ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet07d08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK193328.1| Mus musculus cDNA, clone:Y1G0111N17, strand:minu... 42 0.49
2gb|AC125072.2| Mus musculus BAC clone RP23-458I4 from 3, complet... 40 1.9
3ref|XM_760193.1| Theileria parva strain Muguga hypothetical prot... 40 1.9
4gb|AC144713.2| Danio rerio clone CH211-6O1, complete sequence 40 1.9
5gb|AC157578.7| Mus musculus chromosome 3, clone RP24-179O3, comp... 40 1.9
6emb|CR524821.5| Zebrafish DNA sequence from clone CH211-192F15 i... 40 1.9
7gb|AC113405.2| Homo sapiens chromosome 5 clone RP11-467C9, compl... 40 1.9
8gb|AC022104.3|AC022104 Homo sapiens chromosome 5 clone CTC-257B1... 40 1.9
9emb|AL954307.7| Zebrafish DNA sequence from clone CH211-201C19, ... 40 1.9
10gb|AC118646.23| Mus musculus chromosome 15, clone RP24-116A18, c... 38 7.7
11gb|AC149267.1| Solanum demissum chromosome 5 clone PGEC747E24 ma... 38 7.7
12gb|AC158993.2| Mus musculus BAC clone RP24-427N13 from chromosom... 38 7.7
13ref|XM_416725.1| PREDICTED: Gallus gallus similar to Biotin--pro... 38 7.7
14gb|AY809656.1| Schistosoma japonicum SJCHGC05943 protein mRNA, p... 38 7.7
15gb|AC160931.2| Mus musculus BAC clone RP24-311F12 from chromosom... 38 7.7
16gb|BC005534.1| Mus musculus cyclin G1, mRNA (cDNA clone MGC:7684... 38 7.7
17gb|AC124757.4| Mus musculus BAC clone RP23-116P5 from 8, complet... 38 7.7
18gb|AC098887.4| Mus musculus BAC clone RP23-122N6 from 10, comple... 38 7.7
19gb|AC158991.2| Mus musculus BAC clone RP24-488G14 from chromosom... 38 7.7
20ref|NM_009831.2| Mus musculus cyclin G1 (Ccng1), mRNA 38 7.7
21emb|AL451140.15| Human DNA sequence from clone RP11-540H22 on ch... 38 7.7
22emb|AL450304.33| Human DNA sequence from clone RP11-505O17 on ch... 38 7.7
23emb|AL356131.12| Human DNA sequence from clone RP1-91N13 on chro... 38 7.7
24emb|AL035688.8|HS173A13 Human DNA sequence from clone RP1-173A13... 38 7.7
25gb|AY269186.1| Homo sapiens clone cosmid B47c39, complete sequence 38 7.7
26emb|BX004968.20| Zebrafish DNA sequence from clone DKEY-35I13 in... 38 7.7
27emb|CR378667.1| Photobacterium profundum SS9; segment 5/12 38 7.7
28emb|AL645546.5| Mouse DNA sequence from clone RP23-124G18 on chr... 38 7.7
29emb|CR385046.9| Zebrafish DNA sequence from clone CH211-217P23 i... 38 7.7
30emb|BX914211.5| Zebrafish DNA sequence from clone DKEY-91D10 in ... 38 7.7
31emb|BX511023.8| Zebrafish DNA sequence from clone DKEY-148A12 in... 38 7.7
32gb|AC016465.8| Homo sapiens, clone RP11-11K9, complete sequence 38 7.7
33gb|AC008877.9| Homo sapiens chromosome 5 clone CTD-2204B21, comp... 38 7.7
34gb|AC016599.6| Homo sapiens chromosome 5 clone CTD-2054D19, comp... 38 7.7
35gb|AC153886.3| Mus musculus 10 BAC RP23-461H13 (Roswell Park Can... 38 7.7
36gb|AC092458.5| Homo sapiens BAC clone RP13-612N21 from 4, comple... 38 7.7
37gb|AC016751.7| Homo sapiens BAC clone RP11-504O20 from 2, comple... 38 7.7
38gb|AC012447.8| Homo sapiens BAC clone RP11-204L24 from 2, comple... 38 7.7
39dbj|AK197647.1| Mus musculus cDNA, clone:Y1G0125L14, strand:plus... 38 7.7
40dbj|BS000087.1| Pan troglodytes chromosome 22 clone:RP43-110O22,... 38 7.7
41gb|AC161198.5| Mus musculus chromosome 15, clone RP23-34E23, com... 38 7.7
42gb|BC006609.1| Mus musculus cDNA clone IMAGE:3966880, containing... 38 7.7
43emb|AL954313.6| Zebrafish DNA sequence from clone CH211-257J20 i... 38 7.7
44emb|AL929131.5| Zebrafish DNA sequence from clone CH211-286O17, ... 38 7.7
45emb|AL607084.14| Mouse DNA sequence from clone RP23-272N19 on ch... 38 7.7

