| Clone Name | rbaet09g01 |
|---|---|
| Clone Library Name | barley_pub |
>THN3_HORVU (P08772) Leaf-specific thionin DB4 precursor [Contains:| Leaf-specific thionin DB4; Acidic protein] Length = 137 Score = 141 bits (356), Expect = 5e-34 Identities = 64/66 (96%), Positives = 66/66 (100%) Frame = -3 Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCNDGAV 232 YPKLNLLPESGEPDVTQYCTIGCRNSVCDN+DNVFRGQ+MKFDMGLCSNACARFCNDGAV Sbjct: 72 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNMDNVFRGQEMKFDMGLCSNACARFCNDGAV 131 Query: 231 IQSVEA 214 IQSVEA Sbjct: 132 IQSVEA 137
>THN6_HORVU (P09618) Leaf-specific thionin BTH6 precursor [Contains:| Leaf-specific thionin BTH6; Acidic protein] Length = 137 Score = 139 bits (350), Expect = 3e-33 Identities = 63/66 (95%), Positives = 65/66 (98%) Frame = -3 Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCNDGAV 232 YPKLNLLPESGEPDVTQYCTIGC NSVCDN+DNVFRGQ+MKFDMGLCSNACARFCNDGAV Sbjct: 72 YPKLNLLPESGEPDVTQYCTIGCTNSVCDNMDNVFRGQEMKFDMGLCSNACARFCNDGAV 131 Query: 231 IQSVEA 214 IQSVEA Sbjct: 132 IQSVEA 137
>THN7_HORVU (Q42838) Thionin BTH7 precursor [Contains: Thionin BTH7; Acidic| protein] Length = 137 Score = 131 bits (329), Expect = 7e-31 Identities = 59/66 (89%), Positives = 63/66 (95%) Frame = -3 Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCNDGAV 232 YPKLNLLPESGEP+VT+YCTIGCR SVCDN+DNV RGQ+MKFDMGLCSNACARFCNDG V Sbjct: 72 YPKLNLLPESGEPNVTEYCTIGCRTSVCDNMDNVSRGQEMKFDMGLCSNACARFCNDGEV 131 Query: 231 IQSVEA 214 IQSVEA Sbjct: 132 IQSVEA 137
>THN5_HORVU (P09617) Leaf-specific thionin precursor [Contains: Leaf-specific| thionin; Acidic protein] Length = 137 Score = 129 bits (325), Expect = 2e-30 Identities = 58/66 (87%), Positives = 62/66 (93%) Frame = -3 Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCNDGAV 232 YPKLNLLPESGEP+ T+YCTIGCR SVCDN+DNV RGQ+MKFDMGLCSNACARFCNDG V Sbjct: 72 YPKLNLLPESGEPNATEYCTIGCRTSVCDNMDNVSRGQEMKFDMGLCSNACARFCNDGEV 131 Query: 231 IQSVEA 214 IQSVEA Sbjct: 132 IQSVEA 137
>THNX_HORVU (Q8H0Q5) Probable leaf thionin precursor [Contains: Probable leaf| thionin; Acidic protein] Length = 137 Score = 129 bits (324), Expect = 3e-30 Identities = 58/66 (87%), Positives = 62/66 (93%) Frame = -3 Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCNDGAV 232 YPKLNLLPESGEP+ T+YCTIGCR SVCDN+DNV RGQ+MKFDMGLCSNACARFCNDG V Sbjct: 72 YPKLNLLPESGEPNATEYCTIGCRTSVCDNMDNVSRGQEMKFDMGLCSNACARFCNDGDV 131 Query: 231 IQSVEA 214 IQSVEA Sbjct: 132 IQSVEA 137
>THN2_WHEAT (P32032) Alpha-2-purothionin precursor [Contains:| Alpha-2-purothionin; Acidic protein] Length = 136 Score = 61.6 bits (148), Expect = 7e-10 Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Frame = -3 Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFR-GQKMKFDMGLCSNACARFCNDGA 235 +PKL L S EPD +YC +GCR+SVCD + N ++MK + C +AC FCN A Sbjct: 70 FPKLALESNSDEPDTIEYCNLGCRSSVCDYMVNAAADDEEMKLYVENCGDACVNFCNGDA 129 Query: 234 VIQSVEA 214 + S++A Sbjct: 130 GLTSLDA 136
>THN1_WHEAT (P01544) Alpha-1-purothionin precursor (Purothionin A-II)| [Contains: Alpha-1-purothionin; Acidic protein] (Fragment) Length = 126 Score = 61.6 bits (148), Expect = 7e-10 Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Frame = -3 Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFR-GQKMKFDMGLCSNACARFCNDGA 235 +PKL L S EPD +YC +GCR+SVCD + N ++MK + C++AC FCN A Sbjct: 59 FPKLALESNSDEPDTIEYCNLGCRSSVCDYMVNAAADDEEMKLYVENCADACVSFCNGDA 118 Query: 234 VIQSVEA 214 + S++A Sbjct: 119 GLPSLDA 125
