>ref|XM_549820.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2990

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 112/133 (84%)
 Strand = Plus / Minus

                                                                        
Query: 330  ctttgtaaggtagctatttccttgagcaagttcttgaacaccaacatatccttgggctgt 389
            ||||| || |||||||||||||| ||||  ||||| |||| || ||||||||||| | ||
Sbjct: 2709 ctttgcaacgtagctatttccttcagcagattcttaaacagcagcatatccttggacagt 2650

                                                                        
Query: 390  atgcggttcttgaaatgttccgtcaagcttgtcgagctggcggagccaccattctgttgt 449
            || ||||||||||| ||||| || |  ||||| ||||||||||| ||||||| ||| |||
Sbjct: 2649 atccggttcttgaagtgttcagttatacttgttgagctggcggaaccaccatgctgctgt 2590

                         
Query: 450  atgtaggtgcaca 462
            ||| |||||||||
Sbjct: 2589 atgaaggtgcaca 2577

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 112/133 (84%)
 Strand = Plus / Minus

                                                                          
Query: 330    ctttgtaaggtagctatttccttgagcaagttcttgaacaccaacatatccttgggctgt 389
              ||||| || |||||||||||||| ||||  ||||| |||| || ||||||||||| | ||
Sbjct: 155168 ctttgcaacgtagctatttccttcagcagattcttaaacagcagcatatccttggacagt 155109

                                                                          
Query: 390    atgcggttcttgaaatgttccgtcaagcttgtcgagctggcggagccaccattctgttgt 449
              || ||||||||||| ||||| || |  ||||| ||||||||||| ||||||| ||| |||
Sbjct: 155108 atccggttcttgaagtgttcagttatacttgttgagctggcggaaccaccatgctgctgt 155049

                           
Query: 450    atgtaggtgcaca 462
              ||| |||||||||
Sbjct: 155048 atgaaggtgcaca 155036

>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0672D08
          Length = 173729

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 112/133 (84%)
 Strand = Plus / Minus

                                                                          
Query: 330    ctttgtaaggtagctatttccttgagcaagttcttgaacaccaacatatccttgggctgt 389
              ||||| || |||||||||||||| ||||  ||||| |||| || ||||||||||| | ||
Sbjct: 152970 ctttgcaacgtagctatttccttcagcagattcttaaacagcagcatatccttggacagt 152911

                                                                          
Query: 390    atgcggttcttgaaatgttccgtcaagcttgtcgagctggcggagccaccattctgttgt 449
              || ||||||||||| ||||| || |  ||||| ||||||||||| ||||||| ||| |||
Sbjct: 152910 atccggttcttgaagtgttcagttatacttgttgagctggcggaaccaccatgctgctgt 152851

                           
Query: 450    atgtaggtgcaca 462
              ||| |||||||||
Sbjct: 152850 atgaaggtgcaca 152838

>dbj|AB111944.1| Oryza sativa (japonica cultivar-group) OsCSB mRNA for Cockayne
            syndrome group B, complete cds
          Length = 3564

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 112/133 (84%)
 Strand = Plus / Minus

                                                                        
Query: 330  ctttgtaaggtagctatttccttgagcaagttcttgaacaccaacatatccttgggctgt 389
            ||||| || |||||||||||||| ||||  ||||| |||| || ||||||||||| | ||
Sbjct: 3518 ctttgcaacgtagctatttccttcagcagattcttaaacagcagcatatccttggacagt 3459

                                                                        
Query: 390  atgcggttcttgaaatgttccgtcaagcttgtcgagctggcggagccaccattctgttgt 449
            || ||||||||||| ||||| || |  ||||| ||||||||||| ||||||| ||| |||
Sbjct: 3458 atccggttcttgaagtgttcagttatacttgttgagctggcggaaccaccatgctgctgt 3399

                         
Query: 450  atgtaggtgcaca 462
            ||| |||||||||
Sbjct: 3398 atgaaggtgcaca 3386

>dbj|AK064456.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-110-F11, full
            insert sequence
          Length = 2990

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 112/133 (84%)
 Strand = Plus / Minus

                                                                        
Query: 330  ctttgtaaggtagctatttccttgagcaagttcttgaacaccaacatatccttgggctgt 389
            ||||| || |||||||||||||| ||||  ||||| |||| || ||||||||||| | ||
Sbjct: 2709 ctttgcaacgtagctatttccttcagcagattcttaaacagcagcatatccttggacagt 2650

                                                                        
Query: 390  atgcggttcttgaaatgttccgtcaagcttgtcgagctggcggagccaccattctgttgt 449
            || ||||||||||| ||||| || |  ||||| ||||||||||| ||||||| ||| |||
Sbjct: 2649 atccggttcttgaagtgttcagttatacttgttgagctggcggaaccaccatgctgctgt 2590

