ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet06e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187664.1| Oryza sativa (japonica cultivar-group), predic... 170 2e-39
2dbj|AK068057.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 2e-39
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 163 5e-37
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 163 5e-37
5gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome... 163 5e-37
6gb|AY108960.1| Zea mays PCO105999 mRNA sequence 133 4e-28
7ref|XM_479184.1| Oryza sativa (japonica cultivar-group), mRNA 54 3e-04
8ref|XM_506479.1| PREDICTED Oryza sativa (japonica cultivar-group... 54 3e-04
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
10dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
11dbj|AK071567.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
12dbj|AK059824.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
13ref|XM_450931.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.020
14dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.020
15dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.020
16dbj|AK102696.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.020
17ref|NM_001036493.1| Arabidopsis thaliana unknown protein AT4G016... 46 0.079
18ref|NM_116391.2| Arabidopsis thaliana unknown protein AT4G01600 ... 46 0.079
19gb|BT015662.1| Arabidopsis thaliana At4g01600 gene, complete cds 46 0.079
20gb|BT015153.1| Arabidopsis thaliana At4g01600 gene, complete cds 46 0.079
21emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, c... 46 0.079
22gb|AC154805.2| Mus musculus BAC clone RP24-511O23 from chromosom... 46 0.079
23emb|BX828805.1|CNS0A2AG Arabidopsis thaliana Full-length cDNA Co... 46 0.079
24gb|AF104919.1|T15B16 Arabidopsis thaliana BAC T15B16 46 0.079
25ref|NM_201781.1| Arabidopsis thaliana unknown protein AT2G22475 ... 42 1.2
26ref|NM_127813.2| Arabidopsis thaliana unknown protein AT2G22475 ... 42 1.2
27gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence 42 1.2
28ref|XM_365412.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.2
29gb|AC006592.6| Arabidopsis thaliana chromosome 2 clone F14M13 ma... 42 1.2
30emb|BX819558.1|CNS0A90C Arabidopsis thaliana Full-length cDNA Co... 42 1.2
31gb|AY087182.1| Arabidopsis thaliana clone 32573 mRNA, complete s... 42 1.2
32dbj|AK118552.1| Arabidopsis thaliana At2g22475 mRNA for unknown ... 42 1.2
33gb|AY775040.1| Nicotiana tabacum Avr9/Cf-9 rapidly elicited prot... 40 4.9
34gb|BT018477.1| Zea mays clone EL01N0423H08.d mRNA sequence 40 4.9
35emb|AL139260.19| Human DNA sequence from clone RP5-864K19 on chr... 40 4.9
36gb|AC040934.15| Homo sapiens chromosome 17, clone CTD-2026D20, c... 40 4.9
37gb|AC068234.8| Homo sapiens chromosome 17, clone RP11-290H9, com... 40 4.9
38emb|BX842103.1|CNS09Y93 Arabidopsis thaliana Full-length cDNA Co... 40 4.9
39dbj|AP004475.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 4.9 
>ref|NM_187664.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 795

 Score =  170 bits (86), Expect = 2e-39
 Identities = 164/190 (86%)
 Strand = Plus / Minus

                                                                       
Query: 172 gcctcctggagtgcttcctgcaggtgctttacagcattgtcgtagtacacaaagcccatg 231
           |||||||| |||||||||||||| | |||||| ||  |||| |||||||| |||||||||
Sbjct: 776 gcctcctgaagtgcttcctgcagattctttacggcgctgtcatagtacacgaagcccatg 717

                                                                       
Query: 232 aaccaaaactcgtgattatcgacagagaccacctggatgtatttctcagctgcgtttgtt 291
           ||||| ||||| |||||||| || || |||||||||||||||||||||| ||| ||||||
Sbjct: 716 aaccagaactcatgattatcaacggaaaccacctggatgtatttctcagatgcatttgtt 657

