>ref|NM_186268.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 717

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 89/106 (83%)
 Strand = Plus / Minus

                                                                       
Query: 242 tatggaggccaattctggtttgtgaaggccttgatacactccatcgtcgatcggaagctg 301
           ||||||||||||| ||| | | ||||||| || ||||||||||| || ||| ||| ||||
Sbjct: 716 tatggaggccaatgctgatctttgaaggcttttatacactccatagtggattggatgctg 657

                                                         
Query: 302 ctggacatgcctttccccagcttgggcagatcaactcctcctgaaa 347
           || |||| ||| ||||||| ||||||||| | ||| ||||||||||
Sbjct: 656 cttgacacgcccttccccaacttgggcaggttaacgcctcctgaaa 611

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 89/106 (83%)
 Strand = Plus / Plus

                                                                           
Query: 242     tatggaggccaattctggtttgtgaaggccttgatacactccatcgtcgatcggaagctg 301
               ||||||||||||| ||| | | ||||||| || ||||||||||| || ||| ||| ||||
Sbjct: 2255343 tatggaggccaatgctgatctttgaaggcttttatacactccatagtggattggatgctg 2255402

                                                             
Query: 302     ctggacatgcctttccccagcttgggcagatcaactcctcctgaaa 347
               || |||| ||| ||||||| ||||||||| | ||| ||||||||||
Sbjct: 2255403 cttgacacgcccttccccaacttgggcaggttaacgcctcctgaaa 2255448

>dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_B12
          Length = 121362

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 89/106 (83%)
 Strand = Plus / Plus

                                                                         
Query: 242   tatggaggccaattctggtttgtgaaggccttgatacactccatcgtcgatcggaagctg 301
             ||||||||||||| ||| | | ||||||| || ||||||||||| || ||| ||| ||||
Sbjct: 29042 tatggaggccaatgctgatctttgaaggcttttatacactccatagtggattggatgctg 29101

                                                           
Query: 302   ctggacatgcctttccccagcttgggcagatcaactcctcctgaaa 347
             || |||| ||| ||||||| ||||||||| | ||| ||||||||||
Sbjct: 29102 cttgacacgcccttccccaacttgggcaggttaacgcctcctgaaa 29147

>gb|AC165282.2| Mus musculus BAC clone RP24-465P22 from chromosome 16, complete
             sequence
          Length = 185134

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 310   gcctttccccagcttgggcag 330
             |||||||||||||||||||||
Sbjct: 57404 gcctttccccagcttgggcag 57424

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 286    cgtcgatcggaagctgctgga 306
              |||||||||||||||||||||
Sbjct: 151567 cgtcgatcggaagctgctgga 151547

>gb|AC011491.7| Homo sapiens chromosome 19 clone CTB-180A7, complete sequence
          Length = 118820

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 299   ctgctggacatgcctttccccagct 323
             |||||||| ||||||||||||||||
Sbjct: 61616 ctgctggaaatgcctttccccagct 61640

>dbj|AB071139.1| Apis mellifera Ks-1 non-coding nuclear RNA
          Length = 17525

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 213   ttgcaatcttcaatttactta 233
             |||||||||||||||||||||
Sbjct: 15252 ttgcaatcttcaatttactta 15272

>gb|AC150242.3| Rhinolophus ferrumequinum clone VMRC7-331J24, complete sequence
          Length = 120894

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    gacatgcctttccccagctt 324
              ||||||||||||||||||||
Sbjct: 115932 gacatgcctttccccagctt 115951

>gb|AC115868.12| Mus musculus chromosome 7, clone RP24-329F21, complete sequence
          Length = 181717

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    tatgtataatgtatctatgt 33
             ||||||||||||||||||||
Sbjct: 30027 tatgtataatgtatctatgt 30008

>gb|AC175237.3| Loxodonta africana clone VMRC15-323E23, complete sequence
          Length = 35488

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   gacatgcctttccccagctt 324
             ||||||||||||||||||||
Sbjct: 28068 gacatgcctttccccagctt 28087

>gb|AC126933.3| Mus musculus BAC clone RP24-117M7 from chromosome 1, complete sequence
          Length = 170885

