>YIAH_ECOLI (P37669) Inner membrane protein yiaH|
          Length = 331

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
 Frame = +2

Query: 74  IHTPTFRQTNKHCLSPVTW----------RVTAPIQLLRGRVCILNVSSLSQKKALRAGV 223
           IHT T+  TN H +SPVTW          RV+ P+  +          S   +  LR G+
Sbjct: 22  IHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMISGYLFFGERSAQPRHFLRIGL 81

>EPIPL_MOUSE (Q8R0W0) Epiplakin|
          Length = 6548

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 106  ALPVPGNVARDRTHSITSWPCLHSQCIFALSKKSPACRC 222
            A+ VP N+ R + HS++ W  LHS+ + A  ++     C
Sbjct: 1460 AMKVPINMGRFQGHSVSLWDLLHSEYVGAEKRRELVALC 1498

>EREG_MOUSE (Q61521) Epiregulin precursor|
          Length = 162

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 166 CLHSQCIFALSKKSPACRCK 225
           CLH QCI+ +  +   CRC+
Sbjct: 69  CLHGQCIYLVDMREKFCRCE 88

>IAP1_NPVOP (O10296) Apoptosis inhibitor 1 (IAP-1)|
          Length = 275

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
 Frame = +1

Query: 52  AHTSPGRNSHAHLPTNQ*ALPVPGNVARDRTHSITSWPCLH----SQCIFALSKKSPACR 219
           A T+PG  + A   +      +   V  +R       PC H     QC FAL  K P CR
Sbjct: 208 AETAPGEPAPAFAGSEA----LECKVCLERQRDAVLLPCRHFCVCMQCYFALDGKCPTCR 263

>EREG_HUMAN (O14944) Epiregulin precursor|
          Length = 169

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 166 CLHSQCIFALSKKSPACRCK 225
           CLH QCI+ +      CRC+
Sbjct: 76  CLHGQCIYLVDMSQNYCRCE 95


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,989,586
Number of Sequences: 219361
Number of extensions: 844228
Number of successful extensions: 2174
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2173
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)