ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet09g01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1THN3_HORVU (P08772) Leaf-specific thionin DB4 precursor [Contain... 141 5e-34
2THN6_HORVU (P09618) Leaf-specific thionin BTH6 precursor [Contai... 139 3e-33
3THN7_HORVU (Q42838) Thionin BTH7 precursor [Contains: Thionin BT... 131 7e-31
4THN5_HORVU (P09617) Leaf-specific thionin precursor [Contains: L... 129 2e-30
5THNX_HORVU (Q8H0Q5) Probable leaf thionin precursor [Contains: P... 129 3e-30
6THN2_WHEAT (P32032) Alpha-2-purothionin precursor [Contains: Alp... 62 7e-10
7THN1_WHEAT (P01544) Alpha-1-purothionin precursor (Purothionin A... 62 7e-10
8THNB_WHEAT (P01543) Purothionin A-1 precursor (Purothionin A-I) ... 61 1e-09
9THNA_HORVU (P01545) Alpha-hordothionin precursor (Purothionin II... 60 2e-09
10THNB_HORVU (P21742) Beta-hordothionin precursor [Contains: Beta-... 59 4e-09
11THN5_WHEAT (Q05806) Type-5 thionin precursor [Contains: Type-5 t... 50 2e-06
12THN_BRARP (Q9SBK8) Thionin precursor [Contains: Thionin; Acidic ... 39 0.005
13THN22_ARATH (Q42597) Thionin-2.2 precursor [Contains: Thionin-2.... 34 0.12
14THN24_ARATH (Q9C8D6) Probable thionin-2.4 precursor [Contains: P... 34 0.15
15ROBO2_MOUSE (Q7TPD3) Roundabout homolog 2 precursor 33 0.34
16THN21_ARATH (Q42596) Thionin-2.1 precursor [Contains: Thionin-2.... 32 0.58
17ROBO2_HUMAN (Q9HCK4) Roundabout homolog 2 precursor 31 0.99
18THN23_ARATH (Q8VZK8) Probable thionin-2.3 precursor [Contains: P... 30 1.7
19THNB_VISAL (P08943) Viscotoxin B precursor [Contains: Viscotoxin... 30 2.9
20WFDC3_HUMAN (Q8IUB2) WAP four-disulfide core domain protein 3 pr... 28 6.4
21PCSK5_RAT (P41413) Proprotein convertase subtilisin/kexin type 5... 28 8.3

>THN3_HORVU (P08772) Leaf-specific thionin DB4 precursor [Contains:|
           Leaf-specific thionin DB4; Acidic protein]
          Length = 137

 Score =  141 bits (356), Expect = 5e-34
 Identities = 64/66 (96%), Positives = 66/66 (100%)
 Frame = -3

Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCNDGAV 232
           YPKLNLLPESGEPDVTQYCTIGCRNSVCDN+DNVFRGQ+MKFDMGLCSNACARFCNDGAV
Sbjct: 72  YPKLNLLPESGEPDVTQYCTIGCRNSVCDNMDNVFRGQEMKFDMGLCSNACARFCNDGAV 131

Query: 231 IQSVEA 214
           IQSVEA
Sbjct: 132 IQSVEA 137



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>THN6_HORVU (P09618) Leaf-specific thionin BTH6 precursor [Contains:|
           Leaf-specific thionin BTH6; Acidic protein]
          Length = 137

 Score =  139 bits (350), Expect = 3e-33
 Identities = 63/66 (95%), Positives = 65/66 (98%)
 Frame = -3

Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCNDGAV 232
           YPKLNLLPESGEPDVTQYCTIGC NSVCDN+DNVFRGQ+MKFDMGLCSNACARFCNDGAV
Sbjct: 72  YPKLNLLPESGEPDVTQYCTIGCTNSVCDNMDNVFRGQEMKFDMGLCSNACARFCNDGAV 131

Query: 231 IQSVEA 214
           IQSVEA
Sbjct: 132 IQSVEA 137



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>THN7_HORVU (Q42838) Thionin BTH7 precursor [Contains: Thionin BTH7; Acidic|
           protein]
          Length = 137

