ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet02h07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB029935.1| Triticum aestivum mRNA for chitinase 2, complete cds Length = 1163 Score = 214 bits (108), Expect = 2e-52 Identities = 138/148 (93%) Strand = Plus / Minus Query: 224 atctcactgcaccgcgagcccgatgttgaacgacaattggttgtagcagtcgaggttatt 283 ||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 983 atctcactgtgccgcgagcccaacgttgaacgacaattggttgtagcagtcgaggttatt 924 Query: 284 cccgtagccgatgccgaagatgtcacagtagcgcttgtaaaacccgatccggtcggccac 343 |||||||||||||||||| |||||||| ||||||||||| ||||||||||| || ||||| Sbjct: 923 cccgtagccgatgccgaaaatgtcacaatagcgcttgtagaacccgatccgatccgccac 864 Query: 344 cttgtcgttctgccccttgccgcattcg 371 |||||||||||||||| ||||||||||| Sbjct: 863 cttgtcgttctgccccatgccgcattcg 836 Score = 83.8 bits (42), Expect = 4e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 113 aggtctggacatccatttatttggtcataaaatacttaccaagattatttattt 166 |||||||| |||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 1085 aggtctggtcatccatttatttggtcataaagtacttcccaagattatttattt 1032
>emb|X15349.1|HVENDCHT Barley (H.vulgare) mRNA for endochitinase Length = 556 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 265 tgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttgtaaa 324 |||||||||||||||| || |||||||| | ||||| |||||| |||||||||||||||| Sbjct: 517 tgtagcagtcgaggttgttgccgtagccaacgccgaggatgtcgcagtagcgcttgtaaa 458 Query: 325 acccgatccggtcggc 340 |||||||||| ||||| Sbjct: 457 acccgatccgatcggc 442
>gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitinase gene, complete cds Length = 1684 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 265 tgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttgtaaa 324 |||||||||||||||| || |||||||| | ||||| |||||| |||||||||||||||| Sbjct: 1536 tgtagcagtcgaggttgttgccgtagccaacgccgaggatgtcgcagtagcgcttgtaaa 1477 Query: 325 acccgatccggtcggc 340 |||||||||| ||||| Sbjct: 1476 acccgatccgatcggc 1461
>gb|AY973230.1| Triticum aestivum cultivar Sumai 3 class II chitinase gene, complete cds Length = 811 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||||||||| | |||||||| | ||||| |||||| |||||||||||| Sbjct: 785 tggttgtagcagtcgaggttgtcgccgtagccaacgccgaggatgtcgcagtagcgcttg 726 Query: 321 taaaacccgatccg 334 |||||||||||||| Sbjct: 725 taaaacccgatccg 712
>gb|AY973229.1| Triticum aestivum cultivar Gamenya class II chitinase gene, complete cds Length = 891 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||||||||| | |||||||| | ||||| |||||| |||||||||||| Sbjct: 785 tggttgtagcagtcgaggttgtcgccgtagccaacgccgaggatgtcgcagtagcgcttg 726 Query: 321 taaaacccgatccg 334 |||||||||||||| Sbjct: 725 taaaacccgatccg 712
>dbj|AB051579.1| Secale cereale rscc mRNA for seed chitinase-c, complete cds Length = 1018 Score = 89.7 bits (45), Expect = 6e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 264 ttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttgtaa 323 ||||||||||||||||| | |||||||| | ||||| |||||| ||||||||||||||| Sbjct: 836 ttgtagcagtcgaggttgtcgccgtagccaacgccgaggatgtcgcagtagcgcttgtaa 777 Query: 324 aacccgatccggtcggc 340 ||||||||||| ||||| Sbjct: 776 aacccgatccgatcggc 760
>gb|L34210.1|BLYCHI26A Hordeum vulgare chitinase (CHI26) gene, complete cds Length = 3169 Score = 87.7 bits (44), Expect = 2e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 265 tgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttgtaaa 324 ||||||| |||||||| || |||||||| | ||||| ||||||||||||||||||||||| Sbjct: 2478 tgtagcaatcgaggttgttgccgtagccaacgccgaggatgtcacagtagcgcttgtaaa 2419 Query: 325 acccgatccggtcggc 340 ||||||| || ||||| Sbjct: 2418 acccgattcgatcggc 2403
>gb|M62904.1|BLYCHI H.vulgare L. 26kD chitinase mRNA, complete cds Length = 998 Score = 87.7 bits (44), Expect = 2e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 265 tgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttgtaaa 324 ||||||| |||||||| || |||||||| | ||||| ||||||||||||||||||||||| Sbjct: 841 tgtagcaatcgaggttgttgccgtagccaacgccgaggatgtcacagtagcgcttgtaaa 782 Query: 325 acccgatccggtcggc 340 ||||||| || ||||| Sbjct: 781 acccgattcgatcggc 766
>emb|X54367.1|OSCHIT Oryza sativa (rice) gene for endochitinase Length = 1237 Score = 85.7 bits (43), Expect = 9e-14 Identities = 79/91 (86%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 ||||||||||| || ||||||| || |||| || ||| | ||||| |||||||||||| Sbjct: 1080 tggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagtagcgcttg 1021 Query: 321 taaaacccgatccggtcggccaccttgtcgt 351 || |||||||||||||||||||||||||||| Sbjct: 1020 tagaacccgatccggtcggccaccttgtcgt 990