                                                                       
Query: 292 ctgctcgttgaaggattaactgacctcagctgggctagcgggatggcaaccttgtaatag 351
           ||||||||||||||||| ||||| ||||| ||||   | || ||| ||||||| || |||
Sbjct: 656 ctgctcgttgaaggattcactgatctcagttgggtgtggggaatgacaaccttatagtag 597

                     
Query: 352 ctccactcat 361
           ||||||||||
Sbjct: 596 ctccactcat 587
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>dbj|AK068057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130C18, full
           insert sequence
          Length = 1136

 Score =  170 bits (86), Expect = 2e-39
 Identities = 164/190 (86%)
 Strand = Plus / Minus

                                                                       
Query: 172 gcctcctggagtgcttcctgcaggtgctttacagcattgtcgtagtacacaaagcccatg 231
           |||||||| |||||||||||||| | |||||| ||  |||| |||||||| |||||||||
Sbjct: 927 gcctcctgaagtgcttcctgcagattctttacggcgctgtcatagtacacgaagcccatg 868

                                                                       
Query: 232 aaccaaaactcgtgattatcgacagagaccacctggatgtatttctcagctgcgtttgtt 291
           ||||| ||||| |||||||| || || |||||||||||||||||||||| ||| ||||||
Sbjct: 867 aaccagaactcatgattatcaacggaaaccacctggatgtatttctcagatgcatttgtt 808

                                                                       
Query: 292 ctgctcgttgaaggattaactgacctcagctgggctagcgggatggcaaccttgtaatag 351
           ||||||||||||||||| ||||| ||||| ||||   | || ||| ||||||| || |||
Sbjct: 807 ctgctcgttgaaggattcactgatctcagttgggtgtggggaatgacaaccttatagtag 748

                     
Query: 352 ctccactcat 361
           ||||||||||
Sbjct: 747 ctccactcat 738
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  163 bits (82), Expect = 5e-37
 Identities = 136/154 (88%)
 Strand = Plus / Minus

                                                                           
Query: 172     gcctcctggagtgcttcctgcaggtgctttacagcattgtcgtagtacacaaagcccatg 231
               |||||||| |||||||||||||| | |||||| ||  |||| |||||||| |||||||||
Sbjct: 4576261 gcctcctgaagtgcttcctgcagattctttacggcgctgtcatagtacacgaagcccatg 4576202

                                                                           
Query: 232     aaccaaaactcgtgattatcgacagagaccacctggatgtatttctcagctgcgtttgtt 291
               ||||| ||||| |||||||| || || |||||||||||||||||||||| ||| ||||||
Sbjct: 4576201 aaccagaactcatgattatcaacggaaaccacctggatgtatttctcagatgcatttgtt 4576142

                                                 
Query: 292     ctgctcgttgaaggattaactgacctcagctggg 325
               ||||||||||||||||| ||||| ||||| ||||
Sbjct: 4576141 ctgctcgttgaaggattcactgatctcagttggg 4576108
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  163 bits (82), Expect = 5e-37
 Identities = 136/154 (88%)
 Strand = Plus / Minus

                                                                           
Query: 172     gcctcctggagtgcttcctgcaggtgctttacagcattgtcgtagtacacaaagcccatg 231
               |||||||| |||||||||||||| | |||||| ||  |||| |||||||| |||||||||
Sbjct: 4576376 gcctcctgaagtgcttcctgcagattctttacggcgctgtcatagtacacgaagcccatg 4576317

                                                                           
Query: 232     aaccaaaactcgtgattatcgacagagaccacctggatgtatttctcagctgcgtttgtt 291
               ||||| ||||| |||||||| || || |||||||||||||||||||||| ||| ||||||
Sbjct: 4576316 aaccagaactcatgattatcaacggaaaccacctggatgtatttctcagatgcatttgtt 4576257

                                                 
Query: 292     ctgctcgttgaaggattaactgacctcagctggg 325
               ||||||||||||||||| ||||| ||||| ||||
Sbjct: 4576256 ctgctcgttgaaggattcactgatctcagttggg 4576223
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>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09,
             complete sequence
          Length = 148894

