ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet08e12 |
|---|---|
| Clone Library Name | barley_pub |
>XTH23_ARATH (Q38910) Probable xyloglucan endotransglucosylase/hydrolase protein| 23 precursor (EC 2.4.1.207) (At-XTH23) (XTH-23) Length = 286 Score = 56.2 bits (134), Expect = 2e-08 Identities = 22/27 (81%), Positives = 24/27 (88%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAEC 252 RWVQ+NYMIYNYCTD KRF QG+P EC Sbjct: 257 RWVQNNYMIYNYCTDAKRFPQGLPREC 283
>XTH22_ARATH (Q38857) Xyloglucan endotransglucosylase/hydrolase protein 22| precursor (EC 2.4.1.207) (At-XTH22) (XTH-22) (Touch protein 4) Length = 284 Score = 55.5 bits (132), Expect = 3e-08 Identities = 22/27 (81%), Positives = 23/27 (85%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAEC 252 RWVQ NYMIYNYCTD KRF QG+P EC Sbjct: 255 RWVQRNYMIYNYCTDAKRFPQGLPKEC 281
>XTH13_ARATH (Q9FKL8) Putative xyloglucan endotransglucosylase/hydrolase protein| 13 precursor (EC 2.4.1.207) (At-XTH13) (XTH-13) Length = 284 Score = 53.1 bits (126), Expect = 2e-07 Identities = 20/29 (68%), Positives = 25/29 (86%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAECSM 246 +WVQ +YMIYNYCTD KRF QG+P EC++ Sbjct: 255 KWVQDDYMIYNYCTDFKRFPQGLPTECNL 283
>XTH24_ARATH (P24806) Xyloglucan endotransglucosylase/hydrolase protein 24| precursor (EC 2.4.1.207) (At-XTH24) (XTH-24) (Meristem protein 5) (MERI-5 protein) (MERI5 protein) (Endo-xyloglucan transferase) (Xyloglucan endo-1,4-beta-D-glucanase) Length = 269 Score = 53.1 bits (126), Expect = 2e-07 Identities = 20/28 (71%), Positives = 23/28 (82%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAECS 249 +WVQ NYMIYNYCTD +RF QG P EC+ Sbjct: 239 KWVQKNYMIYNYCTDHRRFPQGAPKECT 266
>XTH12_ARATH (Q9FKL9) Probable xyloglucan endotransglucosylase/hydrolase protein| 12 precursor (EC 2.4.1.207) (At-XTH12) (XTH-12) Length = 285 Score = 53.1 bits (126), Expect = 2e-07 Identities = 20/29 (68%), Positives = 25/29 (86%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAECSM 246 +WVQ +YMIYNYCTD KRF QG+P EC++ Sbjct: 256 KWVQKDYMIYNYCTDFKRFPQGLPTECNL 284
>XTH20_ARATH (Q9FI31) Probable xyloglucan endotransglucosylase/hydrolase protein| 20 precursor (EC 2.4.1.207) (At-XTH20) (XTH-20) Length = 282 Score = 51.2 bits (121), Expect = 6e-07 Identities = 19/28 (67%), Positives = 21/28 (75%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAECS 249 +W Q YM+YNYCTD KRF QG P ECS Sbjct: 255 KWAQRKYMVYNYCTDKKRFPQGAPPECS 282
>BRU1_SOYBN (P35694) Brassinosteroid-regulated protein BRU1 precursor| Length = 283 Score = 50.8 bits (120), Expect = 8e-07 Identities = 20/27 (74%), Positives = 23/27 (85%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAEC 252 RWVQ +MIYNYC+D KRF QG+PAEC Sbjct: 255 RWVQKYFMIYNYCSDLKRFPQGLPAEC 281
>XTH14_ARATH (Q9ZSU4) Xyloglucan endotransglucosylase/hydrolase protein 14| precursor (EC 2.4.1.207) (At-XTH14) (XTH-14) Length = 287 Score = 49.7 bits (117), Expect = 2e-06 Identities = 19/28 (67%), Positives = 23/28 (82%) Frame = -3 Query: 329 WVQSNYMIYNYCTDPKRFAQGVPAECSM 246 WVQ ++MIYNYCTD KRF QG+P EC + Sbjct: 260 WVQRDFMIYNYCTDFKRFPQGLPKECKL 287
