>CLCG_ARATH (P60300) Putative chloride channel-like protein CLC-g|
          Length = 763

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 31/42 (73%), Positives = 35/42 (83%)
 Frame = -1

Query: 307 LVVPKACDRSPVVGILTRHDFMPEHILGLHPVLLGGRWKRLR 182
           LV+PK  +R PVVGILTRHDFMPEHILGLHP +   +WKRLR
Sbjct: 715 LVIPKTSNRPPVVGILTRHDFMPEHILGLHPSVSRSKWKRLR 756

>CLCC_ARATH (Q96282) Chloride channel protein CLC-c (AtCLC-c)|
          Length = 779

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 23/30 (76%), Positives = 26/30 (86%)
 Frame = -1

Query: 304 VVPKACDRSPVVGILTRHDFMPEHILGLHP 215
           VVPK   R P+VGILTRHDFMPEH+LGL+P
Sbjct: 744 VVPKTPGRPPIVGILTRHDFMPEHVLGLYP 773

>CLCA_ARATH (P92941) Chloride channel protein CLC-a (AtCLC-a)|
          Length = 775

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 19/35 (54%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -1

Query: 307 LVVPK--ACDRSPVVGILTRHDFMPEHILGLHPVL 209
           LVVPK  A   SPV+GILTR D    +IL   P L
Sbjct: 732 LVVPKIQASGMSPVIGILTRQDLRAYNILQAFPHL 766

>CLCB_ARATH (P92942) Chloride channel protein CLC-b (AtCLC-b)|
          Length = 780

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -1

Query: 307 LVVPK--ACDRSPVVGILTRHDFMPEHILGLHPVL 209
           L+VPK  A    PVVGILTR D    +IL   P+L
Sbjct: 737 LIVPKIQASGMCPVVGILTRQDLRAYNILQAFPLL 771

>THAP1_PONPY (Q5RCE4) THAP domain-containing protein 1|
          Length = 213

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 74  QQNAGGNIYVCFYASAAVGEPHDEVAEVLADGGLVPPEPFPPASEQ 211
           ++NA   I++C        EPHD+  ++L     +PP P PP   Q
Sbjct: 73  KENAVPTIFLCT-------EPHDKKEDLLEPQEQLPPPPLPPPVSQ 111

>THAP1_HUMAN (Q9NVV9) THAP domain-containing protein 1|
          Length = 213

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 74  QQNAGGNIYVCFYASAAVGEPHDEVAEVLADGGLVPPEPFPPASEQ 211
           ++NA   I++C        EPHD+  ++L     +PP P PP   Q
Sbjct: 73  KENAVPTIFLCT-------EPHDKKEDLLEPQEQLPPPPLPPPVSQ 111

>YHS4_CAEEL (O18303) Hypothetical protein ZK849.4 in chromosome I|
          Length = 602

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +2

Query: 179 PPEPFPPASEQHGVQPQDVLRHEVVPRQDP 268
           PP P PPA      QP+  L HEV  + DP
Sbjct: 500 PPPPPPPAEALRADQPRHSLIHEVGAQADP 529

>NFAC3_HUMAN (Q12968) Nuclear factor of activated T-cells, cytoplasmic 3|
           (NF-ATc3) (NFATc3) (T cell transcription factor NFAT4)
           (NF-AT4) (NFATx)
          Length = 1075

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = +3

Query: 63  KHSASRMRVVIFTFVFMLQPQLASRTMRSRKYLPTAALCHRSRFHRPPSSTGCS-PRMCS 239
           K   S+ +   +T V M Q       + S   +P+  + H ++  RP S +GCS   + S
Sbjct: 686 KRKKSQSQRFTYTPVLMKQEHREEIDLSS---VPSLPVPHPAQTQRPSSDSGCSHDSVLS 742

