ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet06g09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome 44 0.034
2dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone... 44 0.034
3gb|AC010064.7| Drosophila melanogaster 3L BAC RP98-22I16 (Roswel... 42 0.14
4gb|AC093551.3| Drosophila melanogaster 3L BAC RP98-48C13 (Roswel... 42 0.14
5gb|AE003592.3| Drosophila melanogaster chromosome 3L, section 73... 42 0.14
6gb|AC109627.8| Mus musculus chromosome 16, clone RP24-226M22, co... 40 0.54
7gb|AC113067.8| Mus musculus chromosome 16, clone RP23-264I14, co... 40 0.54
8gb|AC138087.17| Medicago truncatula clone mth2-22p8, complete se... 40 0.54
9gb|AC139601.8| Medicago truncatula clone mth2-8h11, complete seq... 40 0.54
10gb|AC093544.8| Medicago truncatula chloroplast, complete genome,... 40 0.54
11gb|AE015925.1| Chlamydophila caviae GPIC, complete genome 40 0.54
12gb|AC160334.2| Mus musculus BAC clone RP23-37D14 from chromosome... 38 2.1
13emb|CT010435.4| Mouse DNA sequence from clone RP23-445H9 on chro... 38 2.1
14gb|AC159886.2| Mus musculus BAC clone RP24-397P9 from chromosome... 38 2.1
15gb|AC104956.6| Homo sapiens chromosome 18, clone RP11-646H8, com... 38 2.1
16gb|AC025888.8| Homo sapiens chromosome 18, clone RP11-479H18, co... 38 2.1
17dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisu... 38 2.1
18emb|AL731776.7| Mouse DNA sequence from clone RP23-58B9 on chrom... 38 2.1
19ref|XM_637197.1| Dictyostelium discoideum hypothetical protein (... 36 8.4
20gb|AC146418.3| Pan troglodytes BAC clone RP43-30C17 from 7, comp... 36 8.4
21gb|AY442393.1| Staphylococcus aureus SA0110 gene, SA0110-3 allel... 36 8.4
22gb|AY510112.1| Capra hircus type I keratin intermediate filament... 36 8.4
23emb|CR956370.6| Pig DNA sequence from clone CH242-181F19 on chro... 36 8.4
24ref|XM_448552.1| Candida glabrata CBS138, CAGL0K07612g partial mRNA 36 8.4
25gb|AC131671.3| Mus musculus BAC clone RP23-312H8 from chromosome... 36 8.4
26gb|AC113096.12| Mus musculus chromosome 14, clone RP23-312M23, c... 36 8.4
27gb|AC004454.1| Homo sapiens PAC clone RP5-988L12 from 7, complet... 36 8.4
28gb|AC146692.14| Medicago truncatula clone mth2-7n20, complete se... 36 8.4
29emb|AL500527.19| Human DNA sequence from clone RP11-302K17 on ch... 36 8.4
30emb|AL445433.14| Human DNA sequence from clone RP11-234N17 on ch... 36 8.4
31emb|AL359771.27| Human DNA sequence from clone CTA-520D8 on chro... 36 8.4
32gb|CP000087.1| Rickettsia bellii RML369-C, complete genome 36 8.4
33emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA ... 36 8.4
34emb|CR380957.1| Candida glabrata strain CBS138 chromosome K comp... 36 8.4
35emb|CR925780.8| Zebrafish DNA sequence from clone CH211-112B19 i... 36 8.4
36emb|AL645682.14| Mouse DNA sequence from clone RP23-287B22 on ch... 36 8.4
37gb|AC103830.2| Homo sapiens chromosome 8, clone CTD-2563K22, com... 36 8.4
38gb|AC012349.11| Homo sapiens chromosome 8, clone RP11-16M8, comp... 36 8.4
39emb|BX072578.10| Zebrafish DNA sequence from clone CH211-286A10 ... 36 8.4
40gb|AC023464.11| Homo sapiens chromosome 8, clone RP11-436D19, co... 36 8.4
41gb|AC093546.2| Drosophila melanogaster 3L BAC RP98-8G7 (Roswell ... 36 8.4
42gb|AC024301.10| Homo sapiens, clone RP11-686O16, complete sequence 36 8.4
43dbj|AK166305.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cD... 36 8.4
44gb|AC067801.4|AC067801 Homo sapiens chromosome 18, clone RP11-58... 36 8.4
45gb|AC147291.3| Pan troglodytes BAC clone RP43-74J18 from chromos... 36 8.4
46emb|BX649334.5| Zebrafish DNA sequence from clone DKEYP-6A3 in l... 36 8.4
47gb|AC005698.1|AC005698 Genomic sequence for Arabidopsis thaliana... 36 8.4
48gb|AC006965.3|AC006965 Homo sapiens PAC clone RP4-562J12 from Xq... 36 8.4
49gb|AC011000.3|F16P17 Sequence of BAC F16P17 from Arabidopsis tha... 36 8.4
50emb|BX072529.5| Zebrafish DNA sequence from clone DKEY-20D17 in ... 36 8.4
51emb|CT009542.22| Pig DNA sequence from clone CH242-272H8 on chro... 36 8.4
52gb|AC154466.2| Mus musculus BAC clone RP24-148D22 from 14, compl... 36 8.4
53emb|Z35602.1|CER13G10 Caenorhabditis elegans Cosmid R13G10, comp... 36 8.4
54emb|CR788243.8| Zebrafish DNA sequence from clone DKEY-194O9 in ... 36 8.4
55gb|AE003539.3| Drosophila melanogaster chromosome 3L, section 46... 36 8.4
56gb|AC154565.2| Mus musculus BAC clone RP23-403J19 from chromosom... 36 8.4
57emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, ... 36 8.4
58emb|CR847941.14| Zebrafish DNA sequence from clone CH211-275J6 i... 36 8.4
59gb|AC131699.4| Mus musculus BAC clone RP23-440F17 from 1, comple... 36 8.4
60emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 36 8.4
61dbj|AP006712.1| Lotus japonicus genomic DNA, chromosome 2, clone... 36 8.4
62dbj|AP006075.1| Lotus japonicus genomic DNA, chromosome 3, clone... 36 8.4
63gb|L35274.1|CELDPY27H Caenorhabditis elegans chromosome condensa... 36 8.4
64gb|AC167197.6| Mus musculus chromosome 1, clone RP23-62B14, comp... 36 8.4 
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score = 44.1 bits (22), Expect = 0.034
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 6     actttgatttggtattttggtt 27
             ||||||||||||||||||||||
Sbjct: 42534 actttgatttggtattttggtt 42513
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>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b,
             complete sequence
          Length = 66087