 Score =  163 bits (82), Expect = 5e-37
 Identities = 136/154 (88%)
 Strand = Plus / Minus

                                                                         
Query: 172   gcctcctggagtgcttcctgcaggtgctttacagcattgtcgtagtacacaaagcccatg 231
             |||||||| |||||||||||||| | |||||| ||  |||| |||||||| |||||||||
Sbjct: 17216 gcctcctgaagtgcttcctgcagattctttacggcgctgtcatagtacacgaagcccatg 17157

                                                                         
Query: 232   aaccaaaactcgtgattatcgacagagaccacctggatgtatttctcagctgcgtttgtt 291
             ||||| ||||| |||||||| || || |||||||||||||||||||||| ||| ||||||
Sbjct: 17156 aaccagaactcatgattatcaacggaaaccacctggatgtatttctcagatgcatttgtt 17097

                                               
Query: 292   ctgctcgttgaaggattaactgacctcagctggg 325
             ||||||||||||||||| ||||| ||||| ||||
Sbjct: 17096 ctgctcgttgaaggattcactgatctcagttggg 17063
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>gb|AY108960.1| Zea mays PCO105999 mRNA sequence
          Length = 1111

 Score =  133 bits (67), Expect = 4e-28
 Identities = 218/267 (81%), Gaps = 1/267 (0%)
 Strand = Plus / Minus

                                                                       
Query: 100 agtataccacaactgta-tgtataatgcatgctagtccaaacctatagacatcactaagc 158
           |||||| |||||||||| |||||||  ||||||||| | || | ||  ||||||||||||
Sbjct: 937 agtatatcacaactgtaatgtataagacatgctagttccaatccatgaacatcactaagc 878

                                                                       
Query: 159 ttgcaaaatacgggcctcctggagtgcttcctgcaggtgctttacagcattgtcgtagta 218
             | ||| |  | |||||||| |||||||||||||| | ||| || ||| |||| |||||
Sbjct: 877 acgtaaattctgagcctcctgaagtgcttcctgcagattcttcaccgcactgtcatagta 818

                                                                       
Query: 219 cacaaagcccatgaaccaaaactcgtgattatcgacagagaccacctggatgtatttctc 278
            || |||||||| ||||||||||| || ||||| ||||| |||||||| |||||||||||
Sbjct: 817 aacgaagcccataaaccaaaactcatggttatcaacagaaaccacctgaatgtatttctc 758

                                                                       
Query: 279 agctgcgtttgttctgctcgttgaaggattaactgacctcagctgggctagcgggatggc 338
            ||||| ||||||||||| ||||| | ||||| ||| | ||| || || || |||||| |
Sbjct: 757 tgctgcatttgttctgcttgttgatgaattaattgatcgcagttgagcaagggggatgac 698

                                      
Query: 339 aaccttgtaatagctccactcattttt 365
            |||||||| || ||||||||| ||||
Sbjct: 697 caccttgtagtaactccactcagtttt 671
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>ref|XM_479184.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1000

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 210 gtcgtagtacacaaagcccatgaaccaaaactcgtgattatcgacagagaccacctggat 269
           ||||||||  || |||||||||||||| || || || || |||||||| |||||||||||
Sbjct: 690 gtcgtagttgacgaagcccatgaaccagaagtcatggttgtcgacagaaaccacctggat 631

              
Query: 270 gta 272
           |||
Sbjct: 630 gta 628
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>ref|XM_506479.1| PREDICTED Oryza sativa (japonica cultivar-group), P0594D10.123 mRNA
          Length = 1055

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 210 gtcgtagtacacaaagcccatgaaccaaaactcgtgattatcgacagagaccacctggat 269
           ||||||||  || |||||||||||||| || || || || |||||||| |||||||||||
Sbjct: 746 gtcgtagttgacgaagcccatgaaccagaagtcatggttgtcgacagaaaccacctggat 687