Query: 240 GMKSCLVRIPTT 275
           G +S +  IP T
Sbjct: 743 GQRSLICSIPQT 754

>RIN3_MOUSE (P59729) Ras and Rab interactor 3 (Ras interaction/interference|
            protein 3)
          Length = 980

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = +3

Query: 30   LHRCAKIDPHPKHSASRMRVVIFTFVFMLQPQLASRTMRSRKYLPTAALC 179
            +HR  +     K  ASR  V  F  V  L+P+  SRT+ SR      ALC
Sbjct: 854  IHRWERRRTLNKARASRSSVQDFICVSYLKPEQQSRTLASRADTAAQALC 903

>AMELX_HUMAN (Q99217) Amelogenin, X isoform precursor|
          Length = 191

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +2

Query: 131 EPHDEVAEVLADGGLVPPEPFPPASEQHGVQPQDVLRHE---VVPRQDPDHRRPV 286
           +PH  +  V A   ++P +P  P   QH + P  +  H+     P Q P   +PV
Sbjct: 80  QPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTP--IQHHQPNLPPPAQQPYQPQPV 132

>RIN3_HUMAN (Q8TB24) Ras and Rab interactor 3 (Ras interaction/interference|
            protein 3)
          Length = 984

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +3

Query: 30   LHRCAKIDPHPKHSASRMRVVIFTFVFMLQPQLASRTMRSRKYLPTAALC 179
            +HR  +     K  ASR  V  F  V  L+P+  +RT+ SR      ALC
Sbjct: 857  IHRWERRRTLNKARASRSSVQDFICVSYLEPEQQARTLASRADTQAQALC 906

>HCFC1_MOUSE (Q61191) Host cell factor (HCF) (HCF-1) (C1 factor) [Contains: HCF|
            N-terminal chain 1; HCF N-terminal chain 2; HCF
            N-terminal chain 3; HCF N-terminal chain 4; HCF
            N-terminal chain 5; HCF N-terminal chain 6; HCF
            C-terminal chain 1; HCF C-termi
          Length = 2045

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = +3

Query: 117  QPQLASRTMRSRKYLPTAALCHRSRFHRPPSSTGCSPRMCSGMKSCLVRIPTTGDLSHAL 296
            Q Q A    + + +LPT AL      + P   + C   + S + S +  +P+T   S A 
Sbjct: 1709 QLQEAQAQAQQQHHLPTEALAPADSLNDPSIESNCLNELASAVPSTVALLPSTATESLAP 1768

Query: 297  GTT 305
              T
Sbjct: 1769 SNT 1771

>CNG12_ARATH (Q8GWD2) Probable cyclic nucleotide-gated ion channel 12 (Cyclic|
           nucleotide-and calmodulin-regulated ion channel 12)
          Length = 649

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 17/57 (29%), Positives = 26/57 (45%)
 Frame = +2

Query: 32  SQVRKN*SSPQTFCQQNAGGNIYVCFYASAAVGEPHDEVAEVLADGGLVPPEPFPPA 202
           S+ R N + PQ   Q N    +YV  + S A+     + A+  +   + PP P  PA
Sbjct: 585 SKTRDNENIPQG-TQLNLASTLYVSRFVSKALQNRRKDTADCSSSPDMSPPVPHKPA 640

>RPOA_PRRSL (Q04561) Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes:|
            Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1-alpha
            papain-like cysteine proteinase (EC 3.4.22.-)
            (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase
            (EC 3.4.22.-) (PCP
          Length = 3859

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 179  PPEPFPPASEQHGVQPQDVLRHEVVPRQDPDH 274
            PP+P  P  +Q    P D+ + +V P   P H
Sbjct: 1048 PPKPVGPVLDQIVPPPTDIQQEDVTPSDGPPH 1079

>EVX1_HUMAN (P49640) Homeobox even-skipped homolog protein 1 (EVX-1)|
          Length = 407

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 116 SAAVGEPHDEVAEVLADGGLVPPEPFPPASEQHG 217
           S AVG P  E  E +   G + P   PPA+ + G
Sbjct: 28  SEAVGSPLPEPPEKMVPRGCLSPRAVPPATRERG 61

