ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet08b07 |
|---|---|
| Clone Library Name | barley_pub |
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 68.6 bits (166), Expect = 4e-12 Identities = 28/34 (82%), Positives = 32/34 (94%) Frame = -3 Query: 292 SAYPGTGPLENLATHLADPWHNNIGDIVIPRNIY 191 SAY GTGPLENLATHLADPWHNNIGD++IP+ I+ Sbjct: 211 SAYLGTGPLENLATHLADPWHNNIGDVIIPKGIF 244
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 37.7 bits (86), Expect = 0.008 Identities = 14/20 (70%), Positives = 15/20 (75%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNNI 221 G GP ENL HL+DPWHN I Sbjct: 227 GKGPFENLLQHLSDPWHNTI 246
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 86 GKGPLENLADHLADPVNNN 104
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 225 GKGPLENLADHLADPVNNN 243
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 235 GKGPLENLADHLADPVNNN 253
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 235 GKGPLENLADHLADPVNNN 253
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 235 GKGPLENLADHLADPVNNN 253
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 235 GKGPLENLADHLADPVNNN 253
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 236 GKGPLENLADHLADPVNNN 254
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 236 GKGPLENLADHLADPVNNN 254
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 234 GKGPLENLADHLADPVNNN 252
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 235 GKGPLENLADHLADPVNNN 253
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 234 GKGPLENLADHLADPVNNN 252
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 236 GKGPLENLADHLADPVNNN 254
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 236 GKGPLENLADHLADPVNNN 254
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 236 GKGPLENLADHLADPVNNN 254
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 235 GKGPLENLADHLADPVNNN 253
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 176 GKGPLENLADHLADPVNNN 194
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 237 GKGPLENLADHLADPVNNN 255
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 237 GKGPLENLADHLADPVNNN 255
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 237 GKGPLENLADHLADPVNNN 255
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 237 GKGPLENLADHLADPVNNN 255
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 237 GKGPLENLADHLADPVNNN 255
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 237 GKGPLENLADHLADPVNNN 255
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 237 GKGPLENLADHLADPVNNN 255
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 226 GKGPLENLADHLADPVNNN 244
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 239 GKGPLENLADHLADPVNNN 257
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 94 GKGPLENLADHLADPVNNN 112
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 35.0 bits (79), Expect = 0.049 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = -3 Query: 286 YPGTGPLENLATHLADPWHNNI 221 Y GTGP++NL HLADP H I Sbjct: 242 YTGTGPIDNLFAHLADPGHATI 263
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 35.0 bits (79), Expect = 0.049 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = -3 Query: 286 YPGTGPLENLATHLADPWHNNI 221 Y GTGP++NL HLADP H I Sbjct: 242 YTGTGPIDNLFAHLADPGHATI 263
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 231 GKGPLENLADHLADPVNNN 249
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 35.0 bits (79), Expect = 0.049 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLADP +NN Sbjct: 198 GKGPLENLADHLADPVNNN 216
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 34.3 bits (77), Expect = 0.083 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP+ENLA HLADP +NN Sbjct: 244 GKGPIENLADHLADPVNNN 262
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 34.3 bits (77), Expect = 0.083 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA H+ADP +NN Sbjct: 235 GKGPLENLADHIADPVNNN 253
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 34.3 bits (77), Expect = 0.083 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA H+ADP +NN Sbjct: 237 GKGPLENLADHIADPVNNN 255
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 34.3 bits (77), Expect = 0.083 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA H+ADP +NN Sbjct: 237 GKGPLENLADHIADPVNNN 255
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 34.3 bits (77), Expect = 0.083 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP+ENLA HLADP +NN Sbjct: 237 GKGPIENLADHLADPVNNN 255