>dbj|AK193328.1| Mus musculus cDNA, clone:Y1G0111N17, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000020576, based on BLAT search
          Length = 152

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 53  aaaatgattgaaatgcaaaca 73
           |||||||||||||||||||||
Sbjct: 127 aaaatgattgaaatgcaaaca 147



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>gb|AC125072.2| Mus musculus BAC clone RP23-458I4 from 3, complete sequence
          Length = 192026

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     caaacacacaaccaaacaca 87
              ||||||||||||||||||||
Sbjct: 179664 caaacacacaaccaaacaca 179683



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>ref|XM_760193.1| Theileria parva strain Muguga hypothetical protein (TP02_0719)
           partial mRNA
          Length = 924

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 46  ggtaaacaaaatgattgaaa 65
           ||||||||||||||||||||
Sbjct: 756 ggtaaacaaaatgattgaaa 737



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>gb|AC144713.2| Danio rerio clone CH211-6O1, complete sequence
          Length = 153992

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 68   caaacacacaaccaaacaca 87
            ||||||||||||||||||||
Sbjct: 2612 caaacacacaaccaaacaca 2593



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>gb|AC157578.7| Mus musculus chromosome 3, clone RP24-179O3, complete sequence
          Length = 172143

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    caaacacacaaccaaacaca 87
             ||||||||||||||||||||
Sbjct: 67579 caaacacacaaccaaacaca 67560



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>emb|CR524821.5| Zebrafish DNA sequence from clone CH211-192F15 in linkage group 16,
             complete sequence
          Length = 152728

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    caaacacacaaccaaacaca 87
             ||||||||||||||||||||
Sbjct: 60226 caaacacacaaccaaacaca 60245



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>gb|AC113405.2| Homo sapiens chromosome 5 clone RP11-467C9, complete sequence
          Length = 134319

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    acacacaaccaaacacaagt 90
             ||||||||||||||||||||
Sbjct: 72047 acacacaaccaaacacaagt 72028



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>gb|AC022104.3|AC022104 Homo sapiens chromosome 5 clone CTC-257B12, complete sequence
          Length = 160703

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     acacacaaccaaacacaagt 90
              ||||||||||||||||||||
Sbjct: 147209 acacacaaccaaacacaagt 147228



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>emb|AL954307.7| Zebrafish DNA sequence from clone CH211-201C19, complete sequence
          Length = 175575

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     caaacacacaaccaaacaca 87
              ||||||||||||||||||||
Sbjct: 130664 caaacacacaaccaaacaca 130645



 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     caaacacacaaccaaacaca 87
              ||||||||||||||||||||
Sbjct: 130608 caaacacacaaccaaacaca 130589



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>gb|AC118646.23| Mus musculus chromosome 15, clone RP24-116A18, complete sequence
          Length = 205272

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 70    aacacacaaccaaacacaa 88
             |||||||||||||||||||
Sbjct: 37520 aacacacaaccaaacacaa 37502



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>gb|AC149267.1| Solanum demissum chromosome 5 clone PGEC747E24 map MAP_LOC, complete
            sequence
          Length = 92340

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 63   aaatgcaaacacacaacca 81
            |||||||||||||||||||
Sbjct: 6571 aaatgcaaacacacaacca 6589



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>gb|AC158993.2| Mus musculus BAC clone RP24-427N13 from chromosome 7, complete sequence
          Length = 179746

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 60     ttgaaatgcaaacacacaa 78
              |||||||||||||||||||
Sbjct: 168951 ttgaaatgcaaacacacaa 168933



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>ref|XM_416725.1| PREDICTED: Gallus gallus similar to Biotin--protein ligase (Biotin
            apo-protein ligase) (LOC418516), mRNA
          Length = 3004

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 68   caaacacacaaccaaacac 86
            |||||||||||||||||||
Sbjct: 2779 caaacacacaaccaaacac 2761



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>gb|AY809656.1| Schistosoma japonicum SJCHGC05943 protein mRNA, partial cds
          Length = 1781

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 48  taaacaaaatgattgaaat 66
           |||||||||||||||||||
Sbjct: 879 taaacaaaatgattgaaat 861



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>gb|AC160931.2| Mus musculus BAC clone RP24-311F12 from chromosome 12, complete
             sequence
          Length = 167090

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 71    acacacaaccaaacacaag 89
             |||||||||||||||||||
Sbjct: 78229 acacacaaccaaacacaag 78211



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>gb|BC005534.1| Mus musculus cyclin G1, mRNA (cDNA clone MGC:7684 IMAGE:3497034),
            complete cds
          Length = 3151

