| Clone Name | rbaet06a09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR385065.21| Zebrafish DNA sequence from clone CH211-232F6 in linkage group 6, complete sequence Length = 194459 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 113 aaatatcaaagtaaataatactaa 136 |||||||||||||||||||||||| Sbjct: 33959 aaatatcaaagtaaataatactaa 33982
>emb|AL928555.8| Zebrafish DNA sequence from clone DKEY-29E5, complete sequence Length = 189224 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 113 aaatatcaaagtaaataatactaa 136 |||||||||||||||||||||||| Sbjct: 182727 aaatatcaaagtaaataatactaa 182750
>emb|AL139042.15| Human DNA sequence from clone RP11-459O1 on chromosome 6 Contains an actin beta (ACTB) pseudogene and part of a novel gene, complete sequence Length = 107745 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 gaggtgaatgacatgactgtt 406 ||||||||||||||||||||| Sbjct: 96242 gaggtgaatgacatgactgtt 96262
>emb|BX927337.10| Zebrafish DNA sequence from clone CH211-139D20 in linkage group 17, complete sequence Length = 113790 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 aaaaaatatcaaagtaaataa 130 ||||||||||||||||||||| Sbjct: 44034 aaaaaatatcaaagtaaataa 44014
>emb|BX322617.9| Zebrafish DNA sequence from clone DKEY-33D4, complete sequence Length = 206855 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 aaaaaatatcaaagtaaataa 130 ||||||||||||||||||||| Sbjct: 161919 aaaaaatatcaaagtaaataa 161899
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 taaataatactaacaccaag 143 |||||||||||||||||||| Sbjct: 996882 taaataatactaacaccaag 996863
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 taaataatactaacaccaag 143 |||||||||||||||||||| Sbjct: 975100 taaataatactaacaccaag 975081
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 taaataatactaacaccaag 143 |||||||||||||||||||| Sbjct: 974994 taaataatactaacaccaag 974975
>gb|AC123042.2| Mus musculus BAC clone RP24-545O17 from 10, complete sequence Length = 177899 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 aaatatcaaagtaaataata 132 |||||||||||||||||||| Sbjct: 133261 aaatatcaaagtaaataata 133242
>gb|AC073635.8| Homo sapiens BAC clone RP11-275G11 from 7, complete sequence Length = 130822 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 aaaaaatatcaaagtaaataatac 133 |||||| ||||||||||||||||| Sbjct: 41079 aaaaaaaatcaaagtaaataatac 41056
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 taaataatactaacaccaag 143 |||||||||||||||||||| Sbjct: 1001087 taaataatactaacaccaag 1001068
>gb|AC159304.2| Mus musculus BAC clone RP23-211E20 from chromosome 13, complete sequence Length = 195948 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 gaaattcatatgtactatattaca 25 |||||||||||||||||| ||||| Sbjct: 75376 gaaattcatatgtactattttaca 75399
>gb|AE014824.1| Plasmodium falciparum 3D7 chromosome 14 section 9 of 13 of the complete sequence Length = 250022 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 aaaaaatatcaaagtaaata 129 |||||||||||||||||||| Sbjct: 72735 aaaaaatatcaaagtaaata 72716
>emb|AL033522.1|HS451B21 Human DNA sequence from clone RP3-451B21 on chromosome 6q24 Contains the HSPC228 gene for hypothetical protein HSPC228 and a novel gene, complete sequence Length = 135162 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tcatatgtactatattacaa 26 |||||||||||||||||||| Sbjct: 10729 tcatatgtactatattacaa 10748
>emb|BX901886.8| Zebrafish DNA sequence from clone CH211-261H19 in linkage group 1, complete sequence Length = 158729 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 atcaaagtaaataatactaa 136 |||||||||||||||||||| Sbjct: 145608 atcaaagtaaataatactaa 145627
>gb|AC098851.5| Homo sapiens BAC clone RP13-574L22 from 7, complete sequence Length = 161470 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 aaaaaatatcaaagtaaataatac 133 |||||| ||||||||||||||||| Sbjct: 147327 aaaaaaaatcaaagtaaataatac 147304
>emb|BX005475.19| Zebrafish DNA sequence from clone CH211-165I18 in linkage group 4, complete sequence Length = 157194 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 aaatatcaaagtaaataata 132 |||||||||||||||||||| Sbjct: 154654 aaatatcaaagtaaataata 154635
>gb|AC158525.2| Mus musculus BAC clone RP23-367E3 from chromosome 14, complete sequence Length = 179650 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 aaattcatatgtactatatt 22 |||||||||||||||||||| Sbjct: 153525 aaattcatatgtactatatt 153506
>emb|BX088652.6| Zebrafish DNA sequence from clone DKEY-256M19 in linkage group 1, complete sequence Length = 161341 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 atcaaagtaaataatactaa 136 |||||||||||||||||||| Sbjct: 130566 atcaaagtaaataatactaa 130585
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 taaataatactaacaccaag 143 |||||||||||||||||||| Sbjct: 975099 taaataatactaacaccaag 975080 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,499,035 Number of Sequences: 3902068 Number of extensions: 3499035 Number of successful extensions: 66655 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66523 Number of HSP's gapped (non-prelim): 132 length of query: 423 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 401 effective length of database: 17,147,199,772 effective search space: 6876027108572 effective search space used: 6876027108572 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)