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 34.3 bits (77), Expect = 0.083 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP+ENLA HLADP +NN Sbjct: 237 GKGPIENLADHLADPVNNN 255
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 34.3 bits (77), Expect = 0.083 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA H+ADP +NN Sbjct: 232 GKGPLENLADHIADPVNNN 250
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 34.3 bits (77), Expect = 0.083 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP+ENLA HLADP +NN Sbjct: 248 GKGPIENLADHLADPVNNN 266
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 34.3 bits (77), Expect = 0.083 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP+ENLA HLADP +NN Sbjct: 248 GKGPIENLADHLADPVNNN 266
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 34.3 bits (77), Expect = 0.083 Identities = 13/24 (54%), Positives = 19/24 (79%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNNIGDIV 209 G GP+ENLA HL+DP+ NN+ ++ Sbjct: 247 GEGPVENLAKHLSDPFGNNLLTVI 270
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 33.9 bits (76), Expect = 0.11 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HL+DP +NN Sbjct: 238 GKGPLENLADHLSDPVNNN 256
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 33.5 bits (75), Expect = 0.14 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLA+P +NN Sbjct: 215 GKGPLENLADHLAEPVNNN 233
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 33.5 bits (75), Expect = 0.14 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HL DP +NN Sbjct: 237 GKGPLENLADHLVDPVNNN 255
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 33.5 bits (75), Expect = 0.14 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = -3 Query: 292 SAYPGTGPLENLATHLADPWHNNIGD 215 +A G GPL N ATHL+DP H I D Sbjct: 257 AAATGKGPLNNWATHLSDPLHTTIID 282
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 33.5 bits (75), Expect = 0.14 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = -3 Query: 292 SAYPGTGPLENLATHLADPWHNNIGD 215 +A G GPL N ATHL+DP H I D Sbjct: 260 AAATGKGPLNNWATHLSDPLHTTIID 285
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 32.7 bits (73), Expect = 0.24 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP+ENLA HL DP +NN Sbjct: 234 GKGPIENLADHLTDPVNNN 252
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 32.3 bits (72), Expect = 0.32 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLE+LA H+ADP +NN Sbjct: 236 GKGPLEDLADHIADPVNNN 254
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 32.3 bits (72), Expect = 0.32 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPL+NL HLADP +NN Sbjct: 237 GKGPLDNLVDHLADPVNNN 255
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 32.3 bits (72), Expect = 0.32 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP+ENLA H+ADP NN Sbjct: 234 GKGPIENLADHIADPVANN 252
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 32.3 bits (72), Expect = 0.32 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP++NLA HLADP NN Sbjct: 226 GKGPIQNLADHLADPGTNN 244
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 32.3 bits (72), Expect = 0.32 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENLA HLA P +NN Sbjct: 233 GKGPLENLADHLAGPVNNN 251
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 31.6 bits (70), Expect = 0.54 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP+ENL+ HLADP NN Sbjct: 235 GKGPIENLSDHLADPAVNN 253
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 31.6 bits (70), Expect = 0.54 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNNI 221 G GP +NL HLADP +NN+ Sbjct: 247 GVGPYQNLLDHLADPVNNNV 266
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 31.6 bits (70), Expect = 0.54 Identities = 14/19 (73%), Positives = 14/19 (73%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENL HLADP NN Sbjct: 238 GKGPLENLNDHLADPVANN 256
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 31.2 bits (69), Expect = 0.70 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP+ENL+ H+ADP NN Sbjct: 207 GKGPIENLSDHIADPVANN 225
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 30.8 bits (68), Expect = 0.92 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP+ENL HLADP NN Sbjct: 236 GKGPIENLYDHLADPVANN 254
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 0.92 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP+ENL HLADP NN Sbjct: 235 GKGPIENLFDHLADPVANN 253
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 30.8 bits (68), Expect = 0.92 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP+ENL HLADP NN Sbjct: 120 GKGPIENLYDHLADPVANN 138
