ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet06d02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RMT2_ASPFU (Q4X1R1) Arginine N-methyltransferase 2 (EC 2.1.1.-) 30 1.6
2YHV5_YEAST (P38851) Hypothetical 143.6 kDa protein in SPO16-REC1... 29 2.7
3ZYGBL_MOUSE (Q80ZJ6) Zyg-11 protein homolog (Zyg-11 homolog B-like) 28 7.9
4ZYGBL_PONPY (Q5RAG3) Zyg-11 protein homolog (Zyg-11 homolog B-like) 28 7.9
5ZYGBL_HUMAN (Q7Z7L7) Zyg-11 protein homolog (Zyg-11 homolog B-like) 28 7.9
6RMT2_EMENI (Q5B058) Arginine N-methyltransferase 2 (EC 2.1.1.-) 28 7.9

>RMT2_ASPFU (Q4X1R1) Arginine N-methyltransferase 2 (EC 2.1.1.-)|
          Length = 424

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = +3

Query: 3   QINSSQTEPKMFIQP--QTPKPISVQWTLWSIIQLNNQTPWC*TRQ 134
           + +S+ TE K  +Q   +T K +  +  +W+ + LN++TP C  R+
Sbjct: 79  ETSSASTEQKSLVQSAAETVKYLLQEGAIWNDLDLNDETPGCIARR 124



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>YHV5_YEAST (P38851) Hypothetical 143.6 kDa protein in SPO16-REC104 intergenic|
           region
          Length = 1228

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +1

Query: 16  AKQNQKCSYSLKRQNQFQFNGHYGRSYNSIIKLLGAKQDN 135
           AK++  C + L R+ QFQ N    R+ N I  LL  K DN
Sbjct: 826 AKEDASCQFELCRKLQFQLN----RTSNFIKDLLWLKDDN 861



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>ZYGBL_MOUSE (Q80ZJ6) Zyg-11 protein homolog (Zyg-11 homolog B-like)|
          Length = 779

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 6   INSSQTEPKMFIQPQTPKPISVQWTLWSIIQLNNQTP 116
           IN    EP + + PQ   P+S  W  W++  L +  P
Sbjct: 691 INYRSFEPILRLLPQGISPVSQHWATWALYNLVSVYP 727



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>ZYGBL_PONPY (Q5RAG3) Zyg-11 protein homolog (Zyg-11 homolog B-like)|
          Length = 766

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 6   INSSQTEPKMFIQPQTPKPISVQWTLWSIIQLNNQTP 116
           IN    EP + + PQ   P+S  W  W++  L +  P
Sbjct: 678 INYRSFEPILRLLPQGISPVSQHWATWALYNLVSVYP 714



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>ZYGBL_HUMAN (Q7Z7L7) Zyg-11 protein homolog (Zyg-11 homolog B-like)|
          Length = 766

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 6   INSSQTEPKMFIQPQTPKPISVQWTLWSIIQLNNQTP 116
           IN    EP + + PQ   P+S  W  W++  L +  P
Sbjct: 678 INYRSFEPILRLLPQGISPVSQHWATWALYNLVSVYP 714



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>RMT2_EMENI (Q5B058) Arginine N-methyltransferase 2 (EC 2.1.1.-)|
          Length = 426

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 48  QTPKPISVQWTLWSIIQLNNQTPWC*TRQ 134
           QT K +  +  +W+ + LNN+TP C  R+
Sbjct: 95  QTVKLLLQEGAIWNDLDLNNETPGCIARR 123


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,180,085
Number of Sequences: 219361
Number of extensions: 578050
Number of successful extensions: 1333
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1333
length of database: 80,573,946
effective HSP length: 69
effective length of database: 65,438,037
effective search space used: 1570512888
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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