>CAP4_ARATH (Q9SA65) Putative clathrin assembly protein At1g03050|
          Length = 599

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = +2

Query: 140 DEVAEVLADGGLVPPEPFPPASEQHGVQPQDVLRHEVVPRQDPDHRRPVACLGH 301
           +EV E   D   +   P PP  E+  V+P++  + EV+  +  +    +  LG+
Sbjct: 351 EEVNEEQEDMNAIKALPEPPPKEEDDVKPEEEAKEEVIIEKKQEEMGDLLDLGN 404

>LAD1_HUMAN (O00515) Ladinin 1 (Lad-1) (120 kDa linear IgA bullous dermatosis|
           antigen) (97 kDa linear IgA bullous dermatosis antigen)
           (Linear IgA disease antigen homolog) (LadA)
          Length = 517

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 22/58 (37%), Positives = 27/58 (46%)
 Frame = +2

Query: 113 ASAAVGEPHDEVAEVLADGGLVPPEPFPPASEQHGVQPQDVLRHEVVPRQDPDHRRPV 286
           ASA+   P  E AEV        P+P PPAS+      Q +LR     RQ+   RR V
Sbjct: 56  ASASERLPSVEEAEV--------PKPLPPASKDEDEDIQSILR----TRQERRQRRQV 101

>ABI3_MOUSE (Q8BYZ1) ABI gene family member 3 (New molecule including SH3)|
           (Nesh)
          Length = 367

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +3

Query: 135 RTMRSRKYLPTAALCHRSRFHRPPSSTGCSPRMCSGMKSCLVRIPTTGDLS 287
           R   ++K +P  +L   + +HR P +  C   +  G+K    ++  TG LS
Sbjct: 120 RLPSNQKVIPPESLPSLTPYHRKPLNFACLDDIGHGVKDLSTQLSRTGTLS 170

>FAS_BOVIN (Q71SP7) Fatty acid synthase (EC 2.3.1.85) [Includes:|
            [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38);
            [Acyl-carrier-protein] S-malonyltransferase (EC
            2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC
            2.3.1.41); 3-oxoacyl-[acyl-
          Length = 2513

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = +2

Query: 86   GGNIYVCFYASAAVGEPHDEVAEVLA---DGGLV 178
            G N+ VC YA A++G+P   V  ++A   +GG +
Sbjct: 1311 GANLVVCNYALASLGDPATAVGNMVAALKEGGFL 1344

>VASP_MOUSE (P70460) Vasodilator-stimulated phosphoprotein (VASP)|
          Length = 374

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +2

Query: 164 DGGLVPPEPFPPA-SEQHGVQPQDVLRHEVVPRQDPDH 274
           +GG  PP P PPA S Q+G  P+++ +     ++ P+H
Sbjct: 113 EGGGPPPAPAPPAWSAQNGPSPEELEQQ----KRQPEH 146

>BCHB_RHOS4 (Q9Z5D9) Light-independent protochlorophyllide reductase subunit B|
           (EC 1.18.-.-) (LI-POR subunit B) (DPOR subunit B)
          Length = 534

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 7/28 (25%)
 Frame = +2

Query: 140 DEVAEVL-------ADGGLVPPEPFPPA 202
           DE AE L       A+GG +PPE  PPA
Sbjct: 446 DEAAEALPLTGAETAEGGSIPPEAVPPA 473

>KAD_BACTN (Q89ZJ0) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
          Length = 189

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 113 HKNKRKYYHPHSAGRMFGVRINFCAPVKK 27
           +KN++KY H +  G M G+  + C  V K
Sbjct: 160 YKNEKKYQHINGLGTMDGIFADICEAVDK 188


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,922,442
Number of Sequences: 219361
Number of extensions: 917189
Number of successful extensions: 3364
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3359
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)