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 30.4 bits (67), Expect = 1.2 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP+ENL HLA+P NN Sbjct: 244 GKGPIENLTDHLANPAENN 262
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 29.6 bits (65), Expect = 2.0 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP+ENL H+ADP NN Sbjct: 235 GKGPIENLYDHVADPVANN 253
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 29.6 bits (65), Expect = 2.0 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP+ENL H+ADP NN Sbjct: 235 GKGPIENLFDHVADPVANN 253
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 29.6 bits (65), Expect = 2.0 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP+ENL H+ADP NN Sbjct: 233 GKGPIENLFDHVADPVANN 251
>BAZ2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain 2A (Transcription| termination factor I-interacting protein 5) (TTF-I-interacting protein 5) (Tip5) (hWALp3) Length = 1878 Score = 29.6 bits (65), Expect = 2.0 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Frame = -2 Query: 290 GVPRHRPAGEPGHAPRGP--VAQQHRRHRHPQKYLRPL 183 G+ R AG+PG P+ P + Q RR R P K+ + + Sbjct: 1354 GLAPKRRAGDPGEMPQSPTGLGQPKRRGRPPSKFFKQM 1391
>FABP6_CAEEL (O01812) Fatty acid-binding protein homolog 6| Length = 135 Score = 29.6 bits (65), Expect = 2.0 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 5/51 (9%) Frame = +2 Query: 23 GRRADVVVQFQHARTVRAQ-----SQRGKVINQWIDSET*MKTMRSGSSIS 160 GR VV F++ + + Q S + +I +W++ + + T+ SGS +S Sbjct: 78 GRTVKSVVNFENGKFIHIQKKIKDSDKESIITRWLEGDKLITTLESGSVVS 128
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/19 (68%), Positives = 13/19 (68%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENL HL DP NN Sbjct: 238 GKGPLENLFDHLDDPVANN 256
>NFAC3_MOUSE (P97305) Nuclear factor of activated T-cells, cytoplasmic 3| (NF-ATc3) (NFATc3) (T cell transcription factor NFAT4) (NF-AT4) (NFATx) Length = 1075 Score = 29.3 bits (64), Expect = 2.7 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -2 Query: 284 PRHRPAGEPGHAPRGPVAQ 228 P H P PGH+PRG V + Sbjct: 289 PHHSPVPSPGHSPRGSVTE 307
>NFAC3_HUMAN (Q12968) Nuclear factor of activated T-cells, cytoplasmic 3| (NF-ATc3) (NFATc3) (T cell transcription factor NFAT4) (NF-AT4) (NFATx) Length = 1075 Score = 29.3 bits (64), Expect = 2.7 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -2 Query: 284 PRHRPAGEPGHAPRGPVAQ 228 P H P PGH+PRG V + Sbjct: 289 PHHSPVPSPGHSPRGSVTE 307
>OR6N2_HUMAN (Q8NGY6) Olfactory receptor 6N2| Length = 317 Score = 29.3 bits (64), Expect = 2.7 Identities = 9/29 (31%), Positives = 16/29 (55%) Frame = -1 Query: 132 FIHVSESIHWLITLPRWLCARTVRACWNC 46 ++ + +H+ I + LCA+ ACW C Sbjct: 123 YLAICRPLHYPIIMTTTLCAKMAAACWTC 151
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 28.9 bits (63), Expect = 3.5 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP+ENL+ H+ DP NN Sbjct: 235 GKGPIENLSDHINDPVANN 253
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 28.5 bits (62), Expect = 4.6 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GP++NL H+ADP NN Sbjct: 235 GKGPIQNLYDHVADPVANN 253
>FAF_DROME (P55824) Probable ubiquitin carboxyl-terminal hydrolase FAF (EC| 3.1.2.15) (Ubiquitin thioesterase FAF) (Ubiquitin specific-processing protease FAF) (Deubiquitinating enzyme FAF) (Protein fat facets) Length = 2778 Score = 28.1 bits (61), Expect = 6.0 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Frame = -1 Query: 129 IHVSESIHWLITLPR----WLCARTVRACWNCTTTSALRPATFVMC 4 + ++E + +L L + WLCA + W+C +A+ PA C Sbjct: 728 VQIAERLEFLKFLLKDGQLWLCADQAKQIWHCLAVNAVFPADREEC 773
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 27.7 bits (60), Expect = 7.8 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = -3 Query: 280 GTGPLENLATHLADPWHN 227 G GP++NL HLADP N Sbjct: 223 GKGPVQNLTDHLADPTVN 240
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 27.7 bits (60), Expect = 7.8 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = -3 Query: 280 GTGPLENLATHLADPWHNN 224 G GPLENL HL +P NN Sbjct: 235 GKGPLENLLDHLDNPVANN 253 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,102,162 Number of Sequences: 219361 Number of extensions: 722427 Number of successful extensions: 2417 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 2289 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2411 length of database: 80,573,946 effective HSP length: 73 effective length of database: 64,560,593 effective search space used: 1549454232 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
