>RPGF3_MOUSE (Q8VCC8) Rap guanine nucleotide exchange factor 3 (cAMP-regulated|
           guanine nucleotide exchange factor I) (cAMP-GEFI)
           (Exchange factor directly activated by cAMP 1) (Epac 1)
          Length = 876

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -3

Query: 349 DLQFRSSPGRTPRPTGTQDTRATFQQRVQNSISSICERCSDSKL 218
           D QF   PG  P PTGTQD     ++ +  +++ + +R  D+ L
Sbjct: 136 DAQFYRFPGPEPEPTGTQDV----EEELVEAMALLSQRGPDALL 175

>EX7L_AGRT5 (Q8UIM4) Probable exodeoxyribonuclease VII large subunit (EC|
           3.1.11.6) (Exonuclease VII large subunit)
          Length = 532

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
 Frame = -3

Query: 322 RTPRPTGTQDTRATFQQRVQNSISSICERCSDS------KLREG*RALVRA 188
           R P PTG  +     +  ++  +S +  R S S        R+G RALVRA
Sbjct: 264 RAPTPTGAAEMAVPVRAELEAQLSGLAARLSGSVSRQMDNRRQGVRALVRA 314

>YO08_BPS2 (P69623) Hypothetical 10.8 kDa protein in cox-rep intergenic region|
           (ORF8) (ORF24)
          Length = 93

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 126 DGLYKRVGGGSCLRPPGLFEVHIYCCCCQEK 34
           +G Y+R GG  C   P L +  IYC    EK
Sbjct: 32  NGTYQRKGGAVCKDLPSLLDKLIYCELMNEK 62

>YO08_BPHP1 (P69622) Hypothetical 10.8 kDa protein in cox-rep intergenic region|
           (ORF8) (ORF24)
          Length = 93

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 126 DGLYKRVGGGSCLRPPGLFEVHIYCCCCQEK 34
           +G Y+R GG  C   P L +  IYC    EK
Sbjct: 32  NGTYQRKGGAVCKDLPSLLDKLIYCELMNEK 62

>BXEN_CLOBU (Q06366) Botulinum neurotoxin type E, nontoxic component|
          Length = 1162

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 19  YCSHSFFLTTTAVYMNFEQAWWSQ 90
           YC ++F+L    +Y NF   WW+Q
Sbjct: 618 YCKNNFYLKK--IYYNFLDQWWTQ 639

>BXEN_CLOBO (P46082) Botulinum neurotoxin type E, nontoxic component|
          Length = 1162

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 19  YCSHSFFLTTTAVYMNFEQAWWSQ 90
           YC ++F+L    +Y NF   WW+Q
Sbjct: 618 YCKNNFYLKK--IYYNFLDQWWTQ 639

>FTSZ_PSEPK (Q59692) Cell division protein ftsZ|
          Length = 398

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
 Frame = -2

Query: 350 RPAVQILSREDPEAHRNTRHAGDVSTA----SSELNKLHM*AMLRQQVE 216
           +PAV     E P   RN  HAG  + A      +L+ L + A LR+Q +
Sbjct: 350 QPAVNYRDLERPTVMRNQAHAGAAAAAKLNPQDDLDYLDIPAFLRRQAD 398

>PXA2_YEAST (P34230) Peroxisomal long-chain fatty acid import protein 1|
          (Peroxisomal ABC transporter 2)
          Length = 853

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -3

Query: 76 LVRSSYILLLLSRKMNANNNVQN 8
          L+RSSYI+LLL+   N+N++  N
Sbjct: 16 LLRSSYIILLLATLYNSNSSSSN 38

>GPA33_MOUSE (Q9JKA5) Cell surface A33 antigen precursor (Glycoprotein A33)|
           (mA33)
          Length = 319

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 120 LYKRVGGGSCLRPPGLFEVHIYCCCCQEK 34
           LY  + GG  +    +  V +YCCCC+EK
Sbjct: 237 LYAGIAGGVFVALI-IIGVIVYCCCCREK 264


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,184,600
Number of Sequences: 219361
Number of extensions: 826178
Number of successful extensions: 2340
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2337
length of database: 80,573,946
effective HSP length: 92
effective length of database: 60,392,734
effective search space used: 1449425616
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)