>gb|AY106456.1| Zea mays PCO087051 mRNA sequence
          Length = 1356

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 71/79 (89%)
 Strand = Plus / Minus

                                                                        
Query: 324  ctcacttcttcaacaaggttgcactgcactgagccattatttttgaagcccgtgtgattg 383
            |||||||||||| |||||||||||||||||| ||||| || |||||||| || |||||||
Sbjct: 1049 ctcacttcttcagcaaggttgcactgcactgggccataatctttgaagctcgggtgattg 990

                               
Query: 384  catcggtcatgtaaaagtt 402
            |||| |||||||| |||||
Sbjct: 989  catcagtcatgtagaagtt 971



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 124  caacaagcttattaagtatgctccgcttctca 155
            ||||||||||||| ||||||||| ||||||||
Sbjct: 1264 caacaagcttattgagtatgctctgcttctca 1233

>ref|XM_469533.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2486

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                        
Query: 325  tcacttcttcaacaaggttgcactgcactgagccattatttttgaagcccgtgtgattgc 384
            ||||||||||||||||||||||||||| || |||||||| ||||| || | |||||||||
Sbjct: 2244 tcacttcttcaacaaggttgcactgcattgggccattatctttgaggctcttgtgattgc 2185

                              
Query: 385  atcggtcatgtaaaagtt 402
            ||| ||||| || |||||
Sbjct: 2184 atcagtcatatagaagtt 2167



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                 
Query: 119  aaggacaacaagcttattaagtatgctccgcttctca 155
            |||||||||||||||||| ||||||||| ||||||||
Sbjct: 2448 aaggacaacaagcttattgagtatgctctgcttctca 2412

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                            
Query: 325      tcacttcttcaacaaggttgcactgcactgagccattatttttgaagcccgtgtgattgc 384
                ||||||||||||||||||||||||||| || |||||||| ||||| || | |||||||||
Sbjct: 28561123 tcacttcttcaacaaggttgcactgcattgggccattatctttgaggctcttgtgattgc 28561182

                                  
Query: 385      atcggtcatgtaaaagtt 402
                ||| ||||| || |||||
Sbjct: 28561183 atcagtcatatagaagtt 28561200



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                     
Query: 119      aaggacaacaagcttattaagtatgctccgcttctca 155
                |||||||||||||||||| ||||||||| ||||||||
Sbjct: 28560919 aaggacaacaagcttattgagtatgctctgcttctca 28560955

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                            
Query: 325      tcacttcttcaacaaggttgcactgcactgagccattatttttgaagcccgtgtgattgc 384
                ||||||||||||||||||||||||||| || |||||||| ||||| || | |||||||||
Sbjct: 28652447 tcacttcttcaacaaggttgcactgcattgggccattatctttgaggctcttgtgattgc 28652506

                                  
Query: 385      atcggtcatgtaaaagtt 402
                ||| ||||| || |||||
Sbjct: 28652507 atcagtcatatagaagtt 28652524



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                     
Query: 119      aaggacaacaagcttattaagtatgctccgcttctca 155
                |||||||||||||||||| ||||||||| ||||||||
Sbjct: 28652243 aaggacaacaagcttattgagtatgctctgcttctca 28652279

>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete
              sequence
          Length = 158839

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                          
Query: 325    tcacttcttcaacaaggttgcactgcactgagccattatttttgaagcccgtgtgattgc 384
              ||||||||||||||||||||||||||| || |||||||| ||||| || | |||||||||
Sbjct: 137773 tcacttcttcaacaaggttgcactgcattgggccattatctttgaggctcttgtgattgc 137714

                                
Query: 385    atcggtcatgtaaaagtt 402
              ||| ||||| || |||||
Sbjct: 137713 atcagtcatatagaagtt 137696



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                   
Query: 119    aaggacaacaagcttattaagtatgctccgcttctca 155
              |||||||||||||||||| ||||||||| ||||||||
Sbjct: 137977 aaggacaacaagcttattgagtatgctctgcttctca 137941

>dbj|AK072556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130E21, full
           insert sequence
          Length = 1107

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                       
Query: 325 tcacttcttcaacaaggttgcactgcactgagccattatttttgaagcccgtgtgattgc 384
           ||||||||||||||||||||||||||| || |||||||| ||||| || | |||||||||
Sbjct: 855 tcacttcttcaacaaggttgcactgcattgggccattatctttgaggctcttgtgattgc 796

                             
Query: 385 atcggtcatgtaaaagtt 402
           ||| ||||| || |||||
Sbjct: 795 atcagtcatatagaagtt 778



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                 
Query: 119  aaggacaacaagcttattaagtatgctccgcttctca 155
            |||||||||||||||||| ||||||||| ||||||||
Sbjct: 1059 aaggacaacaagcttattgagtatgctctgcttctca 1023

>dbj|AK071307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087M21, full
            insert sequence
          Length = 2518