                         
Query: 450  atgtaggtgcaca 462
            ||| |||||||||
Sbjct: 2589 atgaaggtgcaca 2577

>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0455C04
          Length = 147940

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 112/133 (84%)
 Strand = Plus / Minus

                                                                          
Query: 330    ctttgtaaggtagctatttccttgagcaagttcttgaacaccaacatatccttgggctgt 389
              ||||| || |||||||||||||| ||||  ||||| |||| || ||||||||||| | ||
Sbjct: 103714 ctttgcaacgtagctatttccttcagcagattcttaaacagcagcatatccttggacagt 103655

                                                                          
Query: 390    atgcggttcttgaaatgttccgtcaagcttgtcgagctggcggagccaccattctgttgt 449
              || ||||||||||| ||||| || |  ||||| ||||||||||| ||||||| ||| |||
Sbjct: 103654 atccggttcttgaagtgttcagttatacttgttgagctggcggaaccaccatgctgctgt 103595

                           
Query: 450    atgtaggtgcaca 462
              ||| |||||||||
Sbjct: 103594 atgaaggtgcaca 103582

>dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0402A09
          Length = 141966

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 112/133 (84%)
 Strand = Plus / Minus

                                                                          
Query: 330    ctttgtaaggtagctatttccttgagcaagttcttgaacaccaacatatccttgggctgt 389
              ||||| || |||||||||||||| ||||  ||||| |||| || ||||||||||| | ||
Sbjct: 140098 ctttgcaacgtagctatttccttcagcagattcttaaacagcagcatatccttggacagt 140039

                                                                          
Query: 390    atgcggttcttgaaatgttccgtcaagcttgtcgagctggcggagccaccattctgttgt 449
              || ||||||||||| ||||| || |  ||||| ||||||||||| ||||||| ||| |||
Sbjct: 140038 atccggttcttgaagtgttcagttatacttgttgagctggcggaaccaccatgctgctgt 139979

                           
Query: 450    atgtaggtgcaca 462
              ||| |||||||||
Sbjct: 139978 atgaaggtgcaca 139966

>ref|XM_420263.1| PREDICTED: Gallus gallus similar to 4930431B09Rik protein
           (LOC422282), mRNA
          Length = 1260

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 17  tcagattgcagtctgtttccctgtaaacat 46
           |||| |||||||||||||| ||||||||||
Sbjct: 592 tcagtttgcagtctgtttctctgtaaacat 563

>emb|CR788302.6| Zebrafish DNA sequence from clone DKEYP-38A10, complete sequence
          Length = 172778

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 221    atctttttatgcaagaatctactctt 246
              ||||||||||||| ||||||||||||
Sbjct: 161394 atctttttatgcaggaatctactctt 161419

>ref|NM_103506.1| Arabidopsis thaliana SCPL44; catalytic/ serine carboxypeptidase
           AT1G43780 (SCPL44) mRNA, complete cds
          Length = 1440

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 364 tgaacaccaacatatccttgg 384
           |||||||||||||||||||||
Sbjct: 487 tgaacaccaacatatccttgg 467

>gb|AY231731.1| Drosophila yakuba clone yak-em_CG15347 mRNA sequence
          Length = 411

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 451 tgtaggtgcacagctggcaga 471
           |||||||||||||||||||||
Sbjct: 208 tgtaggtgcacagctggcaga 188

>emb|AL590640.19| Human DNA sequence from clone RP11-40H20 on chromosome 1 Contains the
             5' end of the SLC9A1 gene for solute carrier family 9
             (sodium/hydrogen exchanger), isoform 1 (antiporter,
             Na+/H+, amiloride sensitive), a ribosomal protein L18a
             (RPL18A) pseudogene, a novel pseudogene (FLJ20420), a
             nucleophosmin (nucleolar phosphoprotein B23,
             numatrin)(NPM1) pseudogene, a mall nuclear
             ribonucleoprotein polypeptide E (SNRPE) pseudogene, a
             novel gene, the 5' end of a novel gene (KIAA1037) and a
             CpG island, complete sequence
          Length = 147052

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 344   tatttccttgagcaagttctt 364
             |||||||||||||||||||||
Sbjct: 18422 tatttccttgagcaagttctt 18442

>gb|AC006423.7|AC006423 Arabidopsis thaliana chromosome I BAC F28H19 genomic sequence, complete
             sequence
          Length = 131692

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 364   tgaacaccaacatatccttgg 384
             |||||||||||||||||||||
Sbjct: 41557 tgaacaccaacatatccttgg 41537

>gb|AC102052.7| Mus musculus chromosome 3, clone RP23-460F15, complete sequence
          Length = 175306

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    acatatccttgggctgtatg 392
              ||||||||||||||||||||
Sbjct: 126435 acatatccttgggctgtatg 126454

>ref|XM_593902.2| PREDICTED: Bos taurus similar to Microcephalin (LOC515815), partial
           mRNA
          Length = 2228

