>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                            
Query: 226      ttggcgaagaagcggttgaccttctcagtggggtggaacgagtcccaaaagaagtactta 285
                ||||||||||| ||||| |||||||| || || ||||| |||||||| ||||||||||| 
Sbjct: 25486841 ttggcgaagaaccggttcaccttctctgtcggatggaaggagtcccagaagaagtacttg 25486900

                         
Query: 286      tcggcgtcg 294
                |||||||||
Sbjct: 25486901 tcggcgtcg 25486909

>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0523F01
          Length = 146419

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                        
Query: 226  ttggcgaagaagcggttgaccttctcagtggggtggaacgagtcccaaaagaagtactta 285
            ||||||||||| ||||| |||||||| || || ||||| |||||||| ||||||||||| 
Sbjct: 5158 ttggcgaagaaccggttcaccttctctgtcggatggaaggagtcccagaagaagtacttg 5217

                     
Query: 286  tcggcgtcg 294
            |||||||||
Sbjct: 5218 tcggcgtcg 5226

>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0019I19
          Length = 164483

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                          
Query: 226    ttggcgaagaagcggttgaccttctcagtggggtggaacgagtcccaaaagaagtactta 285
              ||||||||||| ||||| |||||||| || || ||||| |||||||| ||||||||||| 
Sbjct: 160850 ttggcgaagaaccggttcaccttctctgtcggatggaaggagtcccagaagaagtacttg 160909

                       
Query: 286    tcggcgtcg 294
              |||||||||
Sbjct: 160910 tcggcgtcg 160918

>dbj|AK058562.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D11, full
            insert sequence
          Length = 1388

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                        
Query: 226  ttggcgaagaagcggttgaccttctcagtggggtggaacgagtcccaaaagaagtactta 285
            ||||||||||| ||||| |||||||| || || ||||| |||||||| ||||||||||| 
Sbjct: 1153 ttggcgaagaaccggttcaccttctctgtcggatggaaggagtcccagaagaagtacttg 1094

                     
Query: 286  tcggcgtcg 294
            |||||||||
Sbjct: 1093 tcggcgtcg 1085

>ref|XM_464400.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1310

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 238  cggttgaccttctcagtggggtggaacgagtcccaaaagaagtacttatcggcgtcgtcg 297
            ||||| |||||||| ||||||||||| | |||||| |||| ||||||   ||||||||||
Sbjct: 1114 cggttcaccttctccgtggggtggaaggcgtcccagaagaggtacttgctggcgtcgtcg 1055

                                         
Query: 298  caggtcagcggggacctgtcgttgcacat 326
            || ||||  || |||  ||||||||||||
Sbjct: 1054 cacgtcaatggcgactcgtcgttgcacat 1026

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                           
Query: 238     cggttgaccttctcagtggggtggaacgagtcccaaaagaagtacttatcggcgtcgtcg 297
               ||||| |||||||| ||||||||||| | |||||| |||| ||||||   ||||||||||
Sbjct: 4948187 cggttcaccttctccgtggggtggaaggcgtcccagaagaggtacttgctggcgtcgtcg 4948128

                                            
Query: 298     caggtcagcggggacctgtcgttgcacat 326
               || ||||  || |||  ||||||||||||
Sbjct: 4948127 cacgtcaatggcgactcgtcgttgcacat 4948099

>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0031B09
          Length = 132729

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                         
Query: 238   cggttgaccttctcagtggggtggaacgagtcccaaaagaagtacttatcggcgtcgtcg 297
             ||||| |||||||| ||||||||||| | |||||| |||| ||||||   ||||||||||
Sbjct: 19313 cggttcaccttctccgtggggtggaaggcgtcccagaagaggtacttgctggcgtcgtcg 19254

                                          
Query: 298   caggtcagcggggacctgtcgttgcacat 326
             || ||||  || |||  ||||||||||||
Sbjct: 19253 cacgtcaatggcgactcgtcgttgcacat 19225

>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1145_F01
          Length = 113755

