMQNVLVDDRRIWVDF 337 Query: 301 AESKPR 284 ++S R Sbjct: 338 SQSVSR 343
>SXL_MUSDO (O17310) Sex-lethal homolog| Length = 324 Score = 42.7 bits (99), Expect = 5e-04 Identities = 20/65 (30%), Positives = 35/65 (53%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 + + LE +F + G ++ ++ D+ +GR RG FV + +E AIS L+ V +G Sbjct: 199 ITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIPEGAS 258 Query: 316 IRVTV 302 +TV Sbjct: 259 QPLTV 263
>RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 428 Score = 42.7 bits (99), Expect = 5e-04 Identities = 23/71 (32%), Positives = 43/71 (60%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VD S LE F + G ++ +++ + +G RGFG+V + + D V+ A+ L+ +L GR+ Sbjct: 296 VDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLAL-KLNNSELMGRK 354 Query: 316 IRVTVAESKPR 284 +RV + +K + Sbjct: 355 LRVMRSVNKEK 365
>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA| binding protein SEB4) (CLL-associated antigen KW-5) Length = 216 Score = 42.4 bits (98), Expect = 7e-04 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%) Frame = -2 Query: 490 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIR 311 +++L F G + +A VI DR +G+SRG+GFVT A + + + +DGR+ Sbjct: 24 DASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPI-IDGRKAN 82 Query: 310 VTVA--ESKPR 284 V +A +KPR Sbjct: 83 VNLAYLGAKPR 93
>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 42.4 bits (98), Expect = 7e-04 Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 3/70 (4%) Frame = -2 Query: 490 NSTLENL---FSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 N+T+E++ F + GKV DA +++D+ + R RGFGFVT+ S D V + + +++ + Sbjct: 119 NTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIHFHEINNK 177 Query: 319 QIRVTVAESK 290 + A+ K Sbjct: 178 MVECKKAQPK 187 Score = 32.3 bits (72), Expect = 0.73 Identities = 21/61 (34%), Positives = 32/61 (52%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L F + G+V + V+ D + RSRGFGFVT+ V+ ++ +LD + I V Sbjct: 36 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ-SRHELDSKTIDPKV 94 Query: 301 A 299 A Sbjct: 95 A 95
>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 42.4 bits (98), Expect = 7e-04 Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 3/70 (4%) Frame = -2 Query: 490 NSTLENL---FSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 N+T+E++ F + GKV DA +++D+ + R RGFGFVT+ S D V + + +++ + Sbjct: 119 NTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIHFHEINNK 177 Query: 319 QIRVTVAESK 290 + A+ K Sbjct: 178 MVECKKAQPK 187 Score = 32.3 bits (72), Expect = 0.73 Identities = 21/61 (34%), Positives = 32/61 (52%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L F + G+V + V+ D + RSRGFGFVT+ V+ ++ +LD + I V Sbjct: 36 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ-SRHELDSKTIDPKV 94 Query: 301 A 299 A Sbjct: 95 A 95
>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 42.4 bits (98), Expect = 7e-04 Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 3/70 (4%) Frame = -2 Query: 490 NSTLENL---FSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 N+T+E++ F + GKV DA +++D+ + R RGFGFVT+ S D V + + +++ + Sbjct: 119 NTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIHFHEINNK 177 Query: 319 QIRVTVAESK 290 + A+ K Sbjct: 178 MVECKKAQPK 187 Score = 32.3 bits (72), Expect = 0.73 Identities = 21/61 (34%), Positives = 32/61 (52%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L F + G+V + V+ D + RSRGFGFVT+ V+ ++ +LD + I V Sbjct: 36 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ-SRHELDSKTIDPKV 94 Query: 301 A 299 A Sbjct: 95 A 95
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 42.4 bits (98), Expect = 7e-04 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDA-KVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 VD L + FS G +L K++ D DSG S+GF F+ + S + + A+ ++G L R Sbjct: 111 VDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNR 170 Query: 319 QIRVTVAESKPREQRR 272 I V+ A + + R Sbjct: 171 AITVSYAFKRDSKGER 186 Score = 37.4 bits (85), Expect = 0.023 Identities = 21/68 (30%), Positives = 35/68 (51%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V S L L + G V+ + DR + +GFGFV + ++ + AI L+ + L G+ Sbjct: 24 VSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKP 83 Query: 316 IRVTVAES 293 I+V A + Sbjct: 84 IKVNKASA 91
>PPIL4_SCHPO (Q9UUE4) Peptidyl-prolyl cis-trans isomerase cyp6 (EC 5.2.1.8)| (PPIase cyp6) (Rotamase cyp8) Length = 432 Score = 42.4 bits (98), Expect = 7e-04 Identities = 20/71 (28%), Positives = 40/71 (56%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 LE +FS GK++ +VI D+++G S + F+ + + + V A + V +D +I V Sbjct: 260 LELIFSRFGKIISCQVIRDKETGDSLQYAFIEFDNKESVEKAYFKMQNVLIDDSRIHVDF 319 Query: 301 AESKPREQRRF 269 ++S R ++ + Sbjct: 320 SQSVARYRQYY 330
>PABPX_SCHPO (Q9P6M8) mRNA export factor crp79 (Polyadenylate-binding protein| crp79) (Poly(A)-binding protein) (PABP) (Meiotic expression up-regulated protein 5) Length = 710 Score = 42.0 bits (97), Expect = 0.001 Identities = 25/72 (34%), Positives = 39/72 (54%) Frame = -2 Query: 487 STLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 S LE+LFS G +L + + +SG S+G+GFV + + A L+G+ + ++I V Sbjct: 398 SQLEDLFSPFGSILSSMLACYPNSGISKGYGFVAFRQIEAAVRAKDTLNGMMVGKKRIFV 457 Query: 307 TVAESKPREQRR 272 AE K RR Sbjct: 458 CFAERKSDRIRR 469
>SXL_DROME (P19339) Protein sex-lethal| Length = 354 Score = 42.0 bits (97), Expect = 0.001 Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDG-- 323 + + L+ +F + G ++ ++ D+ +GR RG FV Y +E AIS L+ V +G Sbjct: 222 ITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGS 281 Query: 322 RQIRVTVAE 296 + + V +AE Sbjct: 282 QPLSVRLAE 290
>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog| Length = 342 Score = 42.0 bits (97), Expect = 0.001 Identities = 22/59 (37%), Positives = 36/59 (61%) Frame = -2 Query: 490 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 + +L+ F + G+++D V+ D + RSRGFGF+TY A V++A N +DGR + Sbjct: 30 DESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDA-QNARPHKVDGRVV 87