              
Query: 270 gta 272
           |||
Sbjct: 686 gta 684
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                            
Query: 210      gtcgtagtacacaaagcccatgaaccaaaactcgtgattatcgacagagaccacctggat 269
                ||||||||  || |||||||||||||| || || || || |||||||| |||||||||||
Sbjct: 25625913 gtcgtagttgacgaagcccatgaaccagaagtcatggttgtcgacagaaaccacctggat 25625854

                   
Query: 270      gta 272
                |||
Sbjct: 25625853 gta 25625851
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>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0594D10
          Length = 143200

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                         
Query: 210   gtcgtagtacacaaagcccatgaaccaaaactcgtgattatcgacagagaccacctggat 269
             ||||||||  || |||||||||||||| || || || || |||||||| |||||||||||
Sbjct: 79886 gtcgtagttgacgaagcccatgaaccagaagtcatggttgtcgacagaaaccacctggat 79827

                
Query: 270   gta 272
             |||
Sbjct: 79826 gta 79824
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>dbj|AK071567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100G12, full
           insert sequence
          Length = 1055

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 210 gtcgtagtacacaaagcccatgaaccaaaactcgtgattatcgacagagaccacctggat 269
           ||||||||  || |||||||||||||| || || || || |||||||| |||||||||||
Sbjct: 746 gtcgtagttgacgaagcccatgaaccagaagtcatggttgtcgacagaaaccacctggat 687

              
Query: 270 gta 272
           |||
Sbjct: 686 gta 684
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>dbj|AK059824.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-E06, full
           insert sequence
          Length = 1000

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 210 gtcgtagtacacaaagcccatgaaccaaaactcgtgattatcgacagagaccacctggat 269
           ||||||||  || |||||||||||||| || || || || |||||||| |||||||||||
Sbjct: 690 gtcgtagttgacgaagcccatgaaccagaagtcatggttgtcgacagaaaccacctggat 631

              
Query: 270 gta 272
           |||
Sbjct: 630 gta 628
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>ref|XM_450931.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1017

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 187 tcctgcaggtgctttacagcattgtcgtagtacacaaagcccatgaaccaaaactc 242
           ||||||| |||||| || ||  ||||||||| |||||||||||| ||||| |||||
Sbjct: 674 tcctgcaagtgcttgaccgcgctgtcgtagttcacaaagcccatcaaccagaactc 619
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 187      tcctgcaggtgctttacagcattgtcgtagtacacaaagcccatgaaccaaaactc 242
                ||||||| |||||| || ||  ||||||||| |||||||||||| ||||| |||||
Sbjct: 17640492 tcctgcaagtgcttgaccgcgctgtcgtagttcacaaagcccatcaaccagaactc 17640437
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>dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1005_D12
          Length = 150588

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 187   tcctgcaggtgctttacagcattgtcgtagtacacaaagcccatgaaccaaaactc 242
             ||||||| |||||| || ||  ||||||||| |||||||||||| ||||| |||||
Sbjct: 89214 tcctgcaagtgcttgaccgcgctgtcgtagttcacaaagcccatcaaccagaactc 89159
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>dbj|AK102696.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103F22, full
           insert sequence
          Length = 1016

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 187 tcctgcaggtgctttacagcattgtcgtagtacacaaagcccatgaaccaaaactc 242
           ||||||| |||||| || ||  ||||||||| |||||||||||| ||||| |||||
Sbjct: 674 tcctgcaagtgcttgaccgcgctgtcgtagttcacaaagcccatcaaccagaactc 619
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>ref|NM_001036493.1| Arabidopsis thaliana unknown protein AT4G01600 transcript variant
           AT4G01600.2 mRNA, complete cds
          Length = 704

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 220 acaaagcccatgaaccaaaactc 242
           |||||||||||||||||||||||
Sbjct: 619 acaaagcccatgaaccaaaactc 597
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>ref|NM_116391.2| Arabidopsis thaliana unknown protein AT4G01600 transcript variant
           AT4G01600.1 mRNA, complete cds
          Length = 731

