ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet100b09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AL645912.18| Mouse DNA sequence from clone RP23-134G19 on ch... 44 0.31
2gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 42 1.2
3gb|AC122903.4| Mus musculus BAC clone RP23-44N5 from chromosome ... 42 1.2
4gb|AC125278.1| Mus musculus BAC clone RP24-481N2 from 12, comple... 42 1.2
5gb|AC139209.10| Mus musculus chromosome 15, clone RP23-153G2, co... 42 1.2
6gb|AC164971.2| Mus musculus BAC clone RP23-441D19 from chromosom... 42 1.2
7gb|AC159619.2| Mus musculus BAC clone RP24-392J3 from chromosome... 42 1.2
8gb|AC001231.3| Homo sapiens chromosome 17, clone CTB-44J6, compl... 42 1.2
9gb|AC154727.2| Mus musculus BAC clone RP24-375I15 from 14, compl... 42 1.2
10gb|AC133936.5| Mus musculus BAC clone RP24-399H1 from chromosome... 42 1.2
11gb|AC145963.5| Gallus gallus BAC clone CH261-20A24 from chromoso... 42 1.2
12gb|AC112264.6| Mus musculus BAC clone RP23-421E18 from 1, comple... 42 1.2
13emb|CT030169.4| Mouse DNA sequence from clone RP24-292J1 on chro... 42 1.2
14emb|CT025528.10| Mouse DNA sequence from clone RP23-205O23 on ch... 42 1.2
15emb|AL606910.14| Mouse DNA sequence from clone RP23-282C23 on ch... 42 1.2
16emb|AL645567.7| Mouse DNA sequence from clone RP23-181A7 on chro... 42 1.2
17ref|XM_507879.1| PREDICTED: Pan troglodytes similar to Pro-neure... 40 4.8
18gb|AC090426.1| Homo sapiens chromosome 17 clone 205m17 map 17q21... 40 4.8
19ref|XM_871928.1| PREDICTED: Bos taurus similar to transient rece... 40 4.8
20ref|XM_601838.2| PREDICTED: Bos taurus similar to transient rece... 40 4.8
21ref|XM_460682.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 4.8
22ref|NM_008734.1| Mus musculus neuregulin 3 (Nrg3), mRNA 40 4.8
23ref|NM_001010848.2| Homo sapiens neuregulin 3 (NRG3), mRNA 40 4.8
24gb|AC091276.7| Mus musculus chromosome 15, clone RP23-167B4, com... 40 4.8
25emb|CR392350.11| Zebrafish DNA sequence from clone DKEY-61N21 in... 40 4.8
26gb|AC132596.5| Mus musculus BAC clone RP24-173K19 from chromosom... 40 4.8
27gb|AC102633.7| Mus musculus chromosome 15, clone RP23-326O18, co... 40 4.8
28gb|AC080112.15| Homo sapiens chromosome 17, clone CTD-2267D19, c... 40 4.8
29gb|AC018629.12| Homo sapiens chromosome 17, clone RP11-58O9, com... 40 4.8
30emb|AL096706.10|HSJ684F13 Human DNA sequence from clone RP4-684F... 40 4.8
31emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS... 40 4.8
32emb|AL672143.12| Mouse DNA sequence from clone RP23-467P3 on chr... 40 4.8
33emb|AL669853.5| Mouse DNA sequence from clone RP23-204F22 on chr... 40 4.8
34gb|AC183387.3| Pan troglodytes BAC clone CH251-113M12 from chrom... 40 4.8
35dbj|AK138643.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 40 4.8
36gb|AC099017.1| Drosophila melanogaster, chromosome 2L, region 37... 40 4.8
37emb|BX470068.7| Zebrafish DNA sequence from clone CH211-219C8 in... 40 4.8
38gb|AC007082.5|AC007082 Drosophila melanogaster, chromosome 2L, r... 40 4.8
39gb|DQ001411.1| Homo sapiens neuregulin-3 (NRG3) mRNA, complete c... 40 4.8
40gb|DQ338459.1| Homo sapiens neuregulin-3-like polypeptide mRNA, ... 40 4.8
41gb|AE003662.3| Drosophila melanogaster chromosome 2L, section 71... 40 4.8
42gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 4.8
43gb|AF091847.1|AF091847 Mus musculus otoconin-90 (Oc90) gene, par... 40 4.8
44emb|AL954311.13| Zebrafish DNA sequence from clone CH211-138M12 ... 40 4.8
45dbj|AB094591.1| Allium fistulosum lfs mRNA for lachrymatory fact... 40 4.8
46dbj|AB094590.1| Allium fistulosum lfs mRNA for lachrymatory fact... 40 4.8
47gb|AC138307.2| Mus musculus BAC clone RP24-159M5 from 12, comple... 40 4.8
48emb|CT030231.6| Mouse DNA sequence from clone RP24-331M15 on chr... 40 4.8
49gb|AF010130.1|AF010130 Mus musculus neuregulin-3 (NRG3) mRNA, co... 40 4.8