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 53   aaaatgattgaaatgcaaa 71
            |||||||||||||||||||
Sbjct: 3120 aaaatgattgaaatgcaaa 3138



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>gb|AC124757.4| Mus musculus BAC clone RP23-116P5 from 8, complete sequence
          Length = 210427

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 59     attgaaatgcaaacacaca 77
              |||||||||||||||||||
Sbjct: 186226 attgaaatgcaaacacaca 186208



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>gb|AC098887.4| Mus musculus BAC clone RP23-122N6 from 10, complete sequence
          Length = 211397

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    acaaaatgattgaaatgca 69
             |||||||||||||||||||
Sbjct: 25300 acaaaatgattgaaatgca 25282



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>gb|AC158991.2| Mus musculus BAC clone RP24-488G14 from chromosome 7, complete sequence
          Length = 210271

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    ttgaaatgcaaacacacaa 78
             |||||||||||||||||||
Sbjct: 74952 ttgaaatgcaaacacacaa 74934



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>ref|NM_009831.2| Mus musculus cyclin G1 (Ccng1), mRNA
          Length = 3501

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 53   aaaatgattgaaatgcaaa 71
            |||||||||||||||||||
Sbjct: 3470 aaaatgattgaaatgcaaa 3488



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>emb|AL451140.15| Human DNA sequence from clone RP11-540H22 on chromosome 9 Contains the 5'
              end of a novel gene and the 3' end of a novel gene,
              complete sequence
          Length = 187738

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 67     gcaaacacacaaccaaaca 85
              |||||||||||||||||||
Sbjct: 130163 gcaaacacacaaccaaaca 130181



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>emb|AL450304.33| Human DNA sequence from clone RP11-505O17 on chromosome 1 Contains the 5'
              end of a gene for a novel protein, a processed pseudogene
              similar to natural cytotoxicity triggering receptor 1
              (NCR1), a processed pseudogene similar to keratin 18
              (KRT18), the 5' end of the LAMC1 for laminin, gamma 1
              (formerly LAMB2) and CpG island, complete sequence
          Length = 172837

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 63     aaatgcaaacacacaaccaaacacaag 89
              |||||||||||||||| || |||||||
Sbjct: 154898 aaatgcaaacacacaaacacacacaag 154872



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>emb|AL356131.12| Human DNA sequence from clone RP1-91N13 on chromosome 6 Contains a
             proteasome subunit alpha type 4 (PROS29) pseudogene,
             complete sequence
          Length = 170095

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 70    aacacacaaccaaacacaa 88
             |||||||||||||||||||
Sbjct: 88074 aacacacaaccaaacacaa 88092



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>emb|AL035688.8|HS173A13 Human DNA sequence from clone RP1-173A13 on chromosome 6 Contains a
             proteasome component C9 (macropain subunit C9) (PSMA4)
             pseudogene, complete sequence
          Length = 148870

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 70    aacacacaaccaaacacaa 88
             |||||||||||||||||||
Sbjct: 46317 aacacacaaccaaacacaa 46299



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>gb|AY269186.1| Homo sapiens clone cosmid B47c39, complete sequence
          Length = 38773

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 69    aaacacacaaccaaacaca 87
             |||||||||||||||||||
Sbjct: 25684 aaacacacaaccaaacaca 25666



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>emb|BX004968.20| Zebrafish DNA sequence from clone DKEY-35I13 in linkage group 15,
              complete sequence
          Length = 208706

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 65     atgcaaacacacaaccaaa 83
              |||||||||||||||||||
Sbjct: 204772 atgcaaacacacaaccaaa 204754



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>emb|CR378667.1| Photobacterium profundum SS9; segment 5/12
          Length = 349080

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 59     attgaaatgcaaacacaca 77
              |||||||||||||||||||
Sbjct: 292732 attgaaatgcaaacacaca 292750



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>emb|AL645546.5| Mouse DNA sequence from clone RP23-124G18 on chromosome 13 Contains the
             V1ri3, V1ri6, V1rh4, V1rh19 and V1rh21 genes for
             vomeronasal 1 receptor proteins I3, I6, H4, H19 and H21, a
             V1rh and a V1ri pseudogene and a fatty acid elongase 2
             pseudogene, complete sequence
          Length = 122517

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 50    aacaaaatgattgaaatgc 68
             |||||||||||||||||||
Sbjct: 82539 aacaaaatgattgaaatgc 82557



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>emb|CR385046.9| Zebrafish DNA sequence from clone CH211-217P23 in linkage group 8,
              complete sequence
          Length = 206751

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 25     tcatttactccacatacca 43
              |||||||||||||||||||
Sbjct: 154578 tcatttactccacatacca 154596



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>emb|BX914211.5| Zebrafish DNA sequence from clone DKEY-91D10 in linkage group 3,
             complete sequence
          Length = 179226