>THNB_WHEAT (P01543) Purothionin A-1 precursor (Purothionin A-I)| (Beta-purothionin) [Contains: Purothionin A-1; Acidic protein] Length = 136 Score = 60.8 bits (146), Expect = 1e-09 Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Frame = -3 Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFR-GQKMKFDMGLCSNACARFCNDGA 235 +PKL L S EPD +YC +GCR+S+CD + N ++MK + C +AC FCN A Sbjct: 70 FPKLVLESNSDEPDTMEYCNLGCRSSLCDYIVNAAADDEEMKLYVEQCGDACVNFCNADA 129 Query: 234 VIQSVEA 214 + S++A Sbjct: 130 GLTSLDA 136
>THNA_HORVU (P01545) Alpha-hordothionin precursor (Purothionin II) [Contains:| Alpha-hordothionin; Acidic protein] Length = 127 Score = 60.1 bits (144), Expect = 2e-09 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%) Frame = -3 Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFR-GQKMKFDMGLCSNACARFCNDGA 235 +PKL L+ S EPD +YC +GCR S+CD + N ++MK + C +AC FCN A Sbjct: 61 FPKLALVSNSDEPDTVKYCNLGCRASMCDYMVNAAADDEEMKLYLENCGDACVNFCNGDA 120 Query: 234 VIQSVEA 214 + S+ A Sbjct: 121 GLTSLTA 127
>THNB_HORVU (P21742) Beta-hordothionin precursor [Contains: Beta-hordothionin;| Acidic protein] Length = 136 Score = 58.9 bits (141), Expect = 4e-09 Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Frame = -3 Query: 411 YPKLNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFR-GQKMKFDMGLCSNACARFCNDGA 235 +PKL L+ S EPD YC +GCR S+CD + N ++MK + CS+AC FCN Sbjct: 70 FPKLALVSNSDEPDTIDYCNLGCRASMCDYMVNAAADDEEMKLYVEHCSDACVNFCNGDV 129 Query: 234 VIQSVEA 214 + S+ A Sbjct: 130 GLTSLTA 136
>THN5_WHEAT (Q05806) Type-5 thionin precursor [Contains: Type-5 thionin (Type V| thionin); Acidic protein] Length = 131 Score = 50.1 bits (118), Expect = 2e-06 Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Frame = -3 Query: 384 SGEPDVTQYCTIGCRNSVCDNVDNVFRG--QKMKFDMGLCSNACARFCNDGAVIQSVE 217 S EP+ +YC++GCR+SVCDN+ N ++MK + C AC FC ++ S++ Sbjct: 73 SDEPNAIEYCSLGCRSSVCDNMINTADNSTEEMKLYVKRCGVACDSFCKGDTLLASLD 130
>THN_BRARP (Q9SBK8) Thionin precursor [Contains: Thionin; Acidic protein]| Length = 133 Score = 38.9 bits (89), Expect = 0.005 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = -3 Query: 369 VTQYCTIGCRNSVCDNVDNVFRGQKMKFD--MGLCSNACARFCNDGA 235 V +YC +GC +SVC + + ++ + + C+NAC+ FC G+ Sbjct: 80 VNEYCKLGCASSVCGALTTLKNSMQVNCEGAVSQCTNACSNFCTKGS 126
>THN22_ARATH (Q42597) Thionin-2.2 precursor [Contains: Thionin-2.2; Acidic| protein] Length = 134 Score = 34.3 bits (77), Expect = 0.12 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Frame = -3 Query: 399 NLLPESGEPDVTQYCTIGCRNSVC---DNVDNVFRGQKMKFDMGLCSNACARFCNDGA 235 ++L SG+ V +YC +GC +SVC + N + + + C+ AC+ C G+ Sbjct: 71 DILENSGDA-VNEYCKLGCASSVCGALTTLQNFDTSKVLSEAVEQCTKACSSVCTGGS 127
>THN24_ARATH (Q9C8D6) Probable thionin-2.4 precursor [Contains: Probable| thionin-2.4; Acidic protein] Length = 134 Score = 33.9 bits (76), Expect = 0.15 Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 3/59 (5%) Frame = -3 Query: 399 NLLPESGEPDVTQYCTIGCRNSVCDN---VDNVFRGQKMKFDMGLCSNACARFCNDGAV 232 ++L +G+ VT+YC +GC +SVC + N + + ++ C+ AC+ C G++ Sbjct: 71 DILENTGDA-VTEYCKLGCVSSVCGALTILQNSDASEIVNGEVEKCTMACSTVCTKGSM 128