>emb|AL645912.18| Mouse DNA sequence from clone RP23-134G19 on chromosome 11 Contains the
             5' end of the gene for a novel protein similar to human
             KIBRA, a pseudogene similar to part of actin, the Odz2
             gene for odd Oz/ten-m homolog 2 (Drosophila) and two CpG
             islands, complete sequence
          Length = 186736

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 136   caacactactacaccaaccaaccaac 161
             |||||| |||||||||||||||||||
Sbjct: 41458 caacaccactacaccaaccaaccaac 41483



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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 268     caggctggggcggacgtcaac 288
               |||||||||||||||||||||
Sbjct: 2870320 caggctggggcggacgtcaac 2870340



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>gb|AC122903.4| Mus musculus BAC clone RP23-44N5 from chromosome 1, complete sequence
          Length = 169832

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 13    tggatatatatatgcccagga 33
             |||||||||||||||||||||
Sbjct: 89927 tggatatatatatgcccagga 89907



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>gb|AC125278.1| Mus musculus BAC clone RP24-481N2 from 12, complete sequence
          Length = 132398

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 13   tggatatatatatgcccagga 33
            |||||||||||||||||||||
Sbjct: 9304 tggatatatatatgcccagga 9284



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>gb|AC139209.10| Mus musculus chromosome 15, clone RP23-153G2, complete sequence
          Length = 211178

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     tggatatatatatgcccagga 33
              |||||||||||||||||||||
Sbjct: 210850 tggatatatatatgcccagga 210830



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>gb|AC164971.2| Mus musculus BAC clone RP23-441D19 from chromosome 9, complete sequence
          Length = 213482

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     tggatatatatatgcccagga 33
              |||||||||||||||||||||
Sbjct: 152024 tggatatatatatgcccagga 152004



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>gb|AC159619.2| Mus musculus BAC clone RP24-392J3 from chromosome 12, complete sequence
          Length = 171965

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     tggatatatatatgcccagga 33
              |||||||||||||||||||||
Sbjct: 169823 tggatatatatatgcccagga 169803



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>gb|AC001231.3| Homo sapiens chromosome 17, clone CTB-44J6, complete sequence
          Length = 134457

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 154   caaccaacggtttaaaacacacaca 178
             |||||||| ||||||||||||||||
Sbjct: 49024 caaccaactgtttaaaacacacaca 49000



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>gb|AC154727.2| Mus musculus BAC clone RP24-375I15 from 14, complete sequence
          Length = 189907

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 250   aatgctaggccatatctgcag 270
             |||||||||||||||||||||
Sbjct: 75263 aatgctaggccatatctgcag 75283



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>gb|AC133936.5| Mus musculus BAC clone RP24-399H1 from chromosome 6, complete sequence
          Length = 177971

