ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet08h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ALG10_CANAL (Q59YV2) Alpha-1,2 glucosyltransferase ALG10 (EC 2.4... 30 1.9
2PDYN_PIG (P01214) Beta-neoendorphin-dynorphin precursor (Proenke... 27 9.5

>ALG10_CANAL (Q59YV2) Alpha-1,2 glucosyltransferase ALG10 (EC 2.4.1.-)|
           (Alpha-2-glucosyltransferase ALG10)
           (Dolichyl-phosphoglucose-dependent glucosyltransferase
           ALG10) (Asparagine-linked glycosylation protein 10)
          Length = 450

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -1

Query: 125 DSHRWSFHFVLLLYCVTNQAWSWFP*WLHGNNIKIFF 15
           D+H+   H V + YC T   +   P WL+ + IK ++
Sbjct: 269 DNHQIELHIVQVFYCFTFITFFTIPNWLNKSTIKKYY 305



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>PDYN_PIG (P01214) Beta-neoendorphin-dynorphin precursor (Proenkephalin B)|
           (Preprodynorphin) [Contains: Beta-neoendorphin;
           Dynorphin; Leu-enkephalin; Rimorphin; Leumorphin]
          Length = 256

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 186 PQVRTDACSGCNICSLKSRVGFTPV 112
           P    D  SGC++C++K++ G  P+
Sbjct: 16  PSTMADCLSGCSLCAVKTQDGPKPI 40


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,958,869
Number of Sequences: 219361
Number of extensions: 600553
Number of successful extensions: 1873
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1873
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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