>ROBO2_MOUSE (Q7TPD3) Roundabout homolog 2 precursor| Length = 1470 Score = 32.7 bits (73), Expect = 0.34 Identities = 16/63 (25%), Positives = 35/63 (55%) Frame = -1 Query: 377 NQMSLSTAPLDAGILSVTTWTMFSVAKR*NSTWDSAATHVPVSVMMVQSFSLLKPNHAFL 198 N ++LS P G+L + + + + ++ +++W + A HV ++ V+ L+PN +L Sbjct: 540 NSVTLSWQPGTPGVLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRG---LRPNTIYL 596 Query: 197 CMI 189 M+ Sbjct: 597 FMV 599
>THN21_ARATH (Q42596) Thionin-2.1 precursor [Contains: Thionin-2.1; Acidic| protein] Length = 134 Score = 32.0 bits (71), Expect = 0.58 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Frame = -3 Query: 402 LNLLPESGEPDVTQYCTIGCRNSVCDNVDNVFRGQKMKFDMGL---CSNACARFCNDGAV 232 +N + E+ ++C +GC SVC ++ + + G C+ C+ FC V Sbjct: 66 VNAILENSADATNEHCKLGCETSVCGAMNTLQNSDASEIVNGASEQCAKGCSIFCTKSYV 125 Query: 231 I 229 + Sbjct: 126 V 126
>ROBO2_HUMAN (Q9HCK4) Roundabout homolog 2 precursor| Length = 1378 Score = 31.2 bits (69), Expect = 0.99 Identities = 16/63 (25%), Positives = 34/63 (53%) Frame = -1 Query: 377 NQMSLSTAPLDAGILSVTTWTMFSVAKR*NSTWDSAATHVPVSVMMVQSFSLLKPNHAFL 198 N ++LS P G L + + + + ++ +++W + A HV ++ V+ L+PN +L Sbjct: 536 NSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRG---LRPNTIYL 592 Query: 197 CMI 189 M+ Sbjct: 593 FMV 595
>THN23_ARATH (Q8VZK8) Probable thionin-2.3 precursor [Contains: Probable| thionin-2.3; Acidic protein] Length = 135 Score = 30.4 bits (67), Expect = 1.7 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = -3 Query: 393 LPESGEPDVTQYCTIGCRNSVC---DNVDNVFRGQKMKFDMGLCSNACARFCNDGA 235 L SG+ V YC +GC +S+C ++ + K+ + C+ AC+ C G+ Sbjct: 74 LTNSGDV-VNVYCKLGCVSSLCGALTSLQKLDTSGKVNVAVERCTKACSTICTKGS 128
>THNB_VISAL (P08943) Viscotoxin B precursor [Contains: Viscotoxin B; Acidic| protein] (Fragment) Length = 103 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = -3 Query: 360 YCTIGCRNSVCDNVDNVFRGQKMKFDMGLCSNACARFCNDG 238 YCT+GC++S C ++ ++ + C AC+ C+ G Sbjct: 54 YCTLGCQSSKCASITTP-PNSEVDAEAVRCKAACSNLCDFG 93
>WFDC3_HUMAN (Q8IUB2) WAP four-disulfide core domain protein 3 precursor| (Putative protease inhibitor WAP14) Length = 231 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +3 Query: 267 CCRVPCRISSFGHGKHCPRCHRQNSCIQWCSTE 365 C R+ CR G + CPR R+ SC++ C T+ Sbjct: 61 CGRI-CRDIPKGRKRDCPRVIRKQSCLKRCITD 92
>PCSK5_RAT (P41413) Proprotein convertase subtilisin/kexin type 5 precursor| (EC 3.4.21.-) (Proprotein convertase PC5) (Subtilisin/kexin-like protease PC5) (rPC5) (PC6) (Fragment) Length = 1877 Score = 28.1 bits (61), Expect = 8.3 Identities = 16/64 (25%), Positives = 21/64 (32%), Gaps = 23/64 (35%) Frame = +3 Query: 270 CRVPCRISSFGHGKHCPRCHR-----------------------QNSCIQWCSTE*HLVH 380 C V C F G C CHR + C+Q CS +L H Sbjct: 769 CSVTCEDGQFFSGHDCQPCHRFCATCAGAGADGCINCTEGYVMEEGRCVQSCSVSYYLDH 828 Query: 381 RIQG 392 ++G Sbjct: 829 SLEG 832 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,403,855 Number of Sequences: 219361 Number of extensions: 1240337 Number of successful extensions: 3117 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 3042 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3107 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)