>RX21_DROME (Q24491) RNA-binding protein Rsf1 (RNA-binding protein Rox21)| Length = 197 Score = 41.6 bits (96), Expect = 0.001 Identities = 23/75 (30%), Positives = 39/75 (52%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V LE F++ GK+ + ++ GF FV + D+ A L+G +L G Q Sbjct: 18 VKKDDLEGEFTKYGKLNSVWIAFNPP-----GFAFVEFEHRDDAEKACDILNGSELLGSQ 72 Query: 316 IRVTVAESKPREQRR 272 +RV +++ +PR+ RR Sbjct: 73 LRVEISKGRPRQGRR 87
>NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NOP77)| Length = 685 Score = 41.6 bits (96), Expect = 0.001 Identities = 22/74 (29%), Positives = 39/74 (52%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V + L + FS + A V+ D + RSRGFGFV++ D+ A++ +G Sbjct: 37 VTDEQLADFFSNFAPIKHAVVVKDTNK-RSRGFGFVSFAVEDDTKEALAKARKTKFNGHI 95 Query: 316 IRVTVAESKPREQR 275 +RV +A+ + R ++ Sbjct: 96 LRVDIAKRRDRSKK 109 Score = 38.9 bits (89), Expect = 0.008 Identities = 23/70 (32%), Positives = 34/70 (48%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 D L+ +F G V++A + RD G+ GF FVT A+ N + +DGR++ Sbjct: 160 DPVKLKKIFGRYGTVVEATIPRKRD-GKLCGFAFVTMKKISNCRIALENTKDLKIDGRKV 218 Query: 313 RVTVAESKPR 284 V A K R Sbjct: 219 AVDFAVQKNR 228
>PPIL4_EMENI (Q5ARI5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 461 Score = 41.6 bits (96), Expect = 0.001 Identities = 21/63 (33%), Positives = 35/63 (55%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 LE +FS GK+L +VI D+ +G S + F+ + S + A + GV +D +I V Sbjct: 264 LELIFSRFGKILSCEVIRDKRTGDSLQYAFIEFESQKDCEQAYFKMQGVLIDDHRIHVDF 323 Query: 301 AES 293 ++S Sbjct: 324 SQS 326
>SXL_DROSU (Q24668) Protein sex-lethal| Length = 354 Score = 41.6 bits (96), Expect = 0.001 Identities = 18/58 (31%), Positives = 32/58 (55%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDG 323 + + L+ +F + G ++ ++ D+ +GR RG FV Y +E AIS L+ V +G Sbjct: 224 ITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEG 281
>TRA2_DROME (P19018) Transformer-2 sex-determining protein| Length = 264 Score = 41.6 bits (96), Expect = 0.001 Identities = 18/58 (31%), Positives = 34/58 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 + LF++ G + +++ D + RSRGF F+ + + A + G+++DGR+IRV Sbjct: 113 VRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRV 170
>RSD1_SCHPO (O13845) RNA-binding protein rsd1| Length = 604 Score = 41.6 bits (96), Expect = 0.001 Identities = 17/44 (38%), Positives = 26/44 (59%) Frame = -2 Query: 421 DSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAESK 290 D RS+GFG++ Y + NA+ ++G DL GR +RV + K Sbjct: 375 DQNRSKGFGYIQYRNPISARNALEKMNGFDLAGRNMRVCLGNDK 418 Score = 41.6 bits (96), Expect = 0.001 Identities = 24/70 (34%), Positives = 39/70 (55%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L + F + G V DA+++ D+ SGRS+G +V + D V AI+ L G L G + V + Sbjct: 256 LYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAIA-LSGKRLLGLPVIVQL 314 Query: 301 AESKPREQRR 272 E++ + R Sbjct: 315 TEAEKNRKAR 324
>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15| Length = 296 Score = 41.2 bits (95), Expect = 0.002 Identities = 17/55 (30%), Positives = 34/55 (61%) Frame = -2 Query: 475 NLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIR 311 +L S G V++ K+++D +GRS+G+ F+ + + +A+ NL+G L R ++ Sbjct: 36 DLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNLNGYQLGSRFLK 90
>RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 375 Score = 41.2 bits (95), Expect = 0.002 Identities = 21/71 (29%), Positives = 44/71 (61%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +++S LE F + G ++ +++ + +G RGFG+V + + D V+ A+ L+ +L GR+ Sbjct: 302 IEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLAL-KLNNSELMGRK 360 Query: 316 IRVTVAESKPR 284 +RV + +K + Sbjct: 361 LRVMRSVNKEK 371
>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1| (hnRNP A2(A)) Length = 346 Score = 41.2 bits (95), Expect = 0.002 Identities = 22/57 (38%), Positives = 34/57 (59%) Frame = -2 Query: 484 TLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 +L N + + G + D V+ D S RSRGFGFVT+ +EV+ A++ +DGR + Sbjct: 24 SLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMATRPHT-IDGRVV 79 Score = 40.0 bits (92), Expect = 0.004 Identities = 17/43 (39%), Positives = 25/43 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 L F E GK+ ++I D+ SG+ RGF FVT+ D V+ + Sbjct: 116 LREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIV 158
>CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)| (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (Deadenylation factor EDEN-BP) (Brain protein F41) Length = 486 Score = 41.2 bits (95), Expect = 0.002 Identities = 20/64 (31%), Positives = 36/64 (56%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L +F G V+ AKV D+ + S+ FGFV+Y + AI +++G + ++++V + Sbjct: 417 LLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQL 476 Query: 301 AESK 290 SK Sbjct: 477 KRSK 480
>CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)| (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (50 kDa Nuclear polyadenylated RNA-binding protein) (EDEN-BP) Length = 486 Score = 41.2 bits (95), Expect = 0.002 Identities = 20/64 (31%), Positives = 36/64 (56%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L +F G V+ AKV D+ + S+ FGFV+Y + AI +++G + ++++V + Sbjct: 417 LLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQL 476 Query: 301 AESK 290 SK Sbjct: 477 KRSK 480
>PPIL4_CRYNE (Q5KNY5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 504 Score = 40.8 bits (94), Expect = 0.002 Identities = 21/69 (30%), Positives = 36/69 (52%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 LE +FS GK+L +V+ D+ SG S + F+ + + A + V +D R+I V Sbjct: 262 LELIFSRFGKILSCEVVRDKKSGDSLQYAFIEFDEREAAEQAYFKMQNVLVDDRRIWVDF 321 Query: 301 AESKPREQR 275 ++S + R Sbjct: 322 SQSVAKMNR 330
>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (APOBEC-1-binding protein 1) (ABBP-1) Length = 331 Score = 40.8 bits (94), Expect = 0.002 Identities = 21/56 (37%), Positives = 34/56 (60%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 L++ F++ G+V+D + D ++GRSRGFGF+ + A V + + LDGR I Sbjct: 84 LKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEH-RLDGRVI 138