 Score = 44.1 bits (22), Expect = 0.034
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 6     actttgatttggtattttggtt 27
             ||||||||||||||||||||||
Sbjct: 52790 actttgatttggtattttggtt 52811
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>gb|AC010064.7| Drosophila melanogaster 3L BAC RP98-22I16 (Roswell Park Cancer
            Institute Drosophila BAC library) complete sequence
          Length = 199396

 Score = 42.1 bits (21), Expect = 0.14
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 8    tttgatttggtattttggtta 28
            |||||||||||||||||||||
Sbjct: 3416 tttgatttggtattttggtta 3396
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>gb|AC093551.3| Drosophila melanogaster 3L BAC RP98-48C13 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 179055

 Score = 42.1 bits (21), Expect = 0.14
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 8      tttgatttggtattttggtta 28
              |||||||||||||||||||||
Sbjct: 150844 tttgatttggtattttggtta 150824
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>gb|AE003592.3| Drosophila melanogaster chromosome 3L, section 73 of 83 of the complete
              sequence
          Length = 323816

 Score = 42.1 bits (21), Expect = 0.14
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 8      tttgatttggtattttggtta 28
              |||||||||||||||||||||
Sbjct: 143724 tttgatttggtattttggtta 143704
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>gb|AC109627.8| Mus musculus chromosome 16, clone RP24-226M22, complete sequence
          Length = 176288