 Score =  131 bits (329), Expect = 7e-31
 Identities = 59/66 (89%), Positives = 63/66 (95%)
 Frame = -3

Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCNDGAV 232
           YPKLNLLPESGEP+VT+YCTIGCR SVCDN+DNV RGQ+MKFDMGLCSNACARFCNDG V
Sbjct: 72  YPKLNLLPESGEPNVTEYCTIGCRTSVCDNMDNVSRGQEMKFDMGLCSNACARFCNDGEV 131

Query: 231 IQSVEA 214
           IQSVEA
Sbjct: 132 IQSVEA 137



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>THN5_HORVU (P09617) Leaf-specific thionin precursor [Contains: Leaf-specific|
           thionin; Acidic protein]
          Length = 137

 Score =  129 bits (325), Expect = 2e-30
 Identities = 58/66 (87%), Positives = 62/66 (93%)
 Frame = -3

Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCNDGAV 232
           YPKLNLLPESGEP+ T+YCTIGCR SVCDN+DNV RGQ+MKFDMGLCSNACARFCNDG V
Sbjct: 72  YPKLNLLPESGEPNATEYCTIGCRTSVCDNMDNVSRGQEMKFDMGLCSNACARFCNDGEV 131

Query: 231 IQSVEA 214
           IQSVEA
Sbjct: 132 IQSVEA 137



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>THNX_HORVU (Q8H0Q5) Probable leaf thionin precursor [Contains: Probable leaf|
           thionin; Acidic protein]
          Length = 137

 Score =  129 bits (324), Expect = 3e-30
 Identities = 58/66 (87%), Positives = 62/66 (93%)
 Frame = -3

Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCNDGAV 232
           YPKLNLLPESGEP+ T+YCTIGCR SVCDN+DNV RGQ+MKFDMGLCSNACARFCNDG V
Sbjct: 72  YPKLNLLPESGEPNATEYCTIGCRTSVCDNMDNVSRGQEMKFDMGLCSNACARFCNDGDV 131

Query: 231 IQSVEA 214
           IQSVEA
Sbjct: 132 IQSVEA 137



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>THN2_WHEAT (P32032) Alpha-2-purothionin precursor [Contains:|
           Alpha-2-purothionin; Acidic protein]
          Length = 136

 Score = 61.6 bits (148), Expect = 7e-10
 Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = -3

Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFR-GQKMKFDMGLCSNACARFCNDGA 235
           +PKL L   S EPD  +YC +GCR+SVCD + N     ++MK  +  C +AC  FCN  A
Sbjct: 70  FPKLALESNSDEPDTIEYCNLGCRSSVCDYMVNAAADDEEMKLYVENCGDACVNFCNGDA 129

Query: 234 VIQSVEA 214
            + S++A
Sbjct: 130 GLTSLDA 136



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>THN1_WHEAT (P01544) Alpha-1-purothionin precursor (Purothionin A-II)|
           [Contains: Alpha-1-purothionin; Acidic protein]
           (Fragment)
          Length = 126

 Score = 61.6 bits (148), Expect = 7e-10
 Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = -3

Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFR-GQKMKFDMGLCSNACARFCNDGA 235
           +PKL L   S EPD  +YC +GCR+SVCD + N     ++MK  +  C++AC  FCN  A
Sbjct: 59  FPKLALESNSDEPDTIEYCNLGCRSSVCDYMVNAAADDEEMKLYVENCADACVSFCNGDA 118

Query: 234 VIQSVEA 214
            + S++A
Sbjct: 119 GLPSLDA 125



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>THNB_WHEAT (P01543) Purothionin A-1 precursor (Purothionin A-I)|
           (Beta-purothionin) [Contains: Purothionin A-1; Acidic
           protein]
          Length = 136

 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = -3

Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFR-GQKMKFDMGLCSNACARFCNDGA 235
           +PKL L   S EPD  +YC +GCR+S+CD + N     ++MK  +  C +AC  FCN  A
Sbjct: 70  FPKLVLESNSDEPDTMEYCNLGCRSSLCDYIVNAAADDEEMKLYVEQCGDACVNFCNADA 129