>XTH17_ARATH (O80803) Probable xyloglucan endotransglucosylase/hydrolase protein| 17 precursor (EC 2.4.1.207) (At-XTH17) (XTH-17) Length = 282 Score = 49.7 bits (117), Expect = 2e-06 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = -3 Query: 326 VQSNYMIYNYCTDPKRFAQGVPAECS 249 VQS YMIYNYCTD +RF +GVPAEC+ Sbjct: 257 VQSKYMIYNYCTDKRRFPRGVPAECT 282
>XTH21_ARATH (Q9ZV40) Probable xyloglucan endotransglucosylase/hydrolase protein| 21 precursor (EC 2.4.1.207) (At-XTH21) (XTH-21) Length = 305 Score = 48.5 bits (114), Expect = 4e-06 Identities = 17/28 (60%), Positives = 22/28 (78%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAECS 249 RWVQ +M+YNYC D KRF+ G+P EC+ Sbjct: 270 RWVQRKFMVYNYCKDKKRFSNGLPVECT 297
>XTH19_ARATH (Q9M0D1) Probable xyloglucan endotransglucosylase/hydrolase protein| 19 precursor (EC 2.4.1.207) (At-XTH19) (XTH-19) Length = 277 Score = 48.1 bits (113), Expect = 5e-06 Identities = 19/26 (73%), Positives = 22/26 (84%) Frame = -3 Query: 326 VQSNYMIYNYCTDPKRFAQGVPAECS 249 VQS YM+YNYC+D KRF +GVP ECS Sbjct: 252 VQSKYMVYNYCSDKKRFPRGVPPECS 277
>XTH18_ARATH (Q9M0D2) Probable xyloglucan endotransglucosylase/hydrolase protein| 18 precursor (EC 2.4.1.207) (At-XTH18) (XTH-18) Length = 282 Score = 47.0 bits (110), Expect = 1e-05 Identities = 18/26 (69%), Positives = 21/26 (80%) Frame = -3 Query: 326 VQSNYMIYNYCTDPKRFAQGVPAECS 249 VQS YM+YNYC D +RF +GVP ECS Sbjct: 257 VQSKYMVYNYCNDKRRFPRGVPVECS 282
>XTH25_ARATH (Q38907) Probable xyloglucan endotransglucosylase/hydrolase protein| 25 precursor (EC 2.4.1.207) (At-XTH25) (XTH-25) Length = 284 Score = 47.0 bits (110), Expect = 1e-05 Identities = 20/27 (74%), Positives = 20/27 (74%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAEC 252 R VQ YMIYNYCTD KRF QG P EC Sbjct: 256 RVVQRKYMIYNYCTDTKRFPQGFPKEC 282
>XTH15_ARATH (Q38911) Probable xyloglucan endotransglucosylase/hydrolase protein| 15 precursor (EC 2.4.1.207) (At-XTH15) (XTH-15) Length = 289 Score = 46.6 bits (109), Expect = 2e-05 Identities = 18/27 (66%), Positives = 21/27 (77%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAEC 252 RWVQ +MIYNYC+D KRF +G P EC Sbjct: 258 RWVQKYFMIYNYCSDLKRFPRGFPPEC 284
>XTH16_ARATH (Q8LG58) Probable xyloglucan endotransglucosylase/hydrolase protein| 16 precursor (EC 2.4.1.207) (At-XTH16) (XTH-16) Length = 291 Score = 46.2 bits (108), Expect = 2e-05 Identities = 18/27 (66%), Positives = 21/27 (77%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAEC 252 RWVQ +MIY+YC+D KRF QG P EC Sbjct: 260 RWVQKYFMIYDYCSDLKRFPQGFPPEC 286
>XTH8_ORYSA (Q76BW5) Xyloglucan endotransglycosylase/hydrolase protein 8| precursor (EC 2.4.1.207) (End-xyloglucan transferase) (OsXTH8) (OsXRT5) Length = 290 Score = 44.3 bits (103), Expect = 8e-05 Identities = 17/26 (65%), Positives = 18/26 (69%) Frame = -3 Query: 329 WVQSNYMIYNYCTDPKRFAQGVPAEC 252 W + NYM YNYC D RF QG PAEC Sbjct: 262 WAERNYMSYNYCADGWRFPQGFPAEC 287