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 13    tggatatatatatgcccagga 33
             |||||||||||||||||||||
Sbjct: 83139 tggatatatatatgcccagga 83119



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>gb|AC145963.5| Gallus gallus BAC clone CH261-20A24 from chromosome unknown, complete
             sequence
          Length = 185318

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 322   ctgcagccttgctggtgcttt 342
             |||||||||||||||||||||
Sbjct: 26934 ctgcagccttgctggtgcttt 26914



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>gb|AC112264.6| Mus musculus BAC clone RP23-421E18 from 1, complete sequence
          Length = 185468

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 13    tggatatatatatgcccagga 33
             |||||||||||||||||||||
Sbjct: 26009 tggatatatatatgcccagga 25989



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>emb|CT030169.4| Mouse DNA sequence from clone RP24-292J1 on chromosome 12, complete
              sequence
          Length = 178789

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     tggatatatatatgcccagga 33
              |||||||||||||||||||||
Sbjct: 156662 tggatatatatatgcccagga 156642



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>emb|CT025528.10| Mouse DNA sequence from clone RP23-205O23 on chromosome 14, complete
             sequence
          Length = 224168

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 250   aatgctaggccatatctgcag 270
             |||||||||||||||||||||
Sbjct: 24825 aatgctaggccatatctgcag 24805



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>emb|AL606910.14| Mouse DNA sequence from clone RP23-282C23 on chromosome 4, complete
              sequence
          Length = 185210

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     tggatatatatatgcccagga 33
              |||||||||||||||||||||
Sbjct: 173643 tggatatatatatgcccagga 173623



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>emb|AL645567.7| Mouse DNA sequence from clone RP23-181A7 on chromosome X, complete
             sequence
          Length = 111339

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 13    tggatatatatatgcccagga 33
             |||||||||||||||||||||
Sbjct: 67735 tggatatatatatgcccagga 67715



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>ref|XM_507879.1| PREDICTED: Pan troglodytes similar to Pro-neuregulin-3 precursor
           (Pro-NRG3) (LOC450561), mRNA
          Length = 654

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 290 atttggggctggtgctagtt 309
           ||||||||||||||||||||
Sbjct: 427 atttggggctggtgctagtt 408



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>gb|AC090426.1| Homo sapiens chromosome 17 clone 205m17 map 17q21.1, complete sequence
          Length = 138999

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   taggccatatctgcaggctg 274
             ||||||||||||||||||||
Sbjct: 66449 taggccatatctgcaggctg 66468



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>ref|XM_871928.1| PREDICTED: Bos taurus similar to transient receptor potential
           cation channel, subfamily V, member 3, transcript
           variant 2 (LOC523538), mRNA
          Length = 2636

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 ggctggggcggacgtcaacg 289
           ||||||||||||||||||||
Sbjct: 708 ggctggggcggacgtcaacg 727



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>ref|XM_601838.2| PREDICTED: Bos taurus similar to transient receptor potential
           cation channel, subfamily V, member 3, transcript
           variant 1 (LOC523538), mRNA
          Length = 2373

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 ggctggggcggacgtcaacg 289
           ||||||||||||||||||||
Sbjct: 708 ggctggggcggacgtcaacg 727



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>ref|XM_460682.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F08272g)
           partial mRNA
          Length = 768

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 aaacacacacaagtcaagag 187
           ||||||||||||||||||||
Sbjct: 322 aaacacacacaagtcaagag 341



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>ref|NM_008734.1| Mus musculus neuregulin 3 (Nrg3), mRNA
          Length = 2538

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 290  atttggggctggtgctagtt 309
            ||||||||||||||||||||
Sbjct: 1114 atttggggctggtgctagtt 1095



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>ref|NM_001010848.2| Homo sapiens neuregulin 3 (NRG3), mRNA
          Length = 2091

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 290 atttggggctggtgctagtt 309
           ||||||||||||||||||||
Sbjct: 820 atttggggctggtgctagtt 801



