| Clone Name | rbaet06d09 |
|---|---|
| Clone Library Name | barley_pub |
>S27A4_MACFA (Q4R3Y4) Long-chain fatty acid transport protein 4 (EC 6.2.1.-)| (Fatty acid transport protein 4) (FATP-4) (Solute carrier family 27 member 4) Length = 643 Score = 28.9 bits (63), Expect = 3.3 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -2 Query: 299 HLDPFRASAPLRLKTCQERRFSRKIF 222 HLDP AP L +C ++ F+ K+F Sbjct: 217 HLDPLLEDAPKHLPSCPDKGFTDKLF 242
>S27A4_HUMAN (Q6P1M0) Long-chain fatty acid transport protein 4 (EC 6.2.1.-)| (Fatty acid transport protein 4) (FATP-4) (Solute carrier family 27 member 4) Length = 643 Score = 28.9 bits (63), Expect = 3.3 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -2 Query: 299 HLDPFRASAPLRLKTCQERRFSRKIF 222 HLDP AP L +C ++ F+ K+F Sbjct: 217 HLDPLLKDAPKHLPSCPDKGFTDKLF 242
>EDNRB_PIG (P35463) Endothelin B receptor precursor (ET-B) (Endothelin| receptor Non-selective type) Length = 443 Score = 28.1 bits (61), Expect = 5.6 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +3 Query: 84 PKKMEFTGTASG*PARLLTPPPFE 155 P +M G +G PAR LTPPP E Sbjct: 69 PPQMPKGGRMAGPPARTLTPPPCE 92
>S27A4_PONPY (Q5RDY4) Long-chain fatty acid transport protein 4 (EC 6.2.1.-)| (Fatty acid transport protein 4) (FATP-4) (Solute carrier family 27 member 4) Length = 643 Score = 28.1 bits (61), Expect = 5.6 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -2 Query: 299 HLDPFRASAPLRLKTCQERRFSRKIF 222 HLDP AP L C ++ F+ K+F Sbjct: 217 HLDPLLKDAPKHLPICPDKGFTDKLF 242
>CAHC_SPIOL (P16016) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 319 Score = 28.1 bits (61), Expect = 5.6 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = -3 Query: 178 KVEPLTA--HSKGGGVSNLAGYPEAVPVNSIFFGHLQKTSRSSQHLMALYQGN 26 KVE + HS GG+ L +P+A P + F K ++H + GN Sbjct: 201 KVENIVVIGHSACGGIKGLMSFPDAGPTTTDFIEDWVKICLPAKHKVLAEHGN 253
>YJES_ECOLI (P39288) Putative electron transport protein yjeS| Length = 379 Score = 27.3 bits (59), Expect = 9.6 Identities = 26/106 (24%), Positives = 37/106 (34%), Gaps = 13/106 (12%) Frame = +3 Query: 54 CDDLLVFCRWPKKMEFTGTASG*PARLLTPPP----FEWAVRGSTLNTYSSNTPKIIDLR 221 CDD + C W + + T P + L P F W+ T S +I LR Sbjct: 246 CDDCQLICPWNRYSQLTTEEDFSPRKPLHAPELIELFAWSEEKFLKVTEGSAIRRIGHLR 305 Query: 222 ---------EDLPRKPPFLTCFQSQRG*GPKRVQMKTWMKCHQIHR 332 + P LT +S++G P + W QI R Sbjct: 306 WLRNIAVALGNAPWDETILTALESRKGEHPLLDEHIAWAIAQQIER 351
>UCRI_CHRVI (O31214) Ubiquinol-cytochrome c reductase iron-sulfur subunit (EC| 1.10.2.2) (Rieske iron-sulfur protein) (RISP) Length = 207 Score = 27.3 bits (59), Expect = 9.6 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Frame = +3 Query: 156 WAVRGST--LNTYSSNTPKIIDLREDLPRKPPF 248 W V S+ L SSN PK++D ++P++P + Sbjct: 83 WVVHRSSEMLAALSSNDPKLVDPTSEVPQQPDY 115 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,787,215 Number of Sequences: 219361 Number of extensions: 1042069 Number of successful extensions: 2099 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2079 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2099 length of database: 80,573,946 effective HSP length: 89 effective length of database: 61,050,817 effective search space used: 1465219608 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)