| Clone Name | rbaet06d05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SMSR2_CAEEL (Q9TYV2) Sphingomyelin synthase-related 2 | 28 | 7.5 | 2 | CYB_TRYBB (P00164) Cytochrome b | 27 | 9.8 | 3 | CYB_LEITA (P14548) Cytochrome b | 27 | 9.8 |
|---|
>SMSR2_CAEEL (Q9TYV2) Sphingomyelin synthase-related 2| Length = 381 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -1 Query: 276 LLVILIFPVMLMITRCFTWIVIRRV 202 ++++LI +++M T WIVIRRV Sbjct: 161 MMILLISALLVMFTHQHRWIVIRRV 185
>CYB_TRYBB (P00164) Cytochrome b| Length = 363 Score = 27.3 bits (59), Expect = 9.8 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -1 Query: 276 LLVILIFPVMLMITRCFTWIVIRRVEL 196 L+VIL+F + L I C W V R L Sbjct: 288 LMVILLFSLFLFILNCILWFVYCRSSL 314
>CYB_LEITA (P14548) Cytochrome b| Length = 371 Score = 27.3 bits (59), Expect = 9.8 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -1 Query: 276 LLVILIFPVMLMITRCFTWIVIRRVEL 196 L+VIL+F + L I C W V R L Sbjct: 296 LMVILLFSLFLFILNCILWFVYCRSSL 322 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,476,702 Number of Sequences: 219361 Number of extensions: 727296 Number of successful extensions: 1467 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1447 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1467 length of database: 80,573,946 effective HSP length: 84 effective length of database: 62,147,622 effective search space used: 1491542928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)