>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA)
          Length = 1174

 Score =  147 bits (74), Expect = 2e-32
 Identities = 148/170 (87%), Gaps = 7/170 (4%)
 Strand = Plus / Minus

                                                                        
Query: 59   cgtgacaaagagcaa-cagaagaatctaccaccggctacatttcaccttatccccca-ca 116
            |||||||| |||||| ||||||||||||||||| ||| |||||||| |||||||||  ||
Sbjct: 1112 cgtgacaaggagcaaacagaagaatctaccacccgctccatttcacattatcccccctca 1053

                                                                        
Query: 117  ccagtacttatttatcatacagtaca-----gacgcttccatcttccctatctccggtca 171
            |  || ||||||||||||||||||||     |||||  ||||||||||||||||||| | 
Sbjct: 1052 ctggtccttatttatcatacagtacaatacagacgcccccatcttccctatctccggccg 993

                                                              
Query: 172  tcttcctccggcgatcgacgtatacacgggctgtccaatgctagcttgct 221
            ||||||||||||||||||||||||||||| | ||||||||||| ||||||
Sbjct: 992  tcttcctccggcgatcgacgtatacacggacggtccaatgctaccttgct 943



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                         
Query: 244 actacatggagcactcggcggggacgccct 273
           ||||||||||||||||||||||||||||||
Sbjct: 928 actacatggagcactcggcggggacgccct 899

>gb|AY023463.1| Oryza sativa microsatellite MRG5788 containing (TCG)X8, closest to
           marker R11, genomic sequence
          Length = 224

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 247 acatggagcactcggcggggacgccctg 274
           ||||||||||||||||||||||||||||
Sbjct: 82  acatggagcactcggcggggacgccctg 55

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                            
Query: 247      acatggagcactcggcggggacgccctg 274
                ||||||||||||||||||||||||||||
Sbjct: 28773068 acatggagcactcggcggggacgccctg 28773095

>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0028E05
          Length = 157631

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                         
Query: 247   acatggagcactcggcggggacgccctg 274
             ||||||||||||||||||||||||||||
Sbjct: 80843 acatggagcactcggcggggacgccctg 80870

>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full
           insert sequence
          Length = 1253

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 247 acatggagcactcggcggggacgccctg 274
           ||||||||||||||||||||||||||||
Sbjct: 989 acatggagcactcggcggggacgccctg 962

>gb|AF108925.1|AF108925 Mercenaria mercenaria microsatellite Mme277 sequence
          Length = 813

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 222 ggacggacggacggacaagggca 244
           |||||||||||||||||||||||
Sbjct: 625 ggacggacggacggacaagggca 647

>emb|CR391965.8| Zebrafish DNA sequence from clone CH211-124O16 in linkage group 24,
              complete sequence
          Length = 157418

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 106    tatcccccacaccagtactta 126
              |||||||||||||||||||||
Sbjct: 150615 tatcccccacaccagtactta 150635

>emb|Z49556.1|SCYJR056C S.cerevisiae chromosome X reading frame ORF YJR056c
          Length = 4795

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 43   tgagcgtgagcgtgatcgtga 63
            |||||||||||||||||||||
Sbjct: 2631 tgagcgtgagcgtgatcgtga 2611

>gb|L47993.1|YSCORFSAA Saccharomyces cerevisiae ORF genes, complete cds
          Length = 61989

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 43   tgagcgtgagcgtgatcgtga 63
            |||||||||||||||||||||
Sbjct: 6149 tgagcgtgagcgtgatcgtga 6129

>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence
          Length = 781

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 251 ggagcactcggcggggacgccctg 274
           ||||||||||||||||| ||||||
Sbjct: 503 ggagcactcggcggggaagccctg 480

>gb|AC121299.16| Mus musculus chromosome 17, clone RP23-402P8, complete sequence
          Length = 217287

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    gctggacggacggacggaca 238
              ||||||||||||||||||||
Sbjct: 143725 gctggacggacggacggaca 143744

>emb|AL109755.14|HSJ340H11 Human DNA sequence from clone RP3-340H11 on chromosome 6q24.1-24.3
             Contains part of the PLAGL1 gene for pleiomorphic adenoma
             gene-like 1 (PLAG-like 1, LOT1, ZAC, ZAC tumor suppressor)
             and an FK506 binding protein 7 (FKBP7) pseudogene.
             Contains a a CpG island, complete sequence
          Length = 89669

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   tgctggacggacggacggac 237
             ||||||||||||||||||||
Sbjct: 52906 tgctggacggacggacggac 52887

>gb|BC059359.1| Homo sapiens hydatidiform mole associated and imprinted, mRNA (cDNA
           clone IMAGE:30330800)
          Length = 3349

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 tgctggacggacggacggac 237
           ||||||||||||||||||||
Sbjct: 21  tgctggacggacggacggac 40

>emb|BX927294.7| Zebrafish DNA sequence from clone CH211-222I16 in linkage group 13,
             complete sequence
          Length = 104811

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   tggacggacggacggacaag 240
             ||||||||||||||||||||
Sbjct: 27299 tggacggacggacggacaag 27280