Query: 234 VIQSVEA 214
            + S++A
Sbjct: 130 GLTSLDA 136



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>THNA_HORVU (P01545) Alpha-hordothionin precursor (Purothionin II) [Contains:|
           Alpha-hordothionin; Acidic protein]
          Length = 127

 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = -3

Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFR-GQKMKFDMGLCSNACARFCNDGA 235
           +PKL L+  S EPD  +YC +GCR S+CD + N     ++MK  +  C +AC  FCN  A
Sbjct: 61  FPKLALVSNSDEPDTVKYCNLGCRASMCDYMVNAAADDEEMKLYLENCGDACVNFCNGDA 120

Query: 234 VIQSVEA 214
            + S+ A
Sbjct: 121 GLTSLTA 127



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>THNB_HORVU (P21742) Beta-hordothionin precursor [Contains: Beta-hordothionin;|
           Acidic protein]
          Length = 136

 Score = 58.9 bits (141), Expect = 4e-09
 Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
 Frame = -3

Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFR-GQKMKFDMGLCSNACARFCNDGA 235
           +PKL L+  S EPD   YC +GCR S+CD + N     ++MK  +  CS+AC  FCN   
Sbjct: 70  FPKLALVSNSDEPDTIDYCNLGCRASMCDYMVNAAADDEEMKLYVEHCSDACVNFCNGDV 129

Query: 234 VIQSVEA 214
            + S+ A
Sbjct: 130 GLTSLTA 136



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>THN5_WHEAT (Q05806) Type-5 thionin precursor [Contains: Type-5 thionin (Type V|
           thionin); Acidic protein]
          Length = 131

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
 Frame = -3

Query: 384 SGEPDVTQYCTIGCRNSVCDNVDNVFRG--QKMKFDMGLCSNACARFCNDGAVIQSVE 217
           S EP+  +YC++GCR+SVCDN+ N      ++MK  +  C  AC  FC    ++ S++
Sbjct: 73  SDEPNAIEYCSLGCRSSVCDNMINTADNSTEEMKLYVKRCGVACDSFCKGDTLLASLD 130



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>THN_BRARP (Q9SBK8) Thionin precursor [Contains: Thionin; Acidic protein]|
          Length = 133

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = -3

Query: 369 VTQYCTIGCRNSVCDNVDNVFRGQKMKFD--MGLCSNACARFCNDGA 235
           V +YC +GC +SVC  +  +    ++  +  +  C+NAC+ FC  G+
Sbjct: 80  VNEYCKLGCASSVCGALTTLKNSMQVNCEGAVSQCTNACSNFCTKGS 126



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>THN22_ARATH (Q42597) Thionin-2.2 precursor [Contains: Thionin-2.2; Acidic|
           protein]
          Length = 134

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = -3

Query: 399 NLLPESGEPDVTQYCTIGCRNSVC---DNVDNVFRGQKMKFDMGLCSNACARFCNDGA 235
           ++L  SG+  V +YC +GC +SVC     + N    + +   +  C+ AC+  C  G+
Sbjct: 71  DILENSGDA-VNEYCKLGCASSVCGALTTLQNFDTSKVLSEAVEQCTKACSSVCTGGS 127



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>THN24_ARATH (Q9C8D6) Probable thionin-2.4 precursor [Contains: Probable|
           thionin-2.4; Acidic protein]
          Length = 134

 Score = 33.9 bits (76), Expect = 0.15
 Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
 Frame = -3

Query: 399 NLLPESGEPDVTQYCTIGCRNSVCDN---VDNVFRGQKMKFDMGLCSNACARFCNDGAV 232
           ++L  +G+  VT+YC +GC +SVC     + N    + +  ++  C+ AC+  C  G++
Sbjct: 71  DILENTGDA-VTEYCKLGCVSSVCGALTILQNSDASEIVNGEVEKCTMACSTVCTKGSM 128



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>ROBO2_MOUSE (Q7TPD3) Roundabout homolog 2 precursor|
          Length = 1470

 Score = 32.7 bits (73), Expect = 0.34
 Identities = 16/63 (25%), Positives = 35/63 (55%)
 Frame = -1