>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1| Length = 841 Score = 40.4 bits (93), Expect = 0.003 Identities = 23/63 (36%), Positives = 34/63 (53%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L FS+QG V D K++ R+ G SR F F+ Y SAD A+ + +D +I V Sbjct: 18 LREFFSKQGDVTDVKLMKKRN-GESRKFAFIGYKSADAAERAVKYFNKSFIDTARIEVEF 76 Query: 301 AES 293 A++ Sbjct: 77 AKT 79 Score = 37.4 bits (85), Expect = 0.023 Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 2/47 (4%) Frame = -2 Query: 424 RDSGR--SRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAESK 290 ++SG+ S GFGFV + + ++ N AIS LDG LDG ++++ ++ + Sbjct: 655 KNSGKTLSMGFGFVEFRTKEQANVAISTLDGHVLDGHKLQLKLSHKQ 701 Score = 37.0 bits (84), Expect = 0.030 Identities = 23/65 (35%), Positives = 33/65 (50%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L LF G++ +V D +RGF FV + E A+S L+GV L GR++ + Sbjct: 733 LLELFGAFGQLKSVRVPKKFDQS-ARGFAFVEFNLMKEAETAMSQLEGVHLLGRRLVMQY 791 Query: 301 AESKP 287 AE P Sbjct: 792 AEQDP 796 Score = 36.6 bits (83), Expect = 0.039 Identities = 17/62 (27%), Positives = 33/62 (53%) Frame = -2 Query: 475 NLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAE 296 +LFS+ G + + + D +G+S+GF +V + ++ A +LD GR + + A+ Sbjct: 328 SLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRSLDKQIFQGRLLHILPAD 387 Query: 295 SK 290 K Sbjct: 388 KK 389
>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (CArG-binding factor-A) (CBF-A) Length = 285 Score = 40.4 bits (93), Expect = 0.003 Identities = 20/56 (35%), Positives = 34/56 (60%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 L++ F++ G+V+D + D ++GRSRGFGF+ + + V + + LDGR I Sbjct: 91 LKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQKEH-RLDGRVI 145
>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1| protein) (Protein P11) Length = 385 Score = 40.4 bits (93), Expect = 0.003 Identities = 20/52 (38%), Positives = 31/52 (59%) Frame = -2 Query: 469 FSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 F + G ++D V+ D + RSRGFGF+TY + ++NA N +DGR + Sbjct: 44 FEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNA-QNARPHKIDGRTV 94 Score = 38.9 bits (89), Expect = 0.008 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 D L F + G+++ ++ D+D+G+ RGF F+ + D V+ I Sbjct: 127 DEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKII 173
>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1| Length = 878 Score = 40.0 bits (92), Expect = 0.004 Identities = 19/61 (31%), Positives = 33/61 (54%) Frame = -2 Query: 472 LFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAES 293 LFS G++ + + D +G+S+GF +V + +AD A LD GR + + A++ Sbjct: 349 LFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAATAFVELDKQIFQGRLLHILPADA 408 Query: 292 K 290 K Sbjct: 409 K 409 Score = 36.2 bits (82), Expect = 0.051 Identities = 22/64 (34%), Positives = 32/64 (50%) Frame = -2 Query: 472 LFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAES 293 LFS G++ +V D +RGF FV + E NA+ L GV L GR++ + E Sbjct: 771 LFSSFGQLKSVRVPKKFDKS-ARGFAFVEFLLPKEAENAMDQLQGVHLLGRRLVMEFVEQ 829 Query: 292 KPRE 281 P + Sbjct: 830 DPED 833 Score = 31.6 bits (70), Expect = 1.2 Identities = 12/37 (32%), Positives = 24/37 (64%) Frame = -2 Query: 409 SRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVA 299 S GFGF + + ++ N IS ++G LDG ++++ ++ Sbjct: 696 SMGFGFAEFKTKEQANAVISAMEGTILDGHKLQLKLS 732
>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 328 Score = 40.0 bits (92), Expect = 0.004 Identities = 19/64 (29%), Positives = 37/64 (57%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 ++ F + GKV DA +++D+ + R RGFGFVT+ + D V + + +++ + + Sbjct: 126 VKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIHFHEINNKMVECKK 184 Query: 301 AESK 290 A+ K Sbjct: 185 AQPK 188 Score = 36.6 bits (83), Expect = 0.039 Identities = 21/62 (33%), Positives = 34/62 (54%) Frame = -2 Query: 484 TLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVT 305 +L + FS+ G++ + V+ D + RSRGFGFVT+ V+ + +LD + I Sbjct: 36 SLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ-PHHELDSKTIDPK 94 Query: 304 VA 299 VA Sbjct: 95 VA 96
>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 346 Score = 40.0 bits (92), Expect = 0.004 Identities = 19/64 (29%), Positives = 37/64 (57%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 ++ F + GKV DA +++D+ + R RGFGFVT+ + D V + + +++ + + Sbjct: 126 VKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIHFHEINNKMVECKK 184 Query: 301 AESK 290 A+ K Sbjct: 185 AQPK 188 Score = 36.6 bits (83), Expect = 0.039 Identities = 21/62 (33%), Positives = 34/62 (54%) Frame = -2 Query: 484 TLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVT 305 +L + FS+ G++ + V+ D + RSRGFGFVT+ V+ + +LD + I Sbjct: 36 SLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ-PHHELDSKTIDPK 94 Query: 304 VA 299 VA Sbjct: 95 VA 96
>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 39.7 bits (91), Expect = 0.005 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = -2 Query: 490 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 + +L F + G + D V+ D + RSRGFGFVTY +EV+ A+ Sbjct: 48 DDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM 93 Score = 39.3 bits (90), Expect = 0.006 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 L + F + GK+ +V+ DR SG+ RGF FVT+ D V+ + Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 184
>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 39.7 bits (91), Expect = 0.005 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = -2 Query: 490 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 + +L F + G + D V+ D + RSRGFGFVTY +EV+ A+ Sbjct: 48 DDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM 93 Score = 39.3 bits (90), Expect = 0.006 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 L + F + GK+ +V+ DR SG+ RGF FVT+ D V+ + Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 184
>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1| Length = 346 Score = 39.7 bits (91), Expect = 0.005 Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 8/69 (11%) Frame = -2 Query: 499 GVDNSTLENL----FSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISN----L 344 G+ ++T ++L +S+ G++ D V+ D + RSRGFGFVT+ EV+ A+ + Sbjct: 29 GLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHII 88 Query: 343 DGVDLDGRQ 317 DG +D ++ Sbjct: 89 DGKTVDPKR 97 Score = 36.2 bits (82), Expect = 0.051 Identities = 15/43 (34%), Positives = 26/43 (60%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 L F++ G V +++I D+ + + RGFGFVT+ D V+ + Sbjct: 130 LTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCV 172
>FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing locus on X| protein 1) Length = 415 Score = 39.7 bits (91), Expect = 0.005 Identities = 21/69 (30%), Positives = 37/69 (53%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+ +F + G V D ++I++ S+GFGFVT + A L G ++GR+I V Sbjct: 169 LKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNC 226 Query: 301 AESKPREQR 275 A ++ ++ Sbjct: 227 ATARVHSKK 235
>BOLL_MOUSE (Q924M5) Protein boule-like| Length = 281 Score = 39.7 bits (91), Expect = 0.005 Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 4/74 (5%) Frame = -2 Query: 499 GVDNSTLEN----LFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVD 332 G+D T EN FS+ G V + K++ DR +G S+G+GF+T+ + ++ + + ++ Sbjct: 39 GIDFKTNENDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFITFETQEDAQKILQEAEKLN 97 Query: 331 LDGRQIRVTVAESK 290 +++ + A K Sbjct: 98 YKDKKLNIGPAIRK 111
>ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 378 Score = 39.7 bits (91), Expect = 0.005 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = -2 Query: 490 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 + +L F + G + D V+ D + RSRGFGFVTY +EV+ A+ Sbjct: 48 DDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM 93 Score = 39.3 bits (90), Expect = 0.006 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAI 353 L + F + GK+ +V+ DR SG+ RGF FVT+ D V+ + Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 184
>HNRPM_MOUSE (Q9D0E1) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)| Length = 728 Score = 39.3 bits (90), Expect = 0.006 Identities = 24/62 (38%), Positives = 36/62 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+ +FS G V+ A ++ D+D G+SRG G VT+ + E AIS +G L R + V + Sbjct: 218 LKEVFSMAGVVVRADILEDKD-GKSRGIGIVTFEQSIEAVQAISMFNGQLLFDRPMHVKM 276 Query: 301 AE 296 E Sbjct: 277 DE 278 Score = 35.8 bits (81), Expect = 0.066 Identities = 20/60 (33%), Positives = 35/60 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L++ F+E G VL A + ++G+S+G G V + S + A ++G+ L GR+I V + Sbjct: 667 LKDKFNECGHVLYADI--KMENGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRI 724
>RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 39.3 bits (90), Expect = 0.006 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%) Frame = -2 Query: 487 STLENLFSEQGKVLDAKVIYDRDS---GRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 S L F G + ++Y++ S G+ RG+ F+ Y ++++A + DG +DGR+ Sbjct: 117 SKLRREFEVYGPIKRIHIVYNKGSEGSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRR 176 Query: 316 IRVTVAESK 290 + V V + Sbjct: 177 VLVDVERGR 185
>RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) Length = 448 Score = 39.3 bits (90), Expect = 0.006 Identities = 17/66 (25%), Positives = 36/66 (54%) Frame = -2 Query: 487 STLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 S L F G + +I+D++SG+ +G+ F+ Y +++ A + DG +D +++ V Sbjct: 116 SKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLV 175 Query: 307 TVAESK 290 V ++ Sbjct: 176 DVERAR 181
>IST3_YEAST (P40565) U2 snRNP component IST3 (U2 snRNP protein SNU17)| (Increased sodium tolerance protein 3) Length = 148 Score = 39.3 bits (90), Expect = 0.006 Identities = 18/63 (28%), Positives = 34/63 (53%) Frame = -2 Query: 472 LFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAES 293 +FSE G +D + D ++G S+GF ++ Y A+ NL+G + GR +++ Sbjct: 50 VFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTILAVDNLNGFKIGGRALKIDHTFY 109 Query: 292 KPR 284 +P+ Sbjct: 110 RPK 112
>BOLL_MACFA (Q8WP23) Protein boule-like| Length = 283 Score = 39.3 bits (90), Expect = 0.006 Identities = 18/68 (26%), Positives = 38/68 (55%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 + S L FS+ G V + K++ DR +G S+G+GFVT+ + ++ + + ++ +++ Sbjct: 45 NESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKL 103 Query: 313 RVTVAESK 290 + A K Sbjct: 104 NIGPAIRK 111
>BOLL_HUMAN (Q8N9W6) Protein boule-like| Length = 283 Score = 39.3 bits (90), Expect = 0.006 Identities = 18/68 (26%), Positives = 38/68 (55%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 + S L FS+ G V + K++ DR +G S+G+GFVT+ + ++ + + ++ +++ Sbjct: 45 NESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKL 103 Query: 313 RVTVAESK 290 + A K Sbjct: 104 NIGPAIRK 111
>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1| Length = 838 Score = 38.9 bits (89), Expect = 0.008 Identities = 19/63 (30%), Positives = 33/63 (52%) Frame = -2 Query: 478 ENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVA 299 + LFS G++ + V D +G+S+GF +V + + NA LD GR + + A Sbjct: 318 KQLFSPYGELEEVHVAVDTRTGQSKGFAYVLFKDPEHAANAYIELDKQIFQGRLLHILPA 377 Query: 298 ESK 290 ++K Sbjct: 378 DAK 380 Score = 35.4 bits (80), Expect = 0.086 Identities = 22/61 (36%), Positives = 32/61 (52%) Frame = -2 Query: 472 LFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAES 293 LFS G++ +V D +RGF FV + E NA+ L GV L GR++ + AE Sbjct: 731 LFSSFGQLKSVRVPKKFDKS-ARGFAFVEFLLPSEAENAMDQLQGVHLLGRRLVMQYAEQ 789 Query: 292 K 290 + Sbjct: 790 E 790 Score = 32.7 bits (73), Expect = 0.56 Identities = 12/44 (27%), Positives = 26/44 (59%) Frame = -2 Query: 421 DSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAESK 290 D S GFGF+ + + ++ I+ +DG +DG +I++ ++ + Sbjct: 653 DKKLSMGFGFIEFRTKEQAGAVIAAMDGAVIDGHKIQLKISHKQ 696
>HNRPM_HUMAN (P52272) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)| Length = 729 Score = 38.5 bits (88), Expect = 0.010 Identities = 24/62 (38%), Positives = 36/62 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+ +FS G V+ A ++ D+D G+SRG G VT+ + E AIS +G L R + V + Sbjct: 219 LKEVFSMAGVVVRADILEDKD-GKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKM 277 Query: 301 AE 296 E Sbjct: 278 DE 279 Score = 35.8 bits (81), Expect = 0.066 Identities = 20/60 (33%), Positives = 35/60 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L++ F+E G VL A + ++G+S+G G V + S + A ++G+ L GR+I V + Sbjct: 668 LKDKFNECGHVLYADI--KMENGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRI 725
