ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet07a07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PROB_PROMP (Q7V1R7) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glut... 30 2.0
2MSN4_YEAST (P33749) Zinc finger protein MSN4 (Multicopy suppress... 29 5.9

>PROB_PROMP (Q7V1R7) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 360

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +2

Query: 35  KNQTSLKNLINEYTFKSIWESSAK-VANTHNWMAHAVNTV 151
           +N+ +L N+ NE    +I+    K V N  +W++HA+ TV
Sbjct: 236 RNENNLINIFNEKKIGTIFHPVDKPVGNKKSWLSHAIKTV 275



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>MSN4_YEAST (P33749) Zinc finger protein MSN4 (Multicopy suppressor of SNF1|
           protein 4)
          Length = 630

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
 Frame = +2

Query: 11  TSLKNIVNKNQTSLKNLIN--EYTFKSIWESSAKVANTHNWMAHAVNTVLLKNTGNLRRV 184
           T+  +  + N  S  N I+  EYTF      S    +       A NT +L  T N    
Sbjct: 37  TTNVSATSSNDNSANNSISSPEYTFGQFSMDSPHRTD-------ATNTPILTATTNTTAN 89

Query: 185 HCLFHGKDTSNRAANWQ 235
           + L + KDT++ A NW+
Sbjct: 90  NSLMNLKDTASLATNWK 106


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,970,540
Number of Sequences: 219361
Number of extensions: 1147229
Number of successful extensions: 2588
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2588
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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