>IL7RA_MOUSE (P16872) Interleukin-7 receptor alpha chain precursor (IL-7R-alpha)|
           (CD127 antigen)
          Length = 459

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = -1

Query: 357 STCPAPSTQSGTRSPTRRSKLLLPLVYRETARQVSSCWYPLPLPVMSPFPAGEQLPFN 184
           STC AP   S      R      P VY++      +   P+P+P   PF +G  +PF+
Sbjct: 375 STCNAPPLLSSRSPDYRDGDRNRPPVYQDLLPNSGNTNVPVPVPQPLPFQSGILIPFS 432

>DUT_BPT5 (O48500) Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC|
           3.6.1.23) (dUTPase) (dUTP pyrophosphatase)
          Length = 148

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 94  NHMEVVEGLERICDLLVKNKYRTHYTRIV 180
           + M+ +E  ER+C L+V   Y TH  +IV
Sbjct: 101 SEMQTLENFERLCQLVVLPHYSTHNFKIV 129

>PTPRT_HUMAN (O14522) Receptor-type tyrosine-protein phosphatase T precursor (EC|
           3.1.3.48) (R-PTP-T) (RPTP-rho)
          Length = 1463

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
 Frame = -1

Query: 291 LPLVYRETARQVSSCWY-----PLPLPVMSPFPAGEQLPFNFYYSSIMSPV 154
           +P+ YR  +   S  ++     P  LPV  PF  G+   +N Y++  +SP+
Sbjct: 648 VPVSYRNASSLDSLHYFAAELKPANLPVTQPFTVGDNKTYNGYWNPPLSPL 698

>PTPRT_MOUSE (Q99M80) Receptor-type tyrosine-protein phosphatase T precursor (EC|
           3.1.3.48) (R-PTP-T) (RPTP-rho) (mRPTPrho) (RPTPmam4)
          Length = 1454

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
 Frame = -1

Query: 291 LPLVYRETARQVSSCWY-----PLPLPVMSPFPAGEQLPFNFYYSSIMSPV 154
           +P+ YR  +   S  ++     P  LPV  PF  G+   +N Y++  +SP+
Sbjct: 652 VPVSYRNASNLDSLHYFAAELKPSNLPVTQPFTVGDNKTYNGYWNPPLSPL 702

>DCTD_YEAST (P06773) Deoxycytidylate deaminase (EC 3.5.4.12) (dCMP deaminase)|
          Length = 312

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/69 (20%), Positives = 37/69 (53%)
 Frame = +1

Query: 10  HILFKLIQNNRRGRFDEQQLLSSLQGLINHMEVVEGLERICDLLVKNKYRTHYTRIVKIK 189
           H+ FK++  +RRGR   Q L+++   +   +++++  E+    L++  + +++ ++  + 
Sbjct: 120 HLRFKIVNEDRRGR--RQSLINN---ITTQLKILDDKEKQMAPLMRPSWDSYFMKLATLA 174

Query: 190 RQLLPCRKR 216
                C KR
Sbjct: 175 ASRSNCMKR 183

>RAD50_METAC (Q8TRL1) DNA double-strand break repair rad50 ATPase|
          Length = 1074

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
 Frame = +1

Query: 16  LFKLIQNNRRGRFDEQQ----LLSSLQGLINHMEVVEGLERICDLLVKNKYRTH 165
           L K ++ N +   D Q+    +L+ L+GL    + +E LE   +LL++NK R H
Sbjct: 477 LEKELRENSKAVLDIQEQKSEVLAELKGLGFAADQLENLEDFSELLLENKSRLH 530

>IF37_MOUSE (O70194) Eukaryotic translation initiation factor 3 subunit 7|
           (eIF-3 zeta) (eIF3 p66) (eIF3d)
          Length = 547

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -2

Query: 347 RLLPHRVVQDRQLEDLSCCCRWSTERRPVRFRLVGILCRC 228
           +L+  R ++  + +D+ CC  WST  +P+     G+   C
Sbjct: 178 QLMKMRYLEVSEPQDIECCGPWSTTTKPLTASPQGVRSPC 217

>SLC2B_HUMAN (Q8NEV8) Slp homolog lacking C2 domains b (Exophilin-5)|
          Length = 1989

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +2

Query: 197  CSPAGKGL-MTGSGKGYQQDET*RAVSR*TSGSSSLDLRVGDLVPLC 334
            C+ +G+ +  TGSGK  Q+D T  AV   +SGS   + R GD+   C
Sbjct: 1447 CTGSGRAIPFTGSGKCPQKDHTSTAVGDGSSGSQPREGR-GDIGTNC 1492

>YE86_SCHPO (O14302) Hypothetical protein C9G1.06c in chromosome I|
          Length = 886

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -1

Query: 348 PAPSTQSGTRSPTRRSKLLLPLVYRETARQVSSCWYPLPLPVMSPFP 208
           P  S++  +R P+  S +L P  Y    R+  S   P+P PV +  P
Sbjct: 268 PMKSSRDISRKPSMASSVLSPSDYFPQHRRFQSAPAPIPRPVSTLIP 314

>CAZA1_CHICK (P13127) F-actin capping protein alpha-1 subunit (CapZ 36/32)|
           (Beta-actinin subunit I)
          Length = 286

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/60 (23%), Positives = 25/60 (41%)
 Frame = +1

Query: 55  DEQQLLSSLQGLINHMEVVEGLERICDLLVKNKYRTHYTRIVKIKRQLLPCRKRTHDWQR 234
           D  Q+ S +Q     ++++E  E      +   Y+T      K  R+ LP  +   DW +
Sbjct: 214 DSVQVSSDVQTAKEFIKIIENAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNK 273

>IF2P_YEAST (P39730) Eukaryotic translation initiation factor 5B (eIF-5B)|
           (Translation initiation factor IF-2)
          Length = 1002

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = +1

Query: 13  ILFKLIQNNRRGRFDEQQLLSSLQGLINHMEVVEGLERICDLLVKNKYRTHYTRIV 180
           +L+ L++  ++    +   LS ++  I  ++VVEG     D+++ N Y     RIV
Sbjct: 608 LLWLLLELTQKRMSKQLMYLSHVEATILEVKVVEGFGTTIDVILSNGYLREGDRIV 663

>Y33B_DROME (Q9U1M2) Hypothetical protein CG32795 in chromosome 1|
          Length = 387

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -1

Query: 189 FNFYYSSIMSPVFIFYKEITYSLQSLHYFHVIDQTLEG 76
           FN Y S +    F + K + Y L++L   H +D T+EG
Sbjct: 219 FNVYISIVQYLQFGYQKGLLYRLKALGERHNMDITIEG 256


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,630,426
Number of Sequences: 219361
Number of extensions: 1212969
Number of successful extensions: 3513
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3512
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)