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   ctggtttgtgaaggccttga 275
             ||||||||||||||||||||
Sbjct: 10499 ctggtttgtgaaggccttga 10518

>emb|AL356785.18| Human DNA sequence from clone RP13-206I21 on chromosome Xp11.3-21.1
             Contains part of the ATP11C gene for ATPase, Class VI,
             type 11C (ATPIG, ATPIQ), complete sequence
          Length = 165572

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   ggctatgatcccaggtgggt 192
             ||||||||||||||||||||
Sbjct: 90012 ggctatgatcccaggtgggt 90031

>emb|AL357873.17| Human DNA sequence from clone RP11-344F13 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 143508

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   tcctgaaacttgaggtttct 359
             ||||||||||||||||||||
Sbjct: 17702 tcctgaaacttgaggtttct 17721

>emb|AL357075.17| Human DNA sequence from clone RP11-486M3 on chromosome 6 Contains the
             gene for similar to maguin-2; maguin-1 (LOC154043,
             FLJ31349) and a novel pseudogene. Contains a CpG island,
             complete sequence
          Length = 178461

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    aatatgtataatgtatctat 31
             ||||||||||||||||||||
Sbjct: 95861 aatatgtataatgtatctat 95880

>gb|AC155227.3| Rhinolophus ferrumequinum clone VMRC7-4K1, complete sequence
          Length = 160979

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   gacatgcctttccccagctt 324
             ||||||||||||||||||||
Sbjct: 64352 gacatgcctttccccagctt 64371

>gb|AC113355.2| Homo sapiens chromosome 5 clone CTD-3007L5, complete sequence
          Length = 130307

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 13    atatgtataatgtatctatgtgtg 36
             |||| |||||||||||||||||||
Sbjct: 62050 atatatataatgtatctatgtgtg 62073

>gb|AC087236.11| Homo sapiens 12 BAC RP11-127B1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 61010

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 13    atatgtataatgtatctatgtgtg 36
             ||||||||||||||| ||||||||
Sbjct: 25396 atatgtataatgtatatatgtgtg 25373

>gb|AE010249.1| Pyrococcus furiosus DSM 3638, section 124 of 173 of the complete
            genome
          Length = 11324

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 178  tgatcccaggtgggtagttt 197
            ||||||||||||||||||||
Sbjct: 8637 tgatcccaggtgggtagttt 8618

>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 305     gacatgcctttccccagctt 324
               ||||||||||||||||||||
Sbjct: 1397020 gacatgcctttccccagctt 1397039

>gb|AC061958.11|AC061958 Homo sapiens chromosome 3 clone RP11-6B7, complete sequence
          Length = 177717

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     aagaaatatgtataatgtat 27
             ||||||||||||||||||||
Sbjct: 57219 aagaaatatgtataatgtat 57238

>emb|BX470246.11| Zebrafish DNA sequence from clone DKEYP-8F4 in linkage group 20,
             complete sequence
          Length = 148286

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     aagaaatatgtataatgtat 27
             ||||||||||||||||||||
Sbjct: 79224 aagaaatatgtataatgtat 79205

>gb|AC132589.4| Mus musculus BAC clone RP24-258M24 from 1, complete sequence
          Length = 168097

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    ctggtttgtgaaggccttga 275
              ||||||||||||||||||||
Sbjct: 148058 ctggtttgtgaaggccttga 148077

>gb|AC167525.3| Loxodonta africana clone VMRC15-570H6, complete sequence
          Length = 29123

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  gacatgcctttccccagctt 324
            ||||||||||||||||||||
Sbjct: 2669 gacatgcctttccccagctt 2688

>emb|AL714023.12| Mouse DNA sequence from clone RP23-12H6 on chromosome 2, complete
              sequence
          Length = 211570

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 18     tataatgtatctatgtgtgccatg 41
              |||||||||| |||||||||||||
Sbjct: 189073 tataatgtatatatgtgtgccatg 189096


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,503,910
Number of Sequences: 3902068
Number of extensions: 2503910
Number of successful extensions: 45436
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45391
Number of HSP's gapped (non-prelim): 45
length of query: 363
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 341
effective length of database: 17,147,199,772
effective search space: 5847195122252
effective search space used: 5847195122252
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)