 Score = 40.1 bits (20), Expect = 0.54
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    gtagtgccatgttatgcatg 55
             ||||||||||||||||||||
Sbjct: 19712 gtagtgccatgttatgcatg 19731
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>gb|AC113067.8| Mus musculus chromosome 16, clone RP23-264I14, complete sequence
          Length = 246802

 Score = 40.1 bits (20), Expect = 0.54
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     gtagtgccatgttatgcatg 55
              ||||||||||||||||||||
Sbjct: 121318 gtagtgccatgttatgcatg 121299
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>gb|AC138087.17| Medicago truncatula clone mth2-22p8, complete sequence
          Length = 130194

 Score = 40.1 bits (20), Expect = 0.54
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    actttgatttggtattttgg 25
            ||||||||||||||||||||
Sbjct: 8411 actttgatttggtattttgg 8392
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>gb|AC139601.8| Medicago truncatula clone mth2-8h11, complete sequence
          Length = 126204

 Score = 40.1 bits (20), Expect = 0.54
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     actttgatttggtattttgg 25
             ||||||||||||||||||||
Sbjct: 94700 actttgatttggtattttgg 94719
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>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence
          Length = 124033

 Score = 40.1 bits (20), Expect = 0.54
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     actttgatttggtattttgg 25
             ||||||||||||||||||||
Sbjct: 81483 actttgatttggtattttgg 81502
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>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome
          Length = 1173390

 Score = 40.1 bits (20), Expect = 0.54
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      ataactttgatttggtattt 22
              ||||||||||||||||||||
Sbjct: 336308 ataactttgatttggtattt 336289
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>gb|AC160334.2| Mus musculus BAC clone RP23-37D14 from chromosome 9, complete
            sequence
          Length = 180527

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 12   atttggtattttggttaca 30
            |||||||||||||||||||
Sbjct: 2815 atttggtattttggttaca 2797
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>emb|CT010435.4| Mouse DNA sequence from clone RP23-445H9 on chromosome 12, complete
             sequence
          Length = 183240

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     taactttgatttggtattt 22
             |||||||||||||||||||
Sbjct: 98393 taactttgatttggtattt 98375
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>gb|AC159886.2| Mus musculus BAC clone RP24-397P9 from chromosome 9, complete
            sequence
          Length = 191328

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 12   atttggtattttggttaca 30
            |||||||||||||||||||
Sbjct: 9926 atttggtattttggttaca 9944
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>gb|AC104956.6| Homo sapiens chromosome 18, clone RP11-646H8, complete sequence
          Length = 157587

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 1     ttataactttgatttggtatttt 23
             ||||||||||||| |||||||||
Sbjct: 23864 ttataactttgatctggtatttt 23842
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>gb|AC025888.8| Homo sapiens chromosome 18, clone RP11-479H18, complete sequence
          Length = 178201

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 1      ttataactttgatttggtatttt 23
              ||||||||||||| |||||||||
Sbjct: 174314 ttataactttgatctggtatttt 174292
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>dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA, complete
              sequence
          Length = 640681

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 5      aactttgatttggtatttt 23
              |||||||||||||||||||
Sbjct: 474695 aactttgatttggtatttt 474713
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>emb|AL731776.7| Mouse DNA sequence from clone RP23-58B9 on chromosome X, complete
            sequence
          Length = 237321

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 20   ttttggttacacacaggta 38
            |||||||||||||||||||
Sbjct: 6238 ttttggttacacacaggta 6256
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>ref|XM_637197.1| Dictyostelium discoideum hypothetical protein (DDB0218088), partial
           mRNA
          Length = 4023

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 2   tataactttgatttggta 19
           ||||||||||||||||||
Sbjct: 619 tataactttgatttggta 602
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>gb|AC146418.3| Pan troglodytes BAC clone RP43-30C17 from 7, complete sequence
          Length = 173505

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 6     actttgatttggtatttt 23
             ||||||||||||||||||
Sbjct: 29875 actttgatttggtatttt 29858
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>gb|AY442393.1| Staphylococcus aureus SA0110 gene, SA0110-3 allele, complete
           sequence
          Length = 491

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 10  tgatttggtattttggtt 27
           ||||||||||||||||||
Sbjct: 310 tgatttggtattttggtt 327
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>gb|AY510112.1| Capra hircus type I keratin intermediate filament C29 mRNA, complete
            cds
          Length = 1621