>HNRPM_RAT (Q62826) Heterogeneous nuclear ribonucleoprotein M (hnRNP M) (M4| protein) Length = 689 Score = 38.5 bits (88), Expect = 0.010 Identities = 24/62 (38%), Positives = 36/62 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+ +FS G V+ A ++ D+D G+SRG G VT+ + E AIS +G L R + V + Sbjct: 179 LKEVFSMAGVVVRADILEDKD-GKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKM 237 Query: 301 AE 296 E Sbjct: 238 DE 239 Score = 35.8 bits (81), Expect = 0.066 Identities = 20/60 (33%), Positives = 35/60 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L++ F+E G VL A + ++G+S+G G V + S + A ++G+ L GR+I V + Sbjct: 628 LKDKFNECGHVLYADI--KMENGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRI 685
>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 952 Score = 38.5 bits (88), Expect = 0.010 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Frame = -2 Query: 484 TLENLFSEQGKVLDAKVIYDRDSGR---SRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 TL+ +FS+ G + + ++ S GFGFV Y ++ A+ L G +DG ++ Sbjct: 737 TLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKL 796 Query: 313 RVTVAE 296 V ++E Sbjct: 797 EVRISE 802 Score = 33.5 bits (75), Expect = 0.33 Identities = 18/58 (31%), Positives = 28/58 (48%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 LE LFS G + + D + + +GF FVT+ + A + +DG GR + V Sbjct: 416 LEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHV 473
>MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156)| Length = 600 Score = 38.5 bits (88), Expect = 0.010 Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+ +FS G V A + D+D G+SRG G VT+ A E AIS +G L R + V + Sbjct: 249 LKEVFSIAGTVKRADIKEDKD-GKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307 Query: 301 AE-SKPREQRR 272 + S P E+ R Sbjct: 308 DDKSVPHEEYR 318 Score = 35.0 bits (79), Expect = 0.11 Identities = 18/58 (31%), Positives = 34/58 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 L+ FS+ G V+ A++ ++G+S+G G V + S + A ++G+ + GR+I V Sbjct: 539 LKEKFSQCGHVMFAEI--KMENGKSKGCGTVRFDSPESAEKACRIMNGIKISGREIDV 594
>RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif protein 4)| Length = 419 Score = 38.5 bits (88), Expect = 0.010 Identities = 20/66 (30%), Positives = 35/66 (53%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 + +LFS+ GK+ + ++ + FGFV S E + AI NL L+G + V + Sbjct: 18 IRSLFSQYGKISECDIV--------KNFGFVHMDSKSEADEAIQNLHHYMLNGMAMNVEM 69 Query: 301 AESKPR 284 ++ KP+ Sbjct: 70 SKGKPK 75
>IF39_YEAST (P06103) Eukaryotic translation initiation factor 3 90 kDa subunit| (eIF3 p90) (Cell cycle regulation and translation initiation protein) Length = 763 Score = 38.5 bits (88), Expect = 0.010 Identities = 19/52 (36%), Positives = 31/52 (59%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLD 326 L +LFS+ GKV++ + D +G+++GF FV GS ++ I + G LD Sbjct: 99 LTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKSFHGKRLD 150
>IF34_YEAST (Q04067) Eukaryotic translation initiation factor 3 RNA-binding| subunit (eIF-3 RNA-binding subunit) (eIF3 p33) (Translation initiation factor eIF3, p33 subunit) Length = 274 Score = 38.1 bits (87), Expect = 0.013 Identities = 21/71 (29%), Positives = 36/71 (50%) Frame = -2 Query: 493 DNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQI 314 +NS E L + V+ ++++G+SRG FVT+ S + A+ LDG + Sbjct: 204 ENSLREELLFPFAPIPRVSVVRNKETGKSRGLAFVTFSSEEVAEQALRFLDGRGYMNLIL 263 Query: 313 RVTVAESKPRE 281 RV ++ K +E Sbjct: 264 RVEWSKPKVKE 274
>MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2)| Length = 591 Score = 38.1 bits (87), Expect = 0.013 Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 1/77 (1%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L+ +FS G V A + D+D G+SRG G VT+ A E AIS +G L R + V + Sbjct: 240 LKEVFSIAGTVKRADIKEDKD-GKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 298 Query: 301 AE-SKPREQRRF*DILT 254 + S P E R D T Sbjct: 299 DDKSVPHEDYRSHDSKT 315 Score = 36.6 bits (83), Expect = 0.039 Identities = 19/58 (32%), Positives = 35/58 (60%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 L+ FS+ G V+ A++ ++G+S+G G V + SA+ A ++G+ + GR+I V Sbjct: 530 LKEKFSQCGHVMFAEI--KMENGKSKGCGTVRFESAESAEKACRIMNGIKISGREIDV 585
>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 38.1 bits (87), Expect = 0.013 Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 4/61 (6%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAIS----NLDGVDLDGRQI 314 L++ FS+ G+V+D + D +GRSRGFGFV + ++ V+ + L+G +D ++ Sbjct: 113 LKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172 Query: 313 R 311 + Sbjct: 173 K 173
>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 38.1 bits (87), Expect = 0.013 Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 4/61 (6%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAIS----NLDGVDLDGRQI 314 L++ FS+ G+V+D + D +GRSRGFGFV + ++ V+ + L+G +D ++ Sbjct: 113 LKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172 Query: 313 R 311 + Sbjct: 173 K 173
>HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34)| Length = 429 Score = 38.1 bits (87), Expect = 0.013 Identities = 23/58 (39%), Positives = 32/58 (55%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 L FS+ GKV+ A +I R G RG G V + ++D+V+ AI DG R+I V Sbjct: 152 LTEFFSQIGKVVRADIITSR--GHHRGMGTVEFTNSDDVDRAIRQYDGAFFMDRKIFV 207 Score = 32.0 bits (71), Expect = 0.95 Identities = 19/64 (29%), Positives = 32/64 (50%) Frame = -2 Query: 487 STLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 S L +LF GKV +A++ YD G G V Y + D+ + I L+ + G + + Sbjct: 365 SDLYDLFETIGKVNNAELRYD-SKGAPTGIAVVEYDNVDDADVCIERLNNYNYGGCDLDI 423 Query: 307 TVAE 296 + A+ Sbjct: 424 SYAK 427
>IF34_CAEEL (Q19706) Probable eukaryotic translation initiation factor 3| subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3g) Length = 256 Score = 37.7 bits (86), Expect = 0.017 Identities = 17/54 (31%), Positives = 32/54 (59%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGV 335 ++ L +LF + G+V+ + D+ +G +GF FVT+ S D+ AI+ L+ + Sbjct: 187 MNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELNDI 240