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 220 acaaagcccatgaaccaaaactc 242
           |||||||||||||||||||||||
Sbjct: 642 acaaagcccatgaaccaaaactc 620
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>gb|BT015662.1| Arabidopsis thaliana At4g01600 gene, complete cds
          Length = 687

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 220 acaaagcccatgaaccaaaactc 242
           |||||||||||||||||||||||
Sbjct: 617 acaaagcccatgaaccaaaactc 595
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>gb|BT015153.1| Arabidopsis thaliana At4g01600 gene, complete cds
          Length = 704

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 220 acaaagcccatgaaccaaaactc 242
           |||||||||||||||||||||||
Sbjct: 619 acaaagcccatgaaccaaaactc 597
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>emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 4
          Length = 198697

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 220    acaaagcccatgaaccaaaactc 242
              |||||||||||||||||||||||
Sbjct: 116814 acaaagcccatgaaccaaaactc 116792
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>gb|AC154805.2| Mus musculus BAC clone RP24-511O23 from chromosome 14, complete
             sequence
          Length = 151445

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 170   gggcctcctggagtgcttcctgc 192
             |||||||||||||||||||||||
Sbjct: 52270 gggcctcctggagtgcttcctgc 52248
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>emb|BX828805.1|CNS0A2AG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL40ZA05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 724

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 220 acaaagcccatgaaccaaaactc 242
           |||||||||||||||||||||||
Sbjct: 635 acaaagcccatgaaccaaaactc 613
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>gb|AF104919.1|T15B16 Arabidopsis thaliana BAC T15B16
          Length = 90596

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 220   acaaagcccatgaaccaaaactc 242
             |||||||||||||||||||||||
Sbjct: 77159 acaaagcccatgaaccaaaactc 77181
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>ref|NM_201781.1| Arabidopsis thaliana unknown protein AT2G22475 transcript variant
            AT2G22475.2 mRNA, complete cds
          Length = 1636

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 226  cccatgaaccaaaactcgtgattatcgacagagaccacctggatgtatttctc 278
            ||||||||||||||||| ||||| || || || | |||||| ||||| |||||
Sbjct: 1332 cccatgaaccaaaactcatgattgtctaccgaaatcacctgtatgtacttctc 1280
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>ref|NM_127813.2| Arabidopsis thaliana unknown protein AT2G22475 transcript variant
           AT2G22475.1 mRNA, complete cds
          Length = 1254

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 226 cccatgaaccaaaactcgtgattatcgacagagaccacctggatgtatttctc 278
           ||||||||||||||||| ||||| || || || | |||||| ||||| |||||
Sbjct: 949 cccatgaaccaaaactcatgattgtctaccgaaatcacctgtatgtacttctc 897
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>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence
          Length = 78195

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 211   tcgtagtacacaaagcccatgaaccaaaactcgtgattatc 251
             ||||||| ||| || ||||||||||| |||||||| |||||
Sbjct: 77005 tcgtagttcacgaaccccatgaaccagaactcgtggttatc 76965
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>ref|XM_365412.1| Magnaporthe grisea 70-15 hypothetical protein (MG02114.4) partial
            mRNA
          Length = 2439

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 334  atggcaaccttgtaatagctc 354
            |||||||||||||||||||||
Sbjct: 2195 atggcaaccttgtaatagctc 2175
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>gb|AC006592.6| Arabidopsis thaliana chromosome 2 clone F14M13 map mi238, complete
             sequence
          Length = 106949

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                  
Query: 226   cccatgaaccaaaactcgtgattatcgacagagaccacctggatgtatttctc 278
             ||||||||||||||||| ||||| || || || | |||||| ||||| |||||
Sbjct: 49581 cccatgaaccaaaactcatgattgtctaccgaaatcacctgtatgtacttctc 49633
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>emb|BX819558.1|CNS0A90C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB8ZE09 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1500