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 3    ataactttgatttggtattttg 24
            |||||||||||||| |||||||
Sbjct: 1483 ataactttgatttgatattttg 1462
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>emb|CR956370.6| Pig DNA sequence from clone CH242-181F19 on chromosome 7, complete
              sequence
          Length = 178646

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 1      ttataactttgatttggt 18
              ||||||||||||||||||
Sbjct: 176723 ttataactttgatttggt 176706
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>ref|XM_448552.1| Candida glabrata CBS138, CAGL0K07612g partial mRNA
          Length = 735

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 5   aactttgatttggtattt 22
           ||||||||||||||||||
Sbjct: 385 aactttgatttggtattt 402
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>gb|AC131671.3| Mus musculus BAC clone RP23-312H8 from chromosome 3, complete sequence
          Length = 195851

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 14     ttggtattttggttacac 31
              ||||||||||||||||||
Sbjct: 125784 ttggtattttggttacac 125767
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>gb|AC113096.12| Mus musculus chromosome 14, clone RP23-312M23, complete sequence
          Length = 224556

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 7      ctttgatttggtattttg 24
              ||||||||||||||||||
Sbjct: 165324 ctttgatttggtattttg 165341
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>gb|AC004454.1| Homo sapiens PAC clone RP5-988L12 from 7, complete sequence
          Length = 80514

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 6     actttgatttggtatttt 23
             ||||||||||||||||||
Sbjct: 56336 actttgatttggtatttt 56319
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>gb|AC146692.14| Medicago truncatula clone mth2-7n20, complete sequence
          Length = 108084

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 10    tgatttggtattttggtt 27
             ||||||||||||||||||
Sbjct: 92256 tgatttggtattttggtt 92273
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>emb|AL500527.19| Human DNA sequence from clone RP11-302K17 on chromosome 10 Contains the
              gene for  Hermansky-Pudlak syndrome-6 protein (HPS6), two
              pseudogenes for  transcription elongation factor B (SIII),
              polypeptide 1, the LDB1 gene for LIM domain binding 1, a
              novel gene (KIAA0595), the NOLC1 gene for nucleolar and
              coiled-body phosphoprotein 1 and five CpG islands, complete
              sequence
          Length = 158434

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 4      taactttgatttggtatt 21
              ||||||||||||||||||
Sbjct: 141040 taactttgatttggtatt 141057
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>emb|AL445433.14| Human DNA sequence from clone RP11-234N17 on chromosome 1 Contains the
             5' end of the gene for a novel protein, part of a novel
             gene (FLJ38225) and a ribosomal protein L5 (RPL5)
             pseudogene, complete sequence
          Length = 138918

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 12    atttggtattttggttac 29
             ||||||||||||||||||
Sbjct: 12986 atttggtattttggttac 12969
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>emb|AL359771.27| Human DNA sequence from clone CTA-520D8 on chromosome 1 Contains the 3'
             end of the gene for lung type-I cell membrane-associated
             glycoprotein (T1A-2), a novel gene, the 5' end of the
             PRDM2 gene for PR domain containing 2 with ZNF domain and
             a CpG island, complete sequence
          Length = 111182

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 8     tttgatttggtattttgg 25
             ||||||||||||||||||
Sbjct: 70548 tttgatttggtattttgg 70565
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>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 12     atttggtattttggttacacac 33
              |||||||||| |||||||||||
Sbjct: 993019 atttggtattatggttacacac 993040
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>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2
          Length = 202860

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 16     ggtattttggttacacac 33
              ||||||||||||||||||
Sbjct: 118606 ggtattttggttacacac 118623
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>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence
          Length = 1302002

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 5      aactttgatttggtattt 22
              ||||||||||||||||||
Sbjct: 752957 aactttgatttggtattt 752974
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>emb|CR925780.8| Zebrafish DNA sequence from clone CH211-112B19 in linkage group 5,
             complete sequence
          Length = 166407