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>gb|AC091276.7| Mus musculus chromosome 15, clone RP23-167B4, complete sequence
          Length = 255663

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      agcaagatggatatatatat 25
              ||||||||||||||||||||
Sbjct: 145002 agcaagatggatatatatat 144983



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>emb|CR392350.11| Zebrafish DNA sequence from clone DKEY-61N21 in linkage group 5, complete
              sequence
          Length = 230648

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 168    aaacacacacaagtcaagag 187
              ||||||||||||||||||||
Sbjct: 128623 aaacacacacaagtcaagag 128642



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>gb|AC132596.5| Mus musculus BAC clone RP24-173K19 from chromosome 12, complete sequence
          Length = 183629

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     agaaacaatggggtcagctt 75
              ||||||||||||||||||||
Sbjct: 180007 agaaacaatggggtcagctt 179988



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>gb|AC102633.7| Mus musculus chromosome 15, clone RP23-326O18, complete sequence
          Length = 225738

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     agcaagatggatatatatat 25
             ||||||||||||||||||||
Sbjct: 13872 agcaagatggatatatatat 13853



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>gb|AC080112.15| Homo sapiens chromosome 17, clone CTD-2267D19, complete sequence
          Length = 175014

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   taggccatatctgcaggctg 274
             ||||||||||||||||||||
Sbjct: 50374 taggccatatctgcaggctg 50393



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>gb|AC018629.12| Homo sapiens chromosome 17, clone RP11-58O9, complete sequence
          Length = 166234

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   taggccatatctgcaggctg 274
             ||||||||||||||||||||
Sbjct: 28372 taggccatatctgcaggctg 28353



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>emb|AL096706.10|HSJ684F13 Human DNA sequence from clone RP4-684F13 on chromosome 10 Contains the 5'
              end of the NRG3 gene for neuregulin 3 and two CpG islands,
              complete sequence
          Length = 117230

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    atttggggctggtgctagtt 309
              ||||||||||||||||||||
Sbjct: 105933 atttggggctggtgctagtt 105914



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>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
              hansenii
          Length = 2336804

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 168    aaacacacacaagtcaagag 187
              ||||||||||||||||||||
Sbjct: 660591 aaacacacacaagtcaagag 660610



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>emb|AL672143.12| Mouse DNA sequence from clone RP23-467P3 on chromosome 11 Contains part
             of a novel gene, complete sequence
          Length = 170167

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   ccatatctgcaggctggggc 278
             ||||||||||||||||||||
Sbjct: 23158 ccatatctgcaggctggggc 23177



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>emb|AL669853.5| Mouse DNA sequence from clone RP23-204F22 on chromosome 11 Contains
            part of the Abca13 gene for ATP-binding cassette
            sub-family A (ABC1) member 13, complete sequence
          Length = 205759

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 92   gaaaaacgtctttgacatgt 111
            ||||||||||||||||||||
Sbjct: 2410 gaaaaacgtctttgacatgt 2429



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>gb|AC183387.3| Pan troglodytes BAC clone CH251-113M12 from chromosome unknown, complete
              sequence
          Length = 175955

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     aacatggacagaaacaatgg 66
              ||||||||||||||||||||
Sbjct: 162667 aacatggacagaaacaatgg 162648



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>dbj|AK138643.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length
           enriched library, clone:A330091H12 product:neuregulin 3,
           full insert sequence
          Length = 3608

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 290 atttggggctggtgctagtt 309
           ||||||||||||||||||||
Sbjct: 692 atttggggctggtgctagtt 673



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>gb|AC099017.1| Drosophila melanogaster, chromosome 2L, region 37D-37E, BAC clone
             BACR27M12, complete sequence
          Length = 157766

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   accaaccaacggtttaaaac 171
             ||||||||||||||||||||
Sbjct: 13702 accaaccaacggtttaaaac 13721



