ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet03c07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ACVS_STRCL (Q01757) N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D... 29 3.9

>ACVS_STRCL (Q01757) N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine|
           synthase (EC 6.3.2.26)
           (Delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine
           synthetase) (ACV synthetase) (ACVS) (Fragment)
          Length = 805

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 25  VQSGDIKARSTFYCGARRCLDAPRHNRIGG 114
           V+ G+I+A++T Y G R+C+   R    GG
Sbjct: 688 VEPGEIEAQATEYAGVRKCVVIAREGAGGG 717


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,519,305
Number of Sequences: 219361
Number of extensions: 440844
Number of successful extensions: 1385
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 80,573,946
effective HSP length: 35
effective length of database: 72,896,311
effective search space used: 1749511464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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