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 8     tttgatttggtattttgg 25
             ||||||||||||||||||
Sbjct: 63053 tttgatttggtattttgg 63036
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>emb|AL645682.14| Mouse DNA sequence from clone RP23-287B22 on chromosome 11 Contains a
             CpG island, complete sequence
          Length = 198340

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 2     tataactttgatttggtatttt 23
             ||||||||| ||||||||||||
Sbjct: 78695 tataactttcatttggtatttt 78674
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>gb|AC103830.2| Homo sapiens chromosome 8, clone CTD-2563K22, complete sequence
          Length = 191525

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 20   ttttggttacacacaggt 37
            ||||||||||||||||||
Sbjct: 5892 ttttggttacacacaggt 5875
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>gb|AC012349.11| Homo sapiens chromosome 8, clone RP11-16M8, complete sequence
          Length = 118405

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 6     actttgatttggtattttggtt 27
             ||||||||||||| ||||||||
Sbjct: 77287 actttgatttggtgttttggtt 77266
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>emb|BX072578.10| Zebrafish DNA sequence from clone CH211-286A10 in linkage group 5,
              complete sequence
          Length = 183498

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 8      tttgatttggtattttgg 25
              ||||||||||||||||||
Sbjct: 179031 tttgatttggtattttgg 179014
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>gb|AC023464.11| Homo sapiens chromosome 8, clone RP11-436D19, complete sequence
          Length = 160370

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 6      actttgatttggtattttggtt 27
              ||||||||||||| ||||||||
Sbjct: 151624 actttgatttggtgttttggtt 151645
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>gb|AC093546.2| Drosophila melanogaster 3L BAC RP98-8G7 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 207761

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 4      taactttgatttggtatt 21
              ||||||||||||||||||
Sbjct: 171314 taactttgatttggtatt 171331
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>gb|AC024301.10| Homo sapiens, clone RP11-686O16, complete sequence
          Length = 195269

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 17    gtattttggttacacaca 34
             ||||||||||||||||||
Sbjct: 75372 gtattttggttacacaca 75389
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>dbj|AK166305.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length
            enriched library, clone:G830034A04 product:FSH primary
            response 1, full insert sequence
          Length = 3301

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 17   gtattttggttacacaca 34
            ||||||||||||||||||
Sbjct: 1680 gtattttggttacacaca 1697
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>gb|AC067801.4|AC067801 Homo sapiens chromosome 18, clone RP11-583B12, complete sequence
          Length = 174938

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 17    gtattttggttacacaca 34
             ||||||||||||||||||
Sbjct: 58973 gtattttggttacacaca 58990
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>gb|AC147291.3| Pan troglodytes BAC clone RP43-74J18 from chromosome 7, complete sequence
          Length = 219031

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 6      actttgatttggtatttt 23
              ||||||||||||||||||
Sbjct: 122129 actttgatttggtatttt 122112
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>emb|BX649334.5| Zebrafish DNA sequence from clone DKEYP-6A3 in linkage group 22, complete
              sequence
          Length = 184977

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 6      actttgatttggtatttt 23
              ||||||||||||||||||
Sbjct: 150720 actttgatttggtatttt 150703
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>gb|AC005698.1|AC005698 Genomic sequence for Arabidopsis thaliana BAC T3P18 from Chromosome 1,
             complete sequence
          Length = 97054

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 10    tgatttggtattttggtt 27
             ||||||||||||||||||
Sbjct: 48770 tgatttggtattttggtt 48787
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>gb|AC006965.3|AC006965 Homo sapiens PAC clone RP4-562J12 from Xq23, complete sequence
          Length = 132068

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 4     taactttgatttggtatt 21
             ||||||||||||||||||
Sbjct: 46633 taactttgatttggtatt 46650
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>gb|AC011000.3|F16P17 Sequence of BAC F16P17 from Arabidopsis thaliana chromosome 1,
            complete sequence
          Length = 98412

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 9    ttgatttggtattttggt 26
            ||||||||||||||||||
Sbjct: 6579 ttgatttggtattttggt 6562
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>emb|BX072529.5| Zebrafish DNA sequence from clone DKEY-20D17 in linkage group 7, complete
              sequence
          Length = 223845