Query: 377 NQMSLSTAPLDAGILSVTTWTMFSVAKR*NSTWDSAATHVPVSVMMVQSFSLLKPNHAFL 198
           N ++LS  P   G+L  + + + + ++  +++W + A HV  ++  V+    L+PN  +L
Sbjct: 540 NSVTLSWQPGTPGVLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRG---LRPNTIYL 596

Query: 197 CMI 189
            M+
Sbjct: 597 FMV 599



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>THN21_ARATH (Q42596) Thionin-2.1 precursor [Contains: Thionin-2.1; Acidic|
           protein]
          Length = 134

 Score = 32.0 bits (71), Expect = 0.58
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = -3

Query: 402 LNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFRGQKMKFDMGL---CSNACARFCNDGAV 232
           +N + E+      ++C +GC  SVC  ++ +      +   G    C+  C+ FC    V
Sbjct: 66  VNAILENSADATNEHCKLGCETSVCGAMNTLQNSDASEIVNGASEQCAKGCSIFCTKSYV 125

Query: 231 I 229
           +
Sbjct: 126 V 126



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>ROBO2_HUMAN (Q9HCK4) Roundabout homolog 2 precursor|
          Length = 1378

 Score = 31.2 bits (69), Expect = 0.99
 Identities = 16/63 (25%), Positives = 34/63 (53%)
 Frame = -1

Query: 377 NQMSLSTAPLDAGILSVTTWTMFSVAKR*NSTWDSAATHVPVSVMMVQSFSLLKPNHAFL 198
           N ++LS  P   G L  + + + + ++  +++W + A HV  ++  V+    L+PN  +L
Sbjct: 536 NSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRG---LRPNTIYL 592

Query: 197 CMI 189
            M+
Sbjct: 593 FMV 595



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>THN23_ARATH (Q8VZK8) Probable thionin-2.3 precursor [Contains: Probable|
           thionin-2.3; Acidic protein]
          Length = 135

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = -3

Query: 393 LPESGEPDVTQYCTIGCRNSVC---DNVDNVFRGQKMKFDMGLCSNACARFCNDGA 235
           L  SG+  V  YC +GC +S+C    ++  +    K+   +  C+ AC+  C  G+
Sbjct: 74  LTNSGDV-VNVYCKLGCVSSLCGALTSLQKLDTSGKVNVAVERCTKACSTICTKGS 128



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>THNB_VISAL (P08943) Viscotoxin B precursor [Contains: Viscotoxin B; Acidic|
           protein] (Fragment)
          Length = 103

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -3

Query: 360 YCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCNDG 238
           YCT+GC++S C ++       ++  +   C  AC+  C+ G
Sbjct: 54  YCTLGCQSSKCASITTP-PNSEVDAEAVRCKAACSNLCDFG 93



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>WFDC3_HUMAN (Q8IUB2) WAP four-disulfide core domain protein 3 precursor|
           (Putative protease inhibitor WAP14)
          Length = 231

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 267 CCRVPCRISSFGHGKHCPRCHRQNSCIQWCSTE 365
           C R+ CR    G  + CPR  R+ SC++ C T+
Sbjct: 61  CGRI-CRDIPKGRKRDCPRVIRKQSCLKRCITD 92



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>PCSK5_RAT (P41413) Proprotein convertase subtilisin/kexin type 5 precursor|
           (EC 3.4.21.-) (Proprotein convertase PC5)
           (Subtilisin/kexin-like protease PC5) (rPC5) (PC6)
           (Fragment)
          Length = 1877

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 16/64 (25%), Positives = 21/64 (32%), Gaps = 23/64 (35%)
 Frame = +3

Query: 270 CRVPCRISSFGHGKHCPRCHR-----------------------QNSCIQWCSTE*HLVH 380
           C V C    F  G  C  CHR                       +  C+Q CS   +L H
Sbjct: 769 CSVTCEDGQFFSGHDCQPCHRFCATCAGAGADGCINCTEGYVMEEGRCVQSCSVSYYLDH 828

Query: 381 RIQG 392
            ++G
Sbjct: 829 SLEG 832


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,403,855
Number of Sequences: 219361
Number of extensions: 1240337
Number of successful extensions: 3117
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3107
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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