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>emb|BX470068.7| Zebrafish DNA sequence from clone CH211-219C8 in linkage group 1,
              complete sequence
          Length = 210511

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    ggtttaaaacacacacaagt 181
              ||||||||||||||||||||
Sbjct: 148395 ggtttaaaacacacacaagt 148414



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>gb|AC007082.5|AC007082 Drosophila melanogaster, chromosome 2L, region 37D, BAC clone BACR28G24,
              complete sequence
          Length = 171375

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    accaaccaacggtttaaaac 171
              ||||||||||||||||||||
Sbjct: 119894 accaaccaacggtttaaaac 119913



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>gb|DQ001411.1| Homo sapiens neuregulin-3 (NRG3) mRNA, complete cds, alternatively
           spliced
          Length = 2091

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 290 atttggggctggtgctagtt 309
           ||||||||||||||||||||
Sbjct: 820 atttggggctggtgctagtt 801



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>gb|DQ338459.1| Homo sapiens neuregulin-3-like polypeptide mRNA, complete cds
          Length = 976

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 290 atttggggctggtgctagtt 309
           ||||||||||||||||||||
Sbjct: 104 atttggggctggtgctagtt 85



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>gb|AE003662.3| Drosophila melanogaster chromosome 2L, section 71 of 83 of the complete
              sequence
          Length = 266205

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    accaaccaacggtttaaaac 171
              ||||||||||||||||||||
Sbjct: 251466 accaaccaacggtttaaaac 251485



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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 80      gtcctttcagttgaaaaacg 99
               ||||||||||||||||||||
Sbjct: 2252803 gtcctttcagttgaaaaacg 2252784



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>gb|AF091847.1|AF091847 Mus musculus otoconin-90 (Oc90) gene, partial cds
          Length = 8142

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    agcaagatggatatatatat 25
            ||||||||||||||||||||
Sbjct: 6491 agcaagatggatatatatat 6510



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>emb|AL954311.13| Zebrafish DNA sequence from clone CH211-138M12 in linkage group 5,
              complete sequence
          Length = 168421

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    aaacacacacaagtcaagag 187
              ||||||||||||||||||||
Sbjct: 102694 aaacacacacaagtcaagag 102675



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>dbj|AB094591.1| Allium fistulosum lfs mRNA for lachrymatory factor synthase,
           complete cds, note:type-63E
          Length = 682

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 acggtttaaaacacacacaa 179
           ||||||||||||||||||||
Sbjct: 558 acggtttaaaacacacacaa 539



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>dbj|AB094590.1| Allium fistulosum lfs mRNA for lachrymatory factor synthase,
           complete cds, note:type-63K
          Length = 739

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 acggtttaaaacacacacaa 179
           ||||||||||||||||||||
Sbjct: 615 acggtttaaaacacacacaa 596



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>gb|AC138307.2| Mus musculus BAC clone RP24-159M5 from 12, complete sequence
          Length = 165732

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     agaaacaatggggtcagctt 75
              ||||||||||||||||||||
Sbjct: 131312 agaaacaatggggtcagctt 131331



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>emb|CT030231.6| Mouse DNA sequence from clone RP24-331M15 on chromosome 14, complete
              sequence
          Length = 163967

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    atttggggctggtgctagtt 309
              ||||||||||||||||||||
Sbjct: 103478 atttggggctggtgctagtt 103459



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>gb|AF010130.1|AF010130 Mus musculus neuregulin-3 (NRG3) mRNA, complete cds
          Length = 2538

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 290  atttggggctggtgctagtt 309
            ||||||||||||||||||||
Sbjct: 1114 atttggggctggtgctagtt 1095


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,858,768
Number of Sequences: 3902068
Number of extensions: 3858768
Number of successful extensions: 160039
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 159881
Number of HSP's gapped (non-prelim): 158
length of query: 360
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 338
effective length of database: 17,147,199,772
effective search space: 5795753522936
effective search space used: 5795753522936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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