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                        
Query: 325  tcacttcttcaacaaggttgcactgcactgagccattatttttgaagcccgtgtgattgc 384
            ||||||||||||||||||||||||||| || |||||||| ||||| || | |||||||||
Sbjct: 2332 tcacttcttcaacaaggttgcactgcattgggccattatctttgaggctcttgtgattgc 2273

                              
Query: 385  atcggtcatgtaaaagtt 402
            ||| ||||| || |||||
Sbjct: 2272 atcagtcatatagaagtt 2255

>dbj|AK058713.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D09, full
            insert sequence
          Length = 1323

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                        
Query: 325  tcacttcttcaacaaggttgcactgcactgagccattatttttgaagcccgtgtgattgc 384
            ||||||||||||||||||||||||||| || |||||||| ||||| || | |||||||||
Sbjct: 1076 tcacttcttcaacaaggttgcactgcattgggccattatctttgaggctcttgtgattgc 1017

                              
Query: 385  atcggtcatgtaaaagtt 402
            ||| ||||| || |||||
Sbjct: 1016 atcagtcatatagaagtt 999



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                 
Query: 119  aaggacaacaagcttattaagtatgctccgcttctca 155
            |||||||||||||||||| ||||||||| ||||||||
Sbjct: 1280 aaggacaacaagcttattgagtatgctctgcttctca 1244

>emb|CT009535.6| M.truncatula DNA sequence from clone MTH2-68D12 on chromosome 3,
             complete sequence
          Length = 82241

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                         
Query: 329   ttcttcaacaaggttgcactgcactgagccattatttttgaagcccgtgtgattgcatcg 388
             ||||||||||  || |||||||| ||||||||||| ||||| ||||  || || ||||| 
Sbjct: 36227 ttcttcaacagcgtagcactgcattgagccattatctttgatgccctggtaatggcatca 36286

                     
Query: 389   gtcatgta 396
             ||||||||
Sbjct: 36287 gtcatgta 36294

>gb|AC154424.2| Mus musculus BAC clone RP23-172A18 from 13, complete sequence
          Length = 179691

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 268    cgaaatggaaaagggcaacta 288
              |||||||||||||||||||||
Sbjct: 128541 cgaaatggaaaagggcaacta 128561

>emb|CR956639.4| Pig DNA sequence from clone CH242-279P20 on chromosome 17, complete
            sequence
          Length = 50643

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 214  gggagacagtccaaatttata 234
            |||||||||||||||||||||
Sbjct: 1797 gggagacagtccaaatttata 1817

>ref|NM_102681.3| Arabidopsis thaliana PAI3 (PHOSPHORIBOSYLANTHRANILATE ISOMERASE 3);
            phosphoribosylanthranilate isomerase AT1G29410 (PAI3)
            transcript variant AT1G29410.2 mRNA, complete cds
          Length = 1638

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 344  gcactgcactgagccattatttttgaagcccgtgtgattgcatcggtcatgtaaaa 399
            ||||||||||||||||| || ||||| || | ||||||||  |  |||||||||||
Sbjct: 1352 gcactgcactgagccatgatctttgaggctcttgtgattgagtttgtcatgtaaaa 1297

>emb|CR407585.14| Zebrafish DNA sequence from clone CH211-141O18 in linkage group 6,
             complete sequence
          Length = 164483

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   gttacagaaaaatgcactgc 178
             ||||||||||||||||||||
Sbjct: 70713 gttacagaaaaatgcactgc 70694

>emb|Z77659.1|CEF23B12 Caenorhabditis elegans Cosmid F23B12, complete sequence
          Length = 27797

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   ttcgaaaggacaacaagctt 133
             ||||||||||||||||||||
Sbjct: 23116 ttcgaaaggacaacaagctt 23097

>emb|AL158207.15| Human DNA sequence from clone RP11-409K20 on chromosome 9 Contains the
              TOR1B gene for torsin family 1 member B (torsin B) (DQ1),
              the DYT1 gene for dystonia 1, torsion (autosomal dominant;
              torsin A) (DQ2, TOR1A), the gene for hepatocellular
              carcinoma-associated antigen 59 (HSPC220, LOC51759), the
              USP20 gene for ubiquitin specific protease 20 (KIAA1003),
              the 3' end of the FNBP1 gene for formin-binding protein 17
              (FBP17), two novel genes, a 60S ribosomal protein L34
              (RPL34) pseudogene and four CpG islands, complete sequence
          Length = 169963

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    aggttgcactgcactgagcc 358
              ||||||||||||||||||||
Sbjct: 161366 aggttgcactgcactgagcc 161385

>emb|CR407558.22| Zebrafish DNA sequence from clone CH211-107M8 in linkage group 8,
              complete sequence
          Length = 175706

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 159    gttacagaaaaatgcactgc 178
              ||||||||||||||||||||
Sbjct: 143554 gttacagaaaaatgcactgc 143573

