>DLL3_RAT (O88671) Delta-like protein 3 precursor (Drosophila Delta homolog|
           3)
          Length = 589

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -3

Query: 244 CWCDGPASCECNRCALGGRRRILLGFSPGSSTSSCPR 134
           C   GP  C+ N CA GG        +PGS   +CPR
Sbjct: 272 CLLPGPGPCDGNPCANGGS----CSETPGSFECACPR 304

>CHSD_EMENI (P78611) Chitin synthase D (EC 2.4.1.16) (Chitin-UDP|
           acetyl-glucosaminyl transferase D) (Class-V chitin
           synthase D)
          Length = 1184

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 13/92 (14%)
 Frame = +3

Query: 117 RENRHHLGH----------ELVELPGEKPKRILLLPPNAHRLHSHEAGPSHQHYLRDSKT 266
           R +RHH  H          E  E  G + KR L+ P            PSH +YL   KT
Sbjct: 43  RHHRHHRSHSSRHQHDIDEERAEEGGIRRKRSLVKPERGRM------DPSHPNYLYRQKT 96

Query: 267 LNLSQFRRRNRRFAGNHPCL---GQSRSRASP 353
            N+  +        GN P +   G++ + ++P
Sbjct: 97  QNMPTY----NPMTGNEPLIHEEGEAETNSTP 124

>SAHH_METMP (Q6LYR8) Adenosylhomocysteinase (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
          Length = 415

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +3

Query: 117 RENRHHLGHELVELPGEKPKRILLLPPNAHRLHSHEAGPSHQHYLRDSK 263
           +EN+  L +E+ E+P E+  +I LL  ++      E  P  + YL D K
Sbjct: 364 KENKGKLENEVYEIPYEQDFKIALLKLHSMGADIDELSPEQRKYLSDWK 412

>UL70_HCMVA (P17149) Probable primase (DNA replication protein UL70)|
          Length = 946

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = +3

Query: 129 HHLGHELVELPGEKPKRILLLPPNAHRLHSHEAGPSHQHYLRDSKTLNLSQFRRR 293
           HH  H+L  LP   P R++L   +       +  PS +    ++++LN++++RRR
Sbjct: 749 HHPPHDLPALPLSPPPRVILSVRD-------KICPSTEANFIETRSLNVTRYRRR 796

>MEGF8_HUMAN (Q7Z7M0) Multiple epidermal growth factor-like domains 8 (EGF-like|
            domain-containing protein 4) (Multiple EGF-like domain
            protein 4)
          Length = 2386

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 204  VHWEGGGGSSWVFRRAAQPARAQDG 130
            +HWE  G SSW F  +   AR   G
Sbjct: 927  LHWEANGSSSWGFNASVGSARCGSG 951

>RNC_HUMAN (Q9NRR4) Ribonuclease III (EC 3.1.26.3) (RNase III) (Drosha) (p241)|
          Length = 1374

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
 Frame = +3

Query: 126 RHHLGHELVELPGEK--PKRILLLPPNAHRLHSHEAGPSHQHYLRDSKTLNLSQFRRRNR 299
           RH   + L + P E+  P+R+     + HR HSH  G  H+   R  +  +  + R+ +R
Sbjct: 205 RHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSR 264

Query: 300 --------RFAGNHPCLGQSRSRASPGSRH 365
                   R    H    +SR R     RH
Sbjct: 265 YRSDYDRGRTPSRHRSYERSRERERERHRH 294

>MEGF8_MOUSE (P60882) Multiple epidermal growth factor-like domains 8 (EGF-like|
            domain-containing protein 4) (Multiple EGF-like domain
            protein 4)
          Length = 2330

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 204  VHWEGGGGSSWVFRRAAQPARAQDG 130
            +HWE  G SSW F  +   AR   G
Sbjct: 927  LHWEANGSSSWGFNASVGSARCGSG 951

>UTY_HUMAN (O14607) Ubiquitously transcribed Y chromosome tetratricopeptide|
           repeat protein (Ubiquitously transcribed TPR protein on
           the Y chromosome)
          Length = 1347

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 19/54 (35%), Positives = 29/54 (53%)
 Frame = +1