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 49  acaccagaaaaggataaaagaccgcaaa 76
           ||||||||||| |||||||||| |||||
Sbjct: 633 acaccagaaaacgataaaagactgcaaa 660

>gb|AC111111.11| Mus musculus chromosome 3, clone RP23-201A9, complete sequence
          Length = 233326

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 373   acatatccttgggctgtatg 392
             ||||||||||||||||||||
Sbjct: 50253 acatatccttgggctgtatg 50272

>gb|AC152421.8| Medicago truncatula clone mth2-7h20, complete sequence
          Length = 127540

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 236   aatctactcttaatcaaaaatttg 259
             |||||||| |||||||||||||||
Sbjct: 61067 aatctacttttaatcaaaaatttg 61090



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 236   aatctactcttaatcaaaaatttg 259
             |||||||| |||||||||||||||
Sbjct: 57249 aatctacttttaatcaaaaatttg 57272

>emb|AL354701.7| Human DNA sequence from clone RP11-785H23 on chromosome 9 Contains the
             3' end of a novel gene, and a novel pseudogene, complete
             sequence
          Length = 131366

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atgaatttaagtaaattcag 20
             ||||||||||||||||||||
Sbjct: 66926 atgaatttaagtaaattcag 66945

>emb|AL161442.22| Human DNA sequence from clone RP6-102F8 on chromosome Xq25-26.3
             Contains the 5' end of variants of the MBNL3 gene for
             muscleblind-like 3 (Drosophila) and a CpG island, complete
             sequence
          Length = 112453

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 28    tctgtttccctgtaaacatgtaca 51
             |||||||| |||||||||||||||
Sbjct: 34526 tctgtttcactgtaaacatgtaca 34503

>ref|XM_779694.1| PREDICTED: Strongylocentrotus purpuratus similar to G
           protein-coupled receptor 54 (LOC579587), mRNA
          Length = 1086

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 396 ttcttgaaatgttccgtcaagcttgtcg 423
           ||||||||||||||| | ||||||||||
Sbjct: 989 ttcttgaaatgttccttgaagcttgtcg 962

>gb|AC166741.1| Brassica rapa subsp. pekinensis clone KBrH080C09, complete sequence
          Length = 132099

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    gtgccatctcttctatgcaa 145
              ||||||||||||||||||||
Sbjct: 104037 gtgccatctcttctatgcaa 104056

>gb|AC091154.3| Homo sapiens chromosome 17, clone RP11-750B16, complete sequence
          Length = 175783

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      tgaatttaagtaaattcaga 21
              ||||||||||||||||||||
Sbjct: 160260 tgaatttaagtaaattcaga 160241

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 311     cgccgcgccgcctgcgcccc 330
               ||||||||||||||||||||
Sbjct: 2248812 cgccgcgccgcctgcgcccc 2248831

>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome
          Length = 4202352

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 235     gaatctactcttaatcaaaaattt 258
               |||||||||||| |||||||||||
Sbjct: 3946264 gaatctactctttatcaaaaattt 3946241

>emb|AL672031.10| Mouse DNA sequence from clone RP23-433D6 on chromosome X, complete
             sequence
          Length = 183828

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 352   tgagcaagttcttgaacacc 371
             ||||||||||||||||||||
Sbjct: 58846 tgagcaagttcttgaacacc 58865

>gb|AY109994.1| Zea mays CL768_1 mRNA sequence
          Length = 1906

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 434  gccaccattctgttgtatgt 453
            ||||||||||||||||||||
Sbjct: 1550 gccaccattctgttgtatgt 1569

>emb|AL139022.4|CNS01DX4 Human chromosome 14 DNA sequence BAC R-840I19 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 190517

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   ttccatctctgcatcaacat 208
             ||||||||||||||||||||
Sbjct: 32107 ttccatctctgcatcaacat 32088

>gb|AC131231.10| Mus musculus chromosome 19, clone RP24-395L19, complete sequence
          Length = 181700

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   tgatctttttatgcaagaat 238
             ||||||||||||||||||||
Sbjct: 48251 tgatctttttatgcaagaat 48270

>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 308     ccacgccgcgccgcctgcgc 327
               ||||||||||||||||||||
Sbjct: 1282899 ccacgccgcgccgcctgcgc 1282880

>gb|AC004606.1|AC004606 Homo sapiens chromosome 17, clone hRPC.1043_H_15, complete sequence
          Length = 99512

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     tgaatttaagtaaattcaga 21
             ||||||||||||||||||||
Sbjct: 73870 tgaatttaagtaaattcaga 73889


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,842,115
Number of Sequences: 3902068
Number of extensions: 4842115
Number of successful extensions: 103656
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103401
Number of HSP's gapped (non-prelim): 255
length of query: 477
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 455
effective length of database: 17,147,199,772
effective search space: 7801975896260
effective search space used: 7801975896260
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)