>ref|NM_001031066.1| Gallus gallus similar to hypothetical protein FLJ38968 (LOC421605),
            mRNA
          Length = 2372

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   gaaatacaacaaaattattt 94
            ||||||||||||||||||||
Sbjct: 1752 gaaatacaacaaaattattt 1733

>emb|AJ720023.1| Gallus gallus mRNA for hypothetical protein, clone 9j8
          Length = 2372

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   gaaatacaacaaaattattt 94
            ||||||||||||||||||||
Sbjct: 1752 gaaatacaacaaaattattt 1733

>gb|AY099722.1| Arabidopsis thaliana phosphoribosylanthranilate isomerase (At1g29410)
            mRNA, complete cds
          Length = 1637

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 344  gcactgcactgagccattatttttgaagcccgtgtgattgcatcggtcatgtaaaa 399
            ||||||||||||||||| || ||||| || | ||||||||  |  |||||||||||
Sbjct: 1351 gcactgcactgagccatgatctttgaggctcttgtgattgagtttgtcatgtaaaa 1296

>gb|AC105460.4| Homo sapiens BAC clone RP11-297P16 from 4, complete sequence
          Length = 185755

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 164    agaaaaatgcactgctttcaagtt 187
              ||||||||| ||||||||||||||
Sbjct: 161747 agaaaaatgaactgctttcaagtt 161724

>gb|AC007859.11| Homo sapiens, clone RP11-41A1, complete sequence
          Length = 157267

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   tccaaatttatattcccagc 242
             ||||||||||||||||||||
Sbjct: 85080 tccaaatttatattcccagc 85099

>gb|AC022031.8| Homo sapiens chromosome 18, clone RP11-397A16, complete sequence
          Length = 202566

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   tccaaatttatattcccagc 242
             ||||||||||||||||||||
Sbjct: 62599 tccaaatttatattcccagc 62580

>emb|BX649559.12| Zebrafish DNA sequence from clone DKEY-33C3 in linkage group 3, complete
              sequence
          Length = 143056

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    cactgagccattatttttga 369
              ||||||||||||||||||||
Sbjct: 102300 cactgagccattatttttga 102281

>ref|NM_074180.3| Caenorhabditis elegans F23B12.7 (F23B12.7) mRNA, complete cds
          Length = 2955

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 114  ttcgaaaggacaacaagctt 133
            ||||||||||||||||||||
Sbjct: 1633 ttcgaaaggacaacaagctt 1614

>gb|AC068667.6|AC068667 Arabidopsis thaliana chromosome 1 BAC F15D2 genomic sequence, complete
             sequence
          Length = 130653

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 344   gcactgcactgagccattatttttgaagcccgtgtgattg 383
             ||||||||||||||||| || ||||| || | ||||||||
Sbjct: 40590 gcactgcactgagccatgatctttgaggctcttgtgattg 40629

>emb|BX004980.8| Zebrafish DNA sequence from clone DKEY-15N5 in linkage group 14,
             complete sequence
          Length = 159333

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   gctgctcctcaaatctagct 209
             ||||||||||||||||||||
Sbjct: 74127 gctgctcctcaaatctagct 74146

>gb|U18969.1|ATU18969 Arabidopsis thaliana phosphoribosylanthranilate isomerase (PAI3)
            gene, complete cds
          Length = 2179

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 344  gcactgcactgagccattatttttgaagcccgtgtgattgcatcggtcatgtaaaa 399
            ||||||||||||||||| || ||||| || | ||||||||  |  |||||||||||
Sbjct: 2171 gcactgcactgagccatgatctttgaggctcttgtgattgagtttgtcatgtaaaa 2116

>emb|AL807797.10| Mouse DNA sequence from clone RP23-417D2 on chromosome X, complete
             sequence
          Length = 157222

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    tacaacaaaattatttgctt 98
             ||||||||||||||||||||
Sbjct: 54056 tacaacaaaattatttgctt 54037

>emb|AL627257.9| Mouse DNA sequence from clone RP23-3L4 on chromosome 4, complete
             sequence
          Length = 241053

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 28    gcatttgcctgcctcctggaatcg 51
             |||| |||||||||||||||||||
Sbjct: 21553 gcatatgcctgcctcctggaatcg 21530

>emb|AL831710.8| Mouse DNA sequence from clone RP23-29K19 on chromosome 4, complete
              sequence
          Length = 191635

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 22     tacattgcatttgcctgcctcctggaat 49
              ||||| |||||||||||| |||||||||
Sbjct: 107815 tacatggcatttgcctgcttcctggaat 107788


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,045,090
Number of Sequences: 3902068
Number of extensions: 4045090
Number of successful extensions: 71036
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70934
Number of HSP's gapped (non-prelim): 102
length of query: 402
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 380
effective length of database: 17,147,199,772
effective search space: 6515935913360
effective search space used: 6515935913360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)