ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet100c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TESK2_RAT (Q924U5) Dual specificity testis-specific protein kina... 30 2.2
2TMKL1_ARATH (P33543) Putative kinase-like protein TMKL1 precursor 30 2.2
3TESK2_HUMAN (Q96S53) Dual specificity testis-specific protein ki... 29 4.9
4TESK2_MOUSE (Q8VCT9) Dual specificity testis-specific protein ki... 28 6.4
5CT174_HUMAN (Q5JPB2) Protein C20orf174 28 6.4
6EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase E... 28 8.3

>TESK2_RAT (Q924U5) Dual specificity testis-specific protein kinase 2 (EC|
           2.7.12.1) (Testicular protein kinase 2)
          Length = 570

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 415 FFELATACCSPSPSLRPNTKDILRRLEDI 329
           F +L   CC+  P LRP+ ++I + LE+I
Sbjct: 284 FLQLTFNCCNMDPKLRPSFEEIGKTLEEI 312



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>TMKL1_ARATH (P33543) Putative kinase-like protein TMKL1 precursor|
          Length = 674

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 9/26 (34%), Positives = 21/26 (80%)
 Frame = -1

Query: 409 ELATACCSPSPSLRPNTKDILRRLED 332
           +LA  CC+P  ++RP+ ++++++LE+
Sbjct: 626 KLAMGCCAPVTTVRPSMEEVVKQLEE 651



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>TESK2_HUMAN (Q96S53) Dual specificity testis-specific protein kinase 2 (EC|
           2.7.12.1) (Testicular protein kinase 2)
          Length = 571

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 415 FFELATACCSPSPSLRPNTKDILRRLEDI 329
           F +L   CC+  P LRP+  +I + LE+I
Sbjct: 284 FLQLTFNCCNMDPKLRPSFVEIGKTLEEI 312



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>TESK2_MOUSE (Q8VCT9) Dual specificity testis-specific protein kinase 2 (EC|
           2.7.12.1) (Testicular protein kinase 2)
          Length = 570

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 415 FFELATACCSPSPSLRPNTKDILRRLEDI 329
           F +L   CC+  P LRP+ ++I + L++I
Sbjct: 284 FLQLTFNCCNMDPKLRPSFEEIGKTLKEI 312



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>CT174_HUMAN (Q5JPB2) Protein C20orf174|
          Length = 1082

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -1

Query: 304 HRIAILCQHSDVARDRAEGTLNLCWTDNW 218
           HRI  LC  S +AR R  G +   W  NW
Sbjct: 478 HRIHRLCMGSTLARARLSGDVLNPWVPNW 506



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>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
            (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
            MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -1

Query: 409  ELATACCSPSPSLRPNTKDILRRLEDI 329
            ++A  C + +P+ RPN  D+L+ L++I
Sbjct: 1166 QIAMLCLAETPAKRPNMLDVLKALKEI 1192


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,953,177
Number of Sequences: 219361
Number of extensions: 963056
Number of successful extensions: 1853
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1853
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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