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                         
Query: 238   cggttgaccttctcagtggggtggaacgagtcccaaaagaagtacttatcggcgtcgtcg 297
             ||||| |||||||| ||||||||||| | |||||| |||| ||||||   ||||||||||
Sbjct: 92926 cggttcaccttctccgtggggtggaaggcgtcccagaagaggtacttgctggcgtcgtcg 92867

                                          
Query: 298   caggtcagcggggacctgtcgttgcacat 326
             || ||||  || |||  ||||||||||||
Sbjct: 92866 cacgtcaatggcgactcgtcgttgcacat 92838

>dbj|AK060691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-C02, full
            insert sequence
          Length = 1310

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 238  cggttgaccttctcagtggggtggaacgagtcccaaaagaagtacttatcggcgtcgtcg 297
            ||||| |||||||| ||||||||||| | |||||| |||| ||||||   ||||||||||
Sbjct: 1114 cggttcaccttctccgtggggtggaaggcgtcccagaagaggtacttgctggcgtcgtcg 1055

                                         
Query: 298  caggtcagcggggacctgtcgttgcacat 326
            || ||||  || |||  ||||||||||||
Sbjct: 1054 cacgtcaatggcgactcgtcgttgcacat 1026

>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0092E21, complete sequence
          Length = 132649

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    aatacatgctagtactatgt 112
             ||||||||||||||||||||
Sbjct: 81563 aatacatgctagtactatgt 81544



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    aatacatgctagtactatgt 112
             ||||||||||||||||||||
Sbjct: 81505 aatacatgctagtactatgt 81486

>emb|AL138707.10| Human DNA sequence from clone RP11-430M15 on chromosome 13 Contains the
             3' end of a novel gene (FLJ22153) and the 3' end of the
             gene for a novel protein (ortholog of rat putative four
             repeat ion channel), complete sequence
          Length = 181311

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    atgctagtactatgtatcta 117
             ||||||||||||||||||||
Sbjct: 31783 atgctagtactatgtatcta 31802

>emb|AL049738.4|HSJ944N18 Human DNA sequence from clone RP5-944N18 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 122383

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    tttcttacttgttacccaaa 55
             ||||||||||||||||||||
Sbjct: 16183 tttcttacttgttacccaaa 16202

>gb|AC093416.2| Homo sapiens chromosome 3 clone RP11-659P16, complete sequence
          Length = 189308

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     ttaatctttcttacttgtta 49
              ||||||||||||||||||||
Sbjct: 129555 ttaatctttcttacttgtta 129574

>gb|AF333761.1|AF333761 Rhodococcus ruber putative two-component system regulatory protein,
            partial cds; putative integral membrane protein and
            putative sodium:solute symporter, EthR (ethR), EthA
            (ethA), EthB (ethB), EthC (ethC), EthD (ethD), complete
            cds; class II transposon insertion sequence IS3
            transposase (tnpX) and transposase TnpA (tnpA) genes,
            complete cds; putative membrane protein gene, partial
            cds; and unknown genes
          Length = 23656

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 201  gctcaagctcaccgccgtcg 220
            ||||||||||||||||||||
Sbjct: 2010 gctcaagctcaccgccgtcg 2029

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 93       aatacatgctagtactatgt 112
                ||||||||||||||||||||
Sbjct: 20538084 aatacatgctagtactatgt 20538065



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 93       aatacatgctagtactatgt 112
                ||||||||||||||||||||
Sbjct: 20538026 aatacatgctagtactatgt 20538007

>gb|AF087149.1|HSTOP2B07 Homo sapiens DNA topoisomerase II beta (TOP2B) gene, exons 11 through
            15
          Length = 2910

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 30   ttaatctttcttacttgtta 49
            ||||||||||||||||||||
Sbjct: 1878 ttaatctttcttacttgtta 1859


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,115,861
Number of Sequences: 3902068
Number of extensions: 2115861
Number of successful extensions: 35412
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35338
Number of HSP's gapped (non-prelim): 74
length of query: 326
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 304
effective length of database: 17,147,199,772
effective search space: 5212748730688
effective search space used: 5212748730688
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)