Query: 106 ANVLGKTDTILGTSWLSCPAKNPRGSSSSLPMHTDYTHTRPVHHTSIT*EIVKP 267
           + +LG TDTIL  S  +C A +   S+ ++P     THT P +HT +     +P
Sbjct: 531 SKILGSTDTILLGS--NCIAGSE--SNGNVPYLQQNTHTLPHNHTDLNSSTEEP 580

>PDE3A_MOUSE (Q9Z0X4) cGMP-inhibited 3',5'-cyclic phosphodiesterase A (EC|
           3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase A)
           (CGI-PDE A)
          Length = 1141

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 10/97 (10%)
 Frame = +2

Query: 83  IKNTLTITLMCSGKQT--PSWARAG*AARRKTQEDPPPPSQCTP--------ITLTRGRS 232
           + +T T T   +G  T  P+  R   +A  K  E  P PS   P         TLT+ RS
Sbjct: 434 VSSTWTTTTSATGLPTLEPAPVRRDRSASIKPHE-APSPSAVNPDSWNAPGLTTLTKSRS 492

Query: 233 ITPAXXXXXXXXXXXXIQTQKSTVCRKSSMPRPKSQP 343
            T +             Q +   + + S +P P S P
Sbjct: 493 FTSSYAVSAANHVKAKKQNRPGGLAKISPVPSPSSSP 529

>IGSF8_HUMAN (Q969P0) Immunoglobulin superfamily member 8 precursor (CD81|
           partner 3) (Glu-Trp-Ile EWI motif containing protein 2)
           (EWI-2) (Keratinocytes-associated transmembrane protein
           4) (KCT-4) (LIR-D1) (CD316 antigen)
          Length = 613

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 144 ELVELPGEKPKRILLLPPNAHRLHSHEAGPSHQ 242
           EL   PG  P  + L+ P +HRL  H  GP  +
Sbjct: 507 ELGVRPGGGPVSVELVGPRSHRLRLHSLGPEDE 539

>AT2A1_CHICK (P13585) Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (EC|
           3.6.3.8) (Calcium pump 1) (SERCA1) (SR Ca(2+)-ATPase 1)
           (Calcium-transporting ATPase sarcoplasmic reticulum
           type, fast twitch skeletal muscle isoform) (Endoplasmic
           reticulum cla
          Length = 994

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 55  TITYHNVTYYQKYSHHNANVLG 120
           ++TYH +T++ + +HHNA   G
Sbjct: 864 SLTYHQLTHFMQCTHHNAEFEG 885

>PACS1_MOUSE (Q8K212) Phosphofurin acidic cluster sorting protein 1 (PACS-1)|
          Length = 961

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 14/62 (22%), Positives = 22/62 (35%)
 Frame = +2

Query: 161 RRKTQEDPPPPSQCTPITLTRGRSITPAXXXXXXXXXXXXIQTQKSTVCRKSSMPRPKSQ 340
           +++ Q+ PP P Q TP  L +  S + +              T  +      S P     
Sbjct: 30  QQQPQQQPPQPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGPG 89

Query: 341 PG 346
           PG
Sbjct: 90  PG 91

>PDE3A_RAT (Q62865) cGMP-inhibited 3',5'-cyclic phosphodiesterase A (EC|
           3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase A)
           (CGI-PDE A)
          Length = 1141

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 10/97 (10%)
 Frame = +2

Query: 83  IKNTLTITLMCSGKQT--PSWARAG*AARRKTQEDPPPPSQCTP--------ITLTRGRS 232
           + +T T T   +G  T  P+  R   +A  K  E  P PS   P        +TLT+ RS
Sbjct: 434 VSSTWTTTTSATGLPTLEPAPVRRDRSASIKPHE-APSPSAVNPDSWNAPVLMTLTKSRS 492

Query: 233 ITPAXXXXXXXXXXXXIQTQKSTVCRKSSMPRPKSQP 343
            T +             Q +   + + S +P P S P
Sbjct: 493 FTSSYAVSAANHVKAKKQNRPGGLDKISPVPSPSSSP 529


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,147,133
Number of Sequences: 219361
Number of extensions: 1214433
Number of successful extensions: 4065
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4057
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)