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 11     gatttggtattttggtta 28
              ||||||||||||||||||
Sbjct: 104325 gatttggtattttggtta 104308
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>emb|CT009542.22| Pig DNA sequence from clone CH242-272H8 on chromosome 7, complete
              sequence
          Length = 177899

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 1      ttataactttgatttggt 18
              ||||||||||||||||||
Sbjct: 177823 ttataactttgatttggt 177840
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>gb|AC154466.2| Mus musculus BAC clone RP24-148D22 from 14, complete sequence
          Length = 149772

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 7     ctttgatttggtattttg 24
             ||||||||||||||||||
Sbjct: 82628 ctttgatttggtattttg 82611
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>emb|Z35602.1|CER13G10 Caenorhabditis elegans Cosmid R13G10, complete sequence
          Length = 18400

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 6    actttgatttggtatttt 23
            ||||||||||||||||||
Sbjct: 3832 actttgatttggtatttt 3849
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>emb|CR788243.8| Zebrafish DNA sequence from clone DKEY-194O9 in linkage group 7, complete
              sequence
          Length = 113842

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 11     gatttggtattttggtta 28
              ||||||||||||||||||
Sbjct: 100350 gatttggtattttggtta 100333
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>gb|AE003539.3| Drosophila melanogaster chromosome 3L, section 46 of 83 of the complete
              sequence
          Length = 272016

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 4      taactttgatttggtatt 21
              ||||||||||||||||||
Sbjct: 199248 taactttgatttggtatt 199265
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>gb|AC154565.2| Mus musculus BAC clone RP23-403J19 from chromosome 16, complete
             sequence
          Length = 202981

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 9     ttgatttggtattttggt 26
             ||||||||||||||||||
Sbjct: 59745 ttgatttggtattttggt 59762
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>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40
          Length = 197405

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 16    ggtattttggttacacac 33
             ||||||||||||||||||
Sbjct: 64060 ggtattttggttacacac 64077
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>emb|CR847941.14| Zebrafish DNA sequence from clone CH211-275J6 in linkage group 5,
             complete sequence
          Length = 151835

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 8     tttgatttggtattttgg 25
             ||||||||||||||||||
Sbjct: 84650 tttgatttggtattttgg 84633



 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 8     tttgatttggtattttgg 25
             ||||||||||||||||||
Sbjct: 79263 tttgatttggtattttgg 79246
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>gb|AC131699.4| Mus musculus BAC clone RP23-440F17 from 1, complete sequence
          Length = 200544

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 5      aactttgatttggtattt 22
              ||||||||||||||||||
Sbjct: 112259 aactttgatttggtattt 112276
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 27      tacacacaggtagtgccatgtt 48
               |||| |||||||||||||||||
Sbjct: 2366132 tacatacaggtagtgccatgtt 2366111
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>dbj|AP006712.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17E09, TM0627,
              complete sequence
          Length = 101220

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 8      tttgatttggtattttgg 25
              ||||||||||||||||||
Sbjct: 100739 tttgatttggtattttgg 100722
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>dbj|AP006075.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT46K10, TM0112,
             complete sequence
          Length = 103522

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 8     tttgatttggtattttgg 25
             ||||||||||||||||||
Sbjct: 94485 tttgatttggtattttgg 94468
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>gb|L35274.1|CELDPY27H Caenorhabditis elegans chromosome condensation protein homolog
            (dpy-27) gene exons 1-12, complete cds
          Length = 8238

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 6    actttgatttggtatttt 23
            ||||||||||||||||||
Sbjct: 7861 actttgatttggtatttt 7844
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>gb|AC167197.6| Mus musculus chromosome 1, clone RP23-62B14, complete sequence
          Length = 220763

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 5     aactttgatttggtattt 22
             ||||||||||||||||||
Sbjct: 94780 aactttgatttggtattt 94797


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 544,242
Number of Sequences: 3902068
Number of extensions: 544242
Number of successful extensions: 35016
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34891
Number of HSP's gapped (non-prelim): 125
length of query: 59
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 38
effective length of database: 17,151,101,840
effective search space: 651741869920
effective search space used: 651741869920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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