>XTHA_PHAAN (Q41638) Xyloglucan endotransglucosylase/hydrolase protein A| precursor (EC 2.4.1.207) (VaXTH1) Length = 292 Score = 42.0 bits (97), Expect = 4e-04 Identities = 17/27 (62%), Positives = 22/27 (81%) Frame = -3 Query: 329 WVQSNYMIYNYCTDPKRFAQGVPAECS 249 WV++ Y IYNYCTD KR++Q VP EC+ Sbjct: 262 WVRNKYTIYNYCTDRKRYSQ-VPPECT 287
>XTH_SOYBN (Q39857) Probable xyloglucan endotransglucosylase/hydrolase| precursor (EC 2.4.1.207) (Fragment) Length = 295 Score = 41.6 bits (96), Expect = 5e-04 Identities = 16/27 (59%), Positives = 18/27 (66%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAEC 252 RWV+ Y IYNYCTD KR+ P EC Sbjct: 263 RWVRQKYTIYNYCTDTKRYPHISPPEC 289
>XTH_TOBAC (P93349) Probable xyloglucan endotransglucosylase/hydrolase protein| precursor (EC 2.4.1.207) Length = 295 Score = 39.3 bits (90), Expect = 0.002 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAECS 249 RWV+ Y IYNYCTD KR+ +P EC+ Sbjct: 264 RWVRQKYTIYNYCTDRKRYPT-LPPECT 290
>XTH7_ARATH (Q8LER3) Probable xyloglucan endotransglucosylase/hydrolase protein| 7 precursor (EC 2.4.1.207) (At-XTH7) (XTH-7) Length = 293 Score = 38.1 bits (87), Expect = 0.006 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAECS 249 RWV+ N+M+Y+YCTD RF P ECS Sbjct: 264 RWVRVNHMVYDYCTDKSRFPV-PPPECS 290
>XTHB_PHAAN (Q8LNZ5) Probable xyloglucan endotransglucosylase/hydrolase protein| B precursor (EC 2.4.1.207) (VaXTH2) Length = 293 Score = 36.2 bits (82), Expect = 0.021 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAEC 252 +WV+ + IYNYCTD R+ Q +P EC Sbjct: 262 KWVRQKFTIYNYCTDRTRYPQ-LPPEC 287
>XTH10_ARATH (Q9ZVK1) Probable xyloglucan endotransglucosylase/hydrolase protein| 10 precursor (EC 2.4.1.207) (At-XTH10) (XTH-10) Length = 299 Score = 36.2 bits (82), Expect = 0.021 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAECSM 246 +WV+ ++IY+YC D RF +P ECS+ Sbjct: 268 KWVRKYHLIYDYCQDYGRFNNKLPKECSL 296
>XTH6_ARATH (Q8LF99) Probable xyloglucan endotransglucosylase/hydrolase protein| 6 precursor (EC 2.4.1.207) (At-XTH6) (XTH-6) Length = 292 Score = 36.2 bits (82), Expect = 0.021 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAEC 252 RWV+ N+M+Y+YCTD RF P EC Sbjct: 265 RWVRVNHMVYDYCTDRSRFPV-PPPEC 290
>XTH_BRAOB (Q6YDN9) Xyloglucan endotransglucosylase/hydrolase precursor (EC| 2.4.1.207) (BobXET16A) Length = 295 Score = 35.8 bits (81), Expect = 0.027 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAEC 252 +WV+ + IYNYCTD RF +PAEC Sbjct: 264 KWVRMKWTIYNYCTDRTRFPV-MPAEC 289
>XTH4_ARATH (Q39099) Xyloglucan endotransglucosylase/hydrolase protein 4| precursor (EC 2.4.1.207) (At-XTH4) (XTH-4) Length = 296 Score = 35.8 bits (81), Expect = 0.027 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAEC 252 +WV+ + IYNYCTD RF +PAEC Sbjct: 265 KWVRMKWTIYNYCTDRTRFPV-MPAEC 290
>XTH1_LYCES (Q40144) Probable xyloglucan endotransglucosylase/hydrolase 1| precursor (EC 2.4.1.207) (LeXTH1) Length = 296 Score = 35.4 bits (80), Expect = 0.036 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAECS 249 RWV+ Y +YNYCTD R+ P EC+ Sbjct: 265 RWVRQKYTVYNYCTDKARYPV-PPPECT 291