>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core| protein A1-A) (PEN repeat clone P9) Length = 365 Score = 37.7 bits (86), Expect = 0.017 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 4/52 (7%) Frame = -2 Query: 499 GVD-NSTLENL---FSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNA 356 G+D +T ENL F + G ++D V+ D + RSRGFGF+TY + ++ A Sbjct: 37 GLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEA 88
>MSA1_SCHPO (Q10277) Multicopy suppressor of sporulation protein msa1| Length = 533 Score = 37.7 bits (86), Expect = 0.017 Identities = 20/64 (31%), Positives = 35/64 (54%) Frame = -2 Query: 487 STLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 +T+++ F + G +L KV+ D R + FV + + D+ + A+S LDGR IR+ Sbjct: 97 ATVKDYFQQWGPLLHVKVLKD---WLQRPYSFVQFQNTDDASKALSEAQNTILDGRHIRI 153 Query: 307 TVAE 296 A+ Sbjct: 154 ERAK 157 Score = 31.2 bits (69), Expect = 1.6 Identities = 18/68 (26%), Positives = 32/68 (47%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L +LFS+ GKV+D K+I+ + F F+ + S A+ + +RV Sbjct: 382 LVDLFSKYGKVIDCKIIH---QSKKPAFAFLRFDSQQAAYAAVCGKTRSPHQKKPLRVEF 438 Query: 301 AESKPREQ 278 + +P +Q Sbjct: 439 RQLRPMQQ 446
>FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protein 1| (TLS-associated protein with Ser-Arg repeats) (TLS-associated protein with SR repeats) (TASR) (TLS-associated serine-arginine protein) (TLS-associated SR protein) (Neural-specific SR pro Length = 262 Score = 37.7 bits (86), Expect = 0.017 Identities = 20/62 (32%), Positives = 31/62 (50%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L F G ++D V D + R RGF +V + + +A+ NLD + GRQI + Sbjct: 26 LRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQF 85 Query: 301 AE 296 A+ Sbjct: 86 AQ 87
>FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protein 1| (TLS-associated protein with Ser-Arg repeats) (TLS-associated protein with SR repeats) (TASR) (TLS-associated serine-arginine protein) (TLS-associated SR protein) (40 kDa SR-repressor pr Length = 262 Score = 37.7 bits (86), Expect = 0.017 Identities = 20/62 (32%), Positives = 31/62 (50%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L F G ++D V D + R RGF +V + + +A+ NLD + GRQI + Sbjct: 26 LRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQF 85 Query: 301 AE 296 A+ Sbjct: 86 AQ 87
>TRA2_DROVI (O02008) Transformer-2 sex-determining protein| Length = 272 Score = 37.7 bits (86), Expect = 0.017 Identities = 18/58 (31%), Positives = 34/58 (58%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 + LF++ G + +++ D + RSRGF F+ + + + A G+++DGR+IRV Sbjct: 121 VRELFNKFGPIERIQMVIDAHTHRSRGFCFIYFENLGDARVAKDACTGMEVDGRRIRV 178
>YBF1_YEAST (P34217) Hypothetical 73.8 kDa protein in SAS3-SEC17 intergenic| region Length = 668 Score = 37.4 bits (85), Expect = 0.023 Identities = 18/74 (24%), Positives = 36/74 (48%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 + L ++ E L Y D+G RG F + + +E I++L+G ++ GR+ Sbjct: 96 IKKEQLLDIIEEMDLPLPYAFNYHFDNGIFRGLAFANFTTPEETTQVITSLNGKEISGRK 155 Query: 316 IRVTVAESKPREQR 275 ++V + P+ +R Sbjct: 156 LKVEYKKMLPQAER 169
>BOULE_DROME (Q24207) Protein boule| Length = 228 Score = 37.4 bits (85), Expect = 0.023 Identities = 22/64 (34%), Positives = 35/64 (54%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L +FS G V K+I DR +G S+G+GFVT+ + E ++ + V L R++ + Sbjct: 49 LTRVFSAYGTVKSTKIIVDR-AGVSKGYGFVTFETEQEAQRLQADGECVVLRDRKLNIAP 107 Query: 301 AESK 290 A K Sbjct: 108 AIKK 111
>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)| Length = 305 Score = 37.4 bits (85), Expect = 0.023 Identities = 17/38 (44%), Positives = 25/38 (65%) Frame = -2 Query: 469 FSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNA 356 FS+ G V A++I D+ SG+ RGFGFV + + D + A Sbjct: 118 FSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKA 155 Score = 34.7 bits (78), Expect = 0.15 Identities = 22/71 (30%), Positives = 35/71 (49%) Frame = -2 Query: 487 STLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 S L F G + D V+ + + RSR FGFVTY + +E + A++ +DG + + Sbjct: 21 SGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHA-VDGNTVEL 79 Query: 307 TVAESKPREQR 275 A S+ R Sbjct: 80 KRAVSREDSAR 90
>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1| Length = 861 Score = 37.4 bits (85), Expect = 0.023 Identities = 18/61 (29%), Positives = 30/61 (49%) Frame = -2 Query: 478 ENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVA 299 + LFS G++ + V D +G S+GF +V + +E A LD GR + + A Sbjct: 342 KKLFSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQAYIELDKQIFQGRLLHILAA 401 Query: 298 E 296 + Sbjct: 402 D 402 Score = 33.9 bits (76), Expect = 0.25 Identities = 21/61 (34%), Positives = 32/61 (52%) Frame = -2 Query: 472 LFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAES 293 LF+ G++ +V D +RGF FV + E NA+ L GV L GR++ + AE Sbjct: 757 LFNSFGQLKSVRVPKKFDKS-ARGFAFVEFVLPKEAENAMDQLQGVHLLGRRLVMQPAEQ 815 Query: 292 K 290 + Sbjct: 816 E 816 Score = 32.3 bits (72), Expect = 0.73 Identities = 13/37 (35%), Positives = 24/37 (64%) Frame = -2 Query: 409 SRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVA 299 S GFGFV + + ++ IS +DG +DG +I++ ++ Sbjct: 685 SMGFGFVEFRTKEQATAVISAMDGTVIDGHKIQLKLS 721 Score = 32.3 bits (72), Expect = 0.73 Identities = 16/55 (29%), Positives = 33/55 (60%) Frame = -2 Query: 457 GKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAES 293 G + D +++ +R+ G+SR F F+ Y + + +A++ DG + +I V +A+S Sbjct: 37 GLITDLRILKNRE-GKSRRFAFIGYKNEQDALDAVNYFDGSFIYTSKIEVDMAKS 90
>HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 353 Score = 37.4 bits (85), Expect = 0.023 Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 4/61 (6%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAIS----NLDGVDLDGRQI 314 L++ FS+ G V+D + D +GRSRGFGFV + ++ V+ + L+G +D ++ Sbjct: 111 LKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 170 Query: 313 R 311 + Sbjct: 171 K 171
>SGN1_YEAST (P40561) RNA-binding protein SGN1| Length = 250 Score = 37.0 bits (84), Expect = 0.030 Identities = 17/59 (28%), Positives = 37/59 (62%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVT 305 +E+ F + G++ ++YDR++G +G+G++ + S A+ L+G +L G++I V+ Sbjct: 80 IEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKAL-QLNGGELKGKKIAVS 137