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 66    tgcaaacacacaaccaaacacaa 88
             |||||||||||||||||| ||||
Sbjct: 94286 tgcaaacacacaaccaaagacaa 94264



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>emb|BX511023.8| Zebrafish DNA sequence from clone DKEY-148A12 in linkage group 2,
              complete sequence
          Length = 244788

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 59     attgaaatgcaaacacaca 77
              |||||||||||||||||||
Sbjct: 210359 attgaaatgcaaacacaca 210341



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>gb|AC016465.8| Homo sapiens, clone RP11-11K9, complete sequence
          Length = 161082

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 61    tgaaatgcaaacacacaac 79
             |||||||||||||||||||
Sbjct: 49972 tgaaatgcaaacacacaac 49990



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>gb|AC008877.9| Homo sapiens chromosome 5 clone CTD-2204B21, complete sequence
          Length = 163575

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 67    gcaaacacacaaccaaaca 85
             |||||||||||||||||||
Sbjct: 44673 gcaaacacacaaccaaaca 44655



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>gb|AC016599.6| Homo sapiens chromosome 5 clone CTD-2054D19, complete sequence
          Length = 173736

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 67   gcaaacacacaaccaaaca 85
            |||||||||||||||||||
Sbjct: 1726 gcaaacacacaaccaaaca 1708



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>gb|AC153886.3| Mus musculus 10 BAC RP23-461H13 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 155429

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    acaaaatgattgaaatgca 69
             |||||||||||||||||||
Sbjct: 45217 acaaaatgattgaaatgca 45199



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>gb|AC092458.5| Homo sapiens BAC clone RP13-612N21 from 4, complete sequence
          Length = 126619

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 49   aaacaaaatgattgaaatgcaaa 71
            ||||||||||| |||||||||||
Sbjct: 4710 aaacaaaatgaatgaaatgcaaa 4732



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>gb|AC016751.7| Homo sapiens BAC clone RP11-504O20 from 2, complete sequence
          Length = 176379

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 49     aaacaaaatgattgaaatg 67
              |||||||||||||||||||
Sbjct: 154678 aaacaaaatgattgaaatg 154660



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>gb|AC012447.8| Homo sapiens BAC clone RP11-204L24 from 2, complete sequence
          Length = 166305

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 47    gtaaacaaaatgattgaaa 65
             |||||||||||||||||||
Sbjct: 87976 gtaaacaaaatgattgaaa 87958



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>dbj|AK197647.1| Mus musculus cDNA, clone:Y1G0125L14, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000020576, based on BLAT search
          Length = 153

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 53  aaaatgattgaaatgcaaa 71
           |||||||||||||||||||
Sbjct: 127 aaaatgattgaaatgcaaa 145



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>dbj|BS000087.1| Pan troglodytes chromosome 22 clone:RP43-110O22, map 22, complete
             sequences
          Length = 156630

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 63    aaatgcaaacacacaaccaaaca 85
             ||||||||||||||| |||||||
Sbjct: 82172 aaatgcaaacacacatccaaaca 82194



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>gb|AC161198.5| Mus musculus chromosome 15, clone RP23-34E23, complete sequence
          Length = 237801

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 70     aacacacaaccaaacacaa 88
              |||||||||||||||||||
Sbjct: 176189 aacacacaaccaaacacaa 176171



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>gb|BC006609.1| Mus musculus cDNA clone IMAGE:3966880, containing frame-shift errors
          Length = 3385

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 53   aaaatgattgaaatgcaaa 71
            |||||||||||||||||||
Sbjct: 3353 aaaatgattgaaatgcaaa 3371



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>emb|AL954313.6| Zebrafish DNA sequence from clone CH211-257J20 in linkage group 11,
             complete sequence
          Length = 156381

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 17    taaggccgtcatttactccacat 39
             ||||||| |||||||||||||||
Sbjct: 94103 taaggccatcatttactccacat 94081



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>emb|AL929131.5| Zebrafish DNA sequence from clone CH211-286O17, complete sequence
          Length = 152081

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 65     atgcaaacacacaaccaaacaca 87
              ||||||||||||||||| |||||
Sbjct: 102922 atgcaaacacacaaccatacaca 102900



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>emb|AL607084.14| Mouse DNA sequence from clone RP23-272N19 on chromosome 4, complete
             sequence
          Length = 113877

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 69    aaacacacaaccaaacaca 87
             |||||||||||||||||||
Sbjct: 65749 aaacacacaaccaaacaca 65767


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,360,646
Number of Sequences: 3902068
Number of extensions: 1360646
Number of successful extensions: 116111
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116020
Number of HSP's gapped (non-prelim): 91
length of query: 159
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 137
effective length of database: 17,147,199,772
effective search space: 2349166368764
effective search space used: 2349166368764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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