ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet06e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ANGL6_MOUSE (Q8R0Z6) Angiopoietin-related protein 6 precursor (A... 28 5.5
2WDR22_HUMAN (Q96JK2) WD-repeat protein 22 (Breakpoint cluster re... 28 5.5

>ANGL6_MOUSE (Q8R0Z6) Angiopoietin-related protein 6 precursor|
           (Angiopoietin-like 6) (Angiopoietin-related growth
           factor)
          Length = 457

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
 Frame = -1

Query: 345 HGRLHSLRQEGAKQHKKPR*YLRGPTCRWLCWGDCTE-----EWPSG 220
           H R  SLRQ+G      P  +L  PT     W DC E      W SG
Sbjct: 213 HQREQSLRQQGPPSSLLPTGHLAVPTRPVGPWRDCAEAHGAGHWQSG 259



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>WDR22_HUMAN (Q96JK2) WD-repeat protein 22 (Breakpoint cluster region protein 2)|
           (BCRP2)
          Length = 942

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +1

Query: 145 FSNEMNEYIHFPSYSYDMYSYRICTS*WPFFSAVAPAEPAAGWSSEVSSGLFML 306
           F+ + ++YI   S  +++Y +RI            PA+P AG    V +G FM+
Sbjct: 287 FAGDRDQYILSGSDDFNLYMWRI------------PADPEAGGIGRVVNGAFMV 328


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,752,815
Number of Sequences: 219361
Number of extensions: 1029106
Number of successful extensions: 1908
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1908
length of database: 80,573,946
effective HSP length: 95
effective length of database: 59,734,651
effective search space used: 1433631624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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