>ref|NM_006718.2| Homo sapiens pleiomorphic adenoma gene-like 1 (PLAGL1), transcript
           variant 2, mRNA
          Length = 4816

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 tgctggacggacggacggac 237
           ||||||||||||||||||||
Sbjct: 175 tgctggacggacggacggac 194

>ref|NM_002656.2| Homo sapiens pleiomorphic adenoma gene-like 1 (PLAGL1), transcript
           variant 1, mRNA
          Length = 4354

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 tgctggacggacggacggac 237
           ||||||||||||||||||||
Sbjct: 175 tgctggacggacggacggac 194

>emb|BX571829.7| Zebrafish DNA sequence from clone DKEY-256M7 in linkage group 12,
              complete sequence
          Length = 196942

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     cggctacatttcaccttatc 109
              ||||||||||||||||||||
Sbjct: 174524 cggctacatttcaccttatc 174505

>dbj|AK096331.1| Homo sapiens cDNA FLJ39012 fis, clone NT2RP6000077, highly similar
           to Homo sapiens mRNA for ZAC zinc finger protein
          Length = 3215

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 tgctggacggacggacggac 237
           ||||||||||||||||||||
Sbjct: 143 tgctggacggacggacggac 162

>gb|AF484581.1| Homo sapiens clone 3-4 Wilms tumor CpG island sequence
          Length = 428

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 tgctggacggacggacggac 237
           ||||||||||||||||||||
Sbjct: 185 tgctggacggacggacggac 204

>ref|NR_002768.1| Homo sapiens hydatidiform mole associated and imprinted (HYMAI) on
           chromosome 6
          Length = 5005

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 tgctggacggacggacggac 237
           ||||||||||||||||||||
Sbjct: 489 tgctggacggacggacggac 508

>gb|AC092360.2| Homo sapiens chromosome 5 clone RP11-346B2, complete sequence
          Length = 130737

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    caccagtacttatttatcat 134
              ||||||||||||||||||||
Sbjct: 116528 caccagtacttatttatcat 116547

>ref|XM_945058.1| PREDICTED: Homo sapiens similar to hydatidiform mole associated and
           imprinted (LOC651977), mRNA
          Length = 3335

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 tgctggacggacggacggac 237
           ||||||||||||||||||||
Sbjct: 15  tgctggacggacggacggac 34

>ref|XM_933027.1| PREDICTED: Homo sapiens similar to hydatidiform mole associated and
           imprinted (LOC645648), mRNA
          Length = 3335

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 tgctggacggacggacggac 237
           ||||||||||||||||||||
Sbjct: 15  tgctggacggacggacggac 34

>emb|BX247906.8| Zebrafish DNA sequence from clone DKEY-9O22 in linkage group 24,
             complete sequence
          Length = 213917

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   tggacggacggacggacaag 240
             ||||||||||||||||||||
Sbjct: 89560 tggacggacggacggacaag 89541

>dbj|AB052172.1| Macaca fascicularis brain cDNA, clone:QccE-18211, similar to human
           hypothetical protein FLJ143145, mRNA, AK125135
          Length = 3890

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 135 acagtacagacgcttccatcttcc 158
           |||||||||||| |||||||||||
Sbjct: 790 acagtacagacggttccatcttcc 813

>gb|U72621.4|HSU72621 Homo sapiens lost on transformation LOT1 mRNA, complete cds
          Length = 4833

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 tgctggacggacggacggac 237
           ||||||||||||||||||||
Sbjct: 175 tgctggacggacggacggac 194

>gb|AF241534.1|AF241534 Homo sapiens hydatidiform mole associated and imprinted (HYMAI)
           mRNA, complete sequence
          Length = 5005

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 tgctggacggacggacggac 237
           ||||||||||||||||||||
Sbjct: 489 tgctggacggacggacggac 508

>emb|AJ311395.1|HSA311395 Homo sapiens mRNA for zinc finger protein (ZAC gene), long 5'UTR
           splice variant
          Length = 3663

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 tgctggacggacggacggac 237
           ||||||||||||||||||||
Sbjct: 165 tgctggacggacggacggac 184

>gb|AY106262.1| Zea mays PCO111648 mRNA sequence
          Length = 1257

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 251 ggagcactcggcggggacgccctg 274
           ||||||||||||||||| ||||||
Sbjct: 981 ggagcactcggcggggaagccctg 958

>gb|AY103775.1| Zea mays PCO076979 mRNA sequence
          Length = 1495

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 248  catggagcactcggcgggga 267
            ||||||||||||||||||||
Sbjct: 1027 catggagcactcggcgggga 1008

>emb|AL929082.7| Zebrafish DNA sequence from clone CH211-113P18, complete sequence
          Length = 195316

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   gctggacggacggacggaca 238
             ||||||||||||||||||||
Sbjct: 17026 gctggacggacggacggaca 17045


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,915,324
Number of Sequences: 3902068
Number of extensions: 1915324
Number of successful extensions: 47849
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47765
Number of HSP's gapped (non-prelim): 82
length of query: 291
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 269
effective length of database: 17,147,199,772
effective search space: 4612596738668
effective search space used: 4612596738668
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)