>IF34_SCHPO (P78795) Probable eukaryotic translation initiation factor 3| RNA-binding subunit (eIF-3 RNA-binding subunit) (eIF3 p33) (Translation initiation factor eIF3, p33 subunit) Length = 282 Score = 36.6 bits (83), Expect = 0.039 Identities = 22/67 (32%), Positives = 34/67 (50%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 L +LF G + + D+++GR++GF FV+Y D A LDG + +R Sbjct: 218 LRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKARDRLDGYGWNNLILRCEF 277 Query: 301 AESKPRE 281 SKPR+ Sbjct: 278 --SKPRD 282
>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)| (CeSF2/ASF) Length = 258 Score = 36.6 bits (83), Expect = 0.039 Identities = 20/63 (31%), Positives = 32/63 (50%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V +E++F + G++ D SGR F FV + + +A+ DG + DGR+ Sbjct: 20 VREKEVEDIFHKYGRIK----YVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRR 75 Query: 316 IRV 308 IRV Sbjct: 76 IRV 78
>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 960 Score = 36.6 bits (83), Expect = 0.039 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGR---SRGFGFVTYGSADEVNNAISNLDGVDLDGRQIR 311 L+ +FS+ G V + ++ S GFGFV Y ++ A+ L G +DG ++ Sbjct: 746 LKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLE 805 Query: 310 VTVAE 296 V ++E Sbjct: 806 VRISE 810 Score = 35.0 bits (79), Expect = 0.11 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRV 308 LE LFS+ G + + D + + +GF F+T+ + A S +DG GR + V Sbjct: 418 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHV 475
>IF4H_MOUSE (Q9WUK2) Eukaryotic translation initiation factor 4H (eIF-4H)| (Williams-Beuren syndrome chromosome region 1 protein homolog) Length = 247 Score = 36.6 bits (83), Expect = 0.039 Identities = 16/61 (26%), Positives = 35/61 (57%) Frame = -2 Query: 451 VLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAESKPREQRR 272 + +++ D+D+ + +GF +V + D + A++ DG L R +RV +AE + +++ Sbjct: 66 IRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALT-YDGALLGDRSLRVDIAEGRKQDKGG 124 Query: 271 F 269 F Sbjct: 125 F 125
>IF4H_HUMAN (Q15056) Eukaryotic translation initiation factor 4H (eIF-4H)| (Williams-Beuren syndrome chromosome region 1 protein) Length = 247 Score = 36.6 bits (83), Expect = 0.039 Identities = 16/61 (26%), Positives = 35/61 (57%) Frame = -2 Query: 451 VLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAESKPREQRR 272 + +++ D+D+ + +GF +V + D + A++ DG L R +RV +AE + +++ Sbjct: 66 IRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALT-YDGALLGDRSLRVDIAEGRKQDKGG 124 Query: 271 F 269 F Sbjct: 125 F 125
>EWS_MOUSE (Q61545) RNA-binding protein EWS| Length = 655 Score = 36.2 bits (82), Expect = 0.051 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 11/80 (13%) Frame = -2 Query: 493 DNSTLENL---FSEQGKVLDAK--------VIYDRDSGRSRGFGFVTYGSADEVNNAISN 347 DN TL++L F + G V K + D+++G+ +G V+Y A+ Sbjct: 369 DNVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEW 428 Query: 346 LDGVDLDGRQIRVTVAESKP 287 DG D G +++V++A KP Sbjct: 429 FDGKDFQGSKLKVSLARKKP 448
>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1| Length = 887 Score = 36.2 bits (82), Expect = 0.051 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = -2 Query: 472 LFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAES 293 LFS G++ + V D +G+S+GF +V + + NA LD GR + + E Sbjct: 364 LFSPFGELEEVHVALDTRTGQSKGFAYVLFKDSKNAVNAYVELDKQIFQGRLLHILPGEE 423 Query: 292 K 290 K Sbjct: 424 K 424 Score = 33.5 bits (75), Expect = 0.33 Identities = 13/37 (35%), Positives = 25/37 (67%) Frame = -2 Query: 409 SRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVA 299 S GFGFV + + ++ N I+ +DG +DG +I++ ++ Sbjct: 708 SMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLS 744 Score = 33.1 bits (74), Expect = 0.43 Identities = 21/59 (35%), Positives = 31/59 (52%) Frame = -2 Query: 472 LFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAE 296 LF+ G++ +V D +RGF FV + E NA+ L GV L GR++ + AE Sbjct: 782 LFNSFGQLKSVRVPKKFDKS-ARGFAFVEFLLPKEAENAMDQLHGVHLLGRRLVMQYAE 839
>G3BP_HUMAN (Q13283) Ras-GTPase-activating protein-binding protein 1 (EC| 3.6.1.-) (ATP-dependent DNA helicase VIII) (GAP SH3-domain-binding protein 1) (G3BP-1) (HDH-VIII) Length = 466 Score = 35.8 bits (81), Expect = 0.066 Identities = 22/74 (29%), Positives = 37/74 (50%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 VD S L++ F G V++ ++ G+ FGFV + ++ V +SN + G + Sbjct: 351 VDKSELKDFFQSYGNVVELRI---NSGGKLPNFGFVVFDDSEPVQKVLSNRP-IMFRG-E 405 Query: 316 IRVTVAESKPREQR 275 +R+ V E K R R Sbjct: 406 VRLNVEEKKTRAAR 419
>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)| Length = 633 Score = 35.4 bits (80), Expect = 0.086 Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Frame = -2 Query: 472 LFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDL-DGRQIRVTVAE 296 LF + G + D +++ D SG++RG+ F+T+ + A+ D ++ G+ + V ++ Sbjct: 184 LFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVCISV 243 Query: 295 SKPR 284 + R Sbjct: 244 ANNR 247
>RNPS1_RAT (Q6AYK1) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 35.4 bits (80), Expect = 0.086 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGR-SRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 V + +FS GK+ + +R S+G+ +V + + DE A+ ++DG +DG+ Sbjct: 172 VTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQ 231 Query: 319 QIRVT 305 +I T Sbjct: 232 EITAT 236
>RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 35.4 bits (80), Expect = 0.086 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGR-SRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 V + +FS GK+ + +R S+G+ +V + + DE A+ ++DG +DG+ Sbjct: 172 VTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQ 231 Query: 319 QIRVT 305 +I T Sbjct: 232 EITAT 236
>RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 35.4 bits (80), Expect = 0.086 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGR-SRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 V + +FS GK+ + +R S+G+ +V + + DE A+ ++DG +DG+ Sbjct: 172 VTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQ 231 Query: 319 QIRVT 305 +I T Sbjct: 232 EITAT 236
>RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 35.4 bits (80), Expect = 0.086 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGR-SRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 V + +FS GK+ + +R S+G+ +V + + DE A+ ++DG +DG+ Sbjct: 172 VTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQ 231 Query: 319 QIRVT 305 +I T Sbjct: 232 EITAT 236
>RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain 1 (SR-related| protein LDC2) Length = 305 Score = 35.4 bits (80), Expect = 0.086 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGR-SRGFGFVTYGSADEVNNAISNLDGVDLDGR 320 V + +FS GK+ + +R S+G+ +V + + DE A+ ++DG +DG+ Sbjct: 172 VTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQ 231 Query: 319 QIRVT 305 +I T Sbjct: 232 EITAT 236
>LARK_DROME (Q94901) RNA-binding protein lark| Length = 352 Score = 35.4 bits (80), Expect = 0.086 Identities = 19/66 (28%), Positives = 35/66 (53%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 + LF + G V++ ++ R +GFV +V +AI L+G +DG+ ++V V Sbjct: 102 VRELFQKYGTVVECDIV--------RNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQV 153 Query: 301 AESKPR 284 + S+ R Sbjct: 154 STSRVR 159
>RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interacting protein 2| Length = 383 Score = 35.4 bits (80), Expect = 0.086 Identities = 15/52 (28%), Positives = 26/52 (50%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNL 344 G + L L GK++ K I D+ + + +G+GFV + S A++ L Sbjct: 68 GTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSSAQKAVTAL 119 Score = 32.0 bits (71), Expect = 0.95 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDG 338 +D LE + G+V+ +++ D SG SRG GF S ++ I++ +G Sbjct: 148 MDEQELEGMLKPFGQVISTRILRDT-SGASRGVGFARMESTEKCEAIITHFNG 199
>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 298 Score = 35.0 bits (79), Expect = 0.11 Identities = 18/69 (26%), Positives = 41/69 (59%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D + + + F+ G V + K+I DR +G S+G+GFV++ + +V + + ++ G++ Sbjct: 51 MDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQKIVES--QINFHGKK 107 Query: 316 IRVTVAESK 290 +++ A K Sbjct: 108 LKLGPAIRK 116
>DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 295 Score = 35.0 bits (79), Expect = 0.11 Identities = 18/69 (26%), Positives = 41/69 (59%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D + + + F+ G V + K+I DR +G S+G+GFV++ + +V + + ++ G++ Sbjct: 51 MDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVES--QINFHGKK 107 Query: 316 IRVTVAESK 290 +++ A K Sbjct: 108 LKLGPAIRK 116
>DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) (DAZ homolog) (SPGY-like-autosomal) Length = 295 Score = 35.0 bits (79), Expect = 0.11 Identities = 18/69 (26%), Positives = 41/69 (59%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 +D + + + F+ G V + K+I DR +G S+G+GFV++ + +V + + ++ G++ Sbjct: 51 MDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVES--QINFHGKK 107 Query: 316 IRVTVAESK 290 +++ A K Sbjct: 108 LKLGPAIRK 116
>RBMS2_HUMAN (Q15434) RNA-binding motif, single-stranded-interacting protein 2| (Suppressor of CDC2 with RNA-binding motif 3) Length = 407 Score = 35.0 bits (79), Expect = 0.11 Identities = 15/52 (28%), Positives = 26/52 (50%) Frame = -2 Query: 499 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNL 344 G + L L GK++ K I D+ + + +G+GFV + S A++ L Sbjct: 66 GTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTAL 117 Score = 32.0 bits (71), Expect = 0.95 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDG 338 +D LE + G+V+ +++ D SG SRG GF S ++ I++ +G Sbjct: 146 MDEQELEGMLKPFGQVISTRILRDT-SGTSRGVGFARMESTEKCEAIITHFNG 197
>PPIE_SCHMA (Q26548) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) Length = 273 Score = 35.0 bits (79), Expect = 0.11 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = -2 Query: 427 DRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVA 299 D + + RGF FV + ++ +AI N++ ++ GR IRV VA Sbjct: 4 DYQTEKHRGFAFVEFEEVEDAMSAIDNMNESEIFGRTIRVNVA 46
>YNR5_YEAST (P53883) Hypothetical 45.7 kDa protein in RPS3-PSD1 intergenic| region Length = 403 Score = 35.0 bits (79), Expect = 0.11 Identities = 17/75 (22%), Positives = 35/75 (46%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQ 317 V + L F G ++ ++ DSG+ +GF F+ + + + N + + + GR Sbjct: 250 VTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEGSTNELKDKSCRKIAGRP 309 Query: 316 IRVTVAESKPREQRR 272 +R+ E + + Q R Sbjct: 310 LRMEYGEDRSKRQVR 324
>RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) Length = 403 Score = 35.0 bits (79), Expect = 0.11 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = -2 Query: 496 VDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDG 338 +D LEN+ G+V+ +V+ D SG SRG GF S ++ I + +G Sbjct: 152 MDEQELENMLKPFGQVISTRVLRD-SSGASRGVGFARMESTEKCEAVIGHFNG 203 Score = 33.1 bits (74), Expect = 0.43 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNL 344 L L GK++ K I D+ + + +G+GFV + S A+S L Sbjct: 78 LVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSAL 123
>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1| Length = 828 Score = 35.0 bits (79), Expect = 0.11 Identities = 22/63 (34%), Positives = 34/63 (53%) Frame = -2 Query: 481 LENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTV 302 ++ LF G + +V +S SRGF F Y SA E +A+S L G L GR++ + Sbjct: 719 VQKLFGAFGSLKTVRVPKKFNS-ESRGFAFAEYVSAKEAEHAMSALQGTHLLGRRLVLQY 777 Query: 301 AES 293 A++ Sbjct: 778 AQA 780 Score = 30.0 bits (66), Expect = 3.6 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = -2 Query: 409 SRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAESKPREQ 278 S GFGFV + S + A +DG LDG ++++ ++ E+ Sbjct: 650 SMGFGFVEFSSKEAAEIAQKAMDGHVLDGHKLQLKISNRGQDEE 693 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,365,689 Number of Sequences: 219361 Number of extensions: 1236974 Number of successful extensions: 3685 Number of sequences better than 10.0: 320 Number of HSP's better than 10.0 without gapping: 3399 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3655 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