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 226  cccatgaaccaaaactcgtgattatcgacagagaccacctggatgtatttctc 278
            ||||||||||||||||| ||||| || || || | |||||| ||||| |||||
Sbjct: 1262 cccatgaaccaaaactcatgattgtctaccgaaatcacctgtatgtacttctc 1210
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>gb|AY087182.1| Arabidopsis thaliana clone 32573 mRNA, complete sequence
          Length = 1216

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 226 cccatgaaccaaaactcgtgattatcgacagagaccacctggatgtatttctc 278
           ||||||||||||||||| ||||| || || || | |||||| ||||| |||||
Sbjct: 941 cccatgaaccaaaactcatgattgtctaccgaaatcacctgtatgtacttctc 889
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>dbj|AK118552.1| Arabidopsis thaliana At2g22475 mRNA for unknown protein, complete
           cds, clone: RAFL19-77-O17
          Length = 1217

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 226 cccatgaaccaaaactcgtgattatcgacagagaccacctggatgtatttctc 278
           ||||||||||||||||| ||||| || || || | |||||| ||||| |||||
Sbjct: 949 cccatgaaccaaaactcatgattgtctaccgaaatcacctgtatgtacttctc 897
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>gb|AY775040.1| Nicotiana tabacum Avr9/Cf-9 rapidly elicited protein 140 (ACRE140)
           mRNA, partial cds
          Length = 518

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 acaaagcccatgaaccaaaa 239
           ||||||||||||||||||||
Sbjct: 345 acaaagcccatgaaccaaaa 326
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>gb|BT018477.1| Zea mays clone EL01N0423H08.d mRNA sequence
          Length = 968

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 208 ttgtcgtagtacacaaagcccatgaaccaaaactcgtgattatc 251
           |||||||||| ||| || ||||||||||| |||| ||| |||||
Sbjct: 686 ttgtcgtagttcacgaaccccatgaaccagaactggtggttatc 643
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>emb|AL139260.19| Human DNA sequence from clone RP5-864K19 on chromosome 1p32.3-34.1
             Contains the MYCBP gene for c-myc binding protein, the
             GJA10 gene for gap junction protein alpha 10, the RHBDL2
             gene for rhomboid veinlet-like 2 (Drosophila), a novel
             gene and the RRAGC gene for Ras-related GTP binding C,
             complete sequence
          Length = 155138

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   tggagtgcttcctgcaggtg 197
             ||||||||||||||||||||
Sbjct: 54441 tggagtgcttcctgcaggtg 54422
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>gb|AC040934.15| Homo sapiens chromosome 17, clone CTD-2026D20, complete sequence
          Length = 168194

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   gcccatgaaccaaaactcgt 244
             ||||||||||||||||||||
Sbjct: 13704 gcccatgaaccaaaactcgt 13685
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>gb|AC068234.8| Homo sapiens chromosome 17, clone RP11-290H9, complete sequence
          Length = 174566

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   gcccatgaaccaaaactcgt 244
             ||||||||||||||||||||
Sbjct: 50846 gcccatgaaccaaaactcgt 50865
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>emb|BX842103.1|CNS09Y93 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL9ZA03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1056

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 226 cccatgaaccaaaactcgtgattatcgacaga 257
           ||||||||||||||||| ||||| || |||||
Sbjct: 935 cccatgaaccaaaactcatgattgtctacaga 904
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>dbj|AP004475.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT01I13, TM0010,
             complete sequence
          Length = 87900

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   acaaagcccatgaaccaaaa 239
             ||||||||||||||||||||
Sbjct: 78090 acaaagcccatgaaccaaaa 78071


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,536,848
Number of Sequences: 3902068
Number of extensions: 2536848
Number of successful extensions: 42353
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42252
Number of HSP's gapped (non-prelim): 99
length of query: 365
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 343
effective length of database: 17,147,199,772
effective search space: 5881489521796
effective search space used: 5881489521796
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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