>XTH31_ARATH (P93046) Probable xyloglucan endotransglucosylase/hydrolase protein| 31 precursor (EC 2.4.1.207) (At-XTH31) (XTH-31) (AtXTR8) Length = 293 Score = 35.4 bits (80), Expect = 0.036 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = -3 Query: 329 WVQSNYMIYNYCTDPKRFAQGVPAEC 252 W Q N+++YNYC DPKR P EC Sbjct: 269 WAQRNFLVYNYCHDPKRDHTQTP-EC 293
>XTH8_ARATH (Q8L9A9) Probable xyloglucan endotransglucosylase/hydrolase protein| 8 precursor (EC 2.4.1.207) (At-XTH8) (XTH-8) Length = 292 Score = 34.7 bits (78), Expect = 0.061 Identities = 14/28 (50%), Positives = 20/28 (71%) Frame = -3 Query: 329 WVQSNYMIYNYCTDPKRFAQGVPAECSM 246 WVQ N ++Y+YC D +RF +P ECS+ Sbjct: 262 WVQRNLVVYDYCKDSERFPT-LPWECSI 288
>XTH5_ARATH (Q9XIW1) Probable xyloglucan endotransglucosylase/hydrolase protein| 5 precursor (EC 2.4.1.207) (At-XTH5) (XTH-5) Length = 293 Score = 34.7 bits (78), Expect = 0.061 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKRFAQGVPAEC 252 +WV+ Y IYNYCTD RF P EC Sbjct: 262 KWVRKRYTIYNYCTDRVRFPV-PPPEC 287
>XTH9_ARATH (Q8LDW9) Xyloglucan endotransglucosylase/hydrolase protein 9| precursor (EC 2.4.1.207) (At-XTH9) (XTH-9) Length = 290 Score = 33.9 bits (76), Expect = 0.10 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = -3 Query: 329 WVQSNYMIYNYCTDPKRFAQGVPAEC 252 WV++N+MIY+YC D RF P EC Sbjct: 260 WVRANHMIYDYCFDATRFPV-TPLEC 284
>XTH_WHEAT (Q41542) Probable xyloglucan endotransglucosylase/hydrolase| precursor (EC 2.4.1.207) Length = 293 Score = 33.5 bits (75), Expect = 0.14 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = -3 Query: 329 WVQSNYMIYNYCTDPKRFAQGVPAEC 252 WV+ + IYNYCTD R+A P EC Sbjct: 263 WVRKEHTIYNYCTDHDRYAAMAP-EC 287
>XTH26_ARATH (Q9SVV2) Putative xyloglucan endotransglucosylase/hydrolase protein| 26 precursor (EC 2.4.1.207) (At-XTH26) (XTH-26) Length = 292 Score = 33.1 bits (74), Expect = 0.18 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -3 Query: 326 VQSNYMIYNYCTDPKRFAQGVPAECS 249 ++ +MIY+YC D RF +P ECS Sbjct: 263 IRDGFMIYDYCKDTNRFKGVMPPECS 288
>XTH32_ARATH (Q9SJL9) Probable xyloglucan endotransglucosylase/hydrolase protein| 32 precursor (EC 2.4.1.207) (At-XTH32) (XTH-32) Length = 299 Score = 33.1 bits (74), Expect = 0.18 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = -3 Query: 332 RWVQSNYMIYNYCTDPKR 279 RWVQ++ M+YNYC D KR Sbjct: 272 RWVQTHSMVYNYCKDYKR 289
>UL16_VZVD (P09293) Gene 44 protein| Length = 363 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 2/35 (5%) Frame = +3 Query: 63 KEQQKNLPPATFHLIPHTSTYLSYSTDAS--IFPI 161 + +Q NLPP TFH+I + + +SY+ A+ I+P+ Sbjct: 84 RPRQMNLPPKTFHVIVNFNYEVSYAMTATLRIYPV 118
>XTH3_ARATH (Q9LJR7) Probable xyloglucan endotransglucosylase/hydrolase protein| 3 precursor (EC 2.4.1.207) (At-XTH3) (XTH-3) Length = 290 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -3 Query: 326 VQSNYMIYNYCTDPKRFAQGVPAEC 252 V+S YM Y+YCTD ++ Q P EC Sbjct: 266 VRSKYMNYDYCTDRSKY-QTPPREC 289
>XTH33_ARATH (Q8LC45) Probable xyloglucan endotransglucosylase/hydrolase protein| 33 precursor (EC 2.4.1.207) (At-XTH33) (XTH-33) Length = 310 Score = 29.6 bits (65), Expect = 2.0 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = -3 Query: 329 WVQSNYMIYNYCTDPKRFAQGVPAECS 249 W + M Y+YC+D R+ + +PAEC+ Sbjct: 285 WARRKLMFYSYCSDKPRY-KVMPAECN 310
>PUM2_MOUSE (Q80U58) Pumilio homolog 2| Length = 1066 Score = 29.3 bits (64), Expect = 2.6 Identities = 20/61 (32%), Positives = 32/61 (52%) Frame = +1 Query: 82 YHRLHFTLSPTPVLIYHTVQTLPSSLSPVIFLRRSTYTRAVQC*LAGRTDGQGHYMEHSA 261 Y+ L F+ SP+P+ + QT SL+P L S++ + L G T+G G Y+ + Sbjct: 610 YNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSL--SSHGSSSSLHLGGLTNGSGRYISAAP 667 Query: 262 G 264 G Sbjct: 668 G 668
>PUM2_HUMAN (Q8TB72) Pumilio homolog 2 (Pumilio-2)| Length = 1066 Score = 29.3 bits (64), Expect = 2.6 Identities = 20/61 (32%), Positives = 32/61 (52%) Frame = +1 Query: 82 YHRLHFTLSPTPVLIYHTVQTLPSSLSPVIFLRRSTYTRAVQC*LAGRTDGQGHYMEHSA 261 Y+ L F+ SP+P+ + QT SL+P L S++ + L G T+G G Y+ + Sbjct: 610 YNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSL--SSHGSSSSLHLGGLTNGSGRYISAAP 667 Query: 262 G 264 G Sbjct: 668 G 668
>TBX8_CAEEL (Q22292) T-box transcription factor tbx-8| Length = 315 Score = 28.5 bits (62), Expect = 4.4 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = +1 Query: 1 RTEQDEAYTITHELSVSVIVTKSNRRIYHRLHFTL-SPTPVLIY 129 R +QD+ + + H +IVTKS R+++ +L + + TP +Y Sbjct: 10 REDQDKLWNLFHYHKNEMIVTKSGRKMFPKLEYVVRGLTPNKLY 53
>SPRE2_MOUSE (Q924S7) Sprouty-related, EVH1 domain-containing protein 2| (Spred-2) Length = 410 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +1 Query: 85 HRLHFTLSPTPVLIYHTVQTLPSSLSPVIF 174 HR +TL P P+ YH Q LP S V F Sbjct: 174 HRKIYTLDPYPMDHYHPDQRLPRSYPQVTF 203
>ACKA_NOCFA (Q5YNP4) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 402 Score = 28.1 bits (61), Expect = 5.7 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -1 Query: 283 RGSLRASPPSAPCSALVRPSVQQASIGQPVYTSIAGG 173 RG+ SPP+AP + LV P+ ++ +I + +A G Sbjct: 366 RGARVISPPAAPVTVLVVPTNEELAIARAADRLVAAG 402
>RS7_BDEBA (Q6MJ12) 30S ribosomal protein S7| Length = 157 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = -2 Query: 282 EVRSGRPRRVLHVVPLSVRPSSKLAL 205 EVRS R + VP+ VRPS +LAL Sbjct: 75 EVRSRRVGGATYQVPVDVRPSRRLAL 100
>TBX20_HUMAN (Q9UMR3) T-box transcription factor TBX20 (T-box protein 20)| (Fragment) Length = 251 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = +1 Query: 7 EQDEAYTITHELSVSVIVTKSNRRIYHRLHFTLS 108 E E + HEL +I+TKS RR++ + + S Sbjct: 60 ETKELWDKFHELGTEMIITKSGRRMFPTIRVSFS 93
>TBX20_MOUSE (Q9ES03) T-box transcription factor TBX20 (T-box protein 20)| Length = 297 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = +1 Query: 7 EQDEAYTITHELSVSVIVTKSNRRIYHRLHFTLS 108 E E + HEL +I+TKS RR++ + + S Sbjct: 104 ETKELWDKFHELGTEMIITKSGRRMFPTIRVSFS 137 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,485,724 Number of Sequences: 219361 Number of extensions: 1028540 Number of successful extensions: 3398 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 3123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3394 length of database: 80,573,946 effective HSP length: 86 effective length of database: 61,708,900 effective search space used: 1481013600 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