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 85.7 bits (43), Expect = 9e-14 Identities = 79/91 (86%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 ||||||||||| || ||||||| || |||| || ||| | ||||| |||||||||||| Sbjct: 30372331 tggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagtagcgcttg 30372272 Query: 321 taaaacccgatccggtcggccaccttgtcgt 351 || |||||||||||||||||||||||||||| Sbjct: 30372271 tagaacccgatccggtcggccaccttgtcgt 30372241 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 30375940 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 30375881 Query: 321 taaaacccgatccggtcggc 340 || ||||| ||||||||||| Sbjct: 30375880 tagaacccaatccggtcggc 30375861
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017G10 Length = 166700 Score = 85.7 bits (43), Expect = 9e-14 Identities = 79/91 (86%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 ||||||||||| || ||||||| || |||| || ||| | ||||| |||||||||||| Sbjct: 9692 tggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagtagcgcttg 9633 Query: 321 taaaacccgatccggtcggccaccttgtcgt 351 || |||||||||||||||||||||||||||| Sbjct: 9632 tagaacccgatccggtcggccaccttgtcgt 9602 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 13301 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 13242 Query: 321 taaaacccgatccggtcggc 340 || ||||| ||||||||||| Sbjct: 13241 tagaacccaatccggtcggc 13222
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 85.7 bits (43), Expect = 9e-14 Identities = 79/91 (86%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 ||||||||||| || ||||||| || |||| || ||| | ||||| |||||||||||| Sbjct: 118926 tggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagtagcgcttg 118867 Query: 321 taaaacccgatccggtcggccaccttgtcgt 351 || |||||||||||||||||||||||||||| Sbjct: 118866 tagaacccgatccggtcggccaccttgtcgt 118836 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 122535 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 122476 Query: 321 taaaacccgatccggtcggc 340 || ||||| ||||||||||| Sbjct: 122475 tagaacccaatccggtcggc 122456
>gb|AF000965.1|AF000965 Poa pratensis chitinase (Chi3) pseudogene sequence Length = 1173 Score = 85.7 bits (43), Expect = 9e-14 Identities = 91/107 (85%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||| ||||| | |||||||| || ||||| || ||| |||||||||||| Sbjct: 1134 tggttgtagcagtccaggttgtccccgtagctgacgccgaggaggtcgcagtagcgcttg 1075 Query: 321 taaaacccgatccggtcggccaccttgtcgttctgccccttgccgca 367 || |||||||||| |||||| || || || ||||||||||||||| Sbjct: 1074 tagaacccgatcctgtcggcgacgcggttgtcctgccccttgccgca 1028
>dbj|AK061280.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F06, full insert sequence Length = 1169 Score = 85.7 bits (43), Expect = 9e-14 Identities = 79/91 (86%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 ||||||||||| || ||||||| || |||| || ||| | ||||| |||||||||||| Sbjct: 1018 tggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagtagcgcttg 959 Query: 321 taaaacccgatccggtcggccaccttgtcgt 351 || |||||||||||||||||||||||||||| Sbjct: 958 tagaacccgatccggtcggccaccttgtcgt 928
>dbj|D16223.1|RICCHT3 Oryza sativa (japonica cultivar-group) Cht-3 gene for endochitinase, complete cds Length = 2808 Score = 85.7 bits (43), Expect = 9e-14 Identities = 79/91 (86%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 ||||||||||| || ||||||| || |||| || ||| | ||||| |||||||||||| Sbjct: 2773 tggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagtagcgcttg 2714 Query: 321 taaaacccgatccggtcggccaccttgtcgt 351 || |||||||||||||||||||||||||||| Sbjct: 2713 tagaacccgatccggtcggccaccttgtcgt 2683
>emb|Z29962.1|OSCHITIB O.sativa (PCH6) mRNA for chitinase class I Length = 1100 Score = 77.8 bits (39), Expect = 2e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 309 cagtagcgcttgtaaaacccgatccggtcggccaccttgtcgt 351 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 902 cagtagcgcttgtagaacccgatccggtcggccaccttgtcgt 860
>gb|AF000966.1|AF000966 Poa pratensis chitinase (Chi2) gene, complete cds Length = 1080 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 265 tgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttgtaaa 324 |||||||||| ||||| || ||||||| || ||||| || ||| |||||||||||||| | Sbjct: 967 tgtagcagtccaggttgtttccgtagctgacgccgaggaggtcgcagtagcgcttgtaga 908 Query: 325 acccgatccggtc 337 ||||||||||||| Sbjct: 907 acccgatccggtc 895
>dbj|AB029936.1| Triticum aestivum Chi 3 mRNA for chitinase 3, complete cds Length = 1148 Score = 73.8 bits (37), Expect = 4e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 260 ttggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgctt 319 ||||||||||||||| ||||| | ||||||| || ||| | || ||| ||||||||||| Sbjct: 996 ttggttgtagcagtccaggttgtcaccgtagctgacgccaaggaggtcgcagtagcgctt 937 Query: 320 gtaaaacccgatccggtcggc 340 ||| ||||||||||||||||| Sbjct: 936 gtagaacccgatccggtcggc 916
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence Length = 146303 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||| ||||||||||||||| |||||||||||||||||| | ||| |||||||||| | Sbjct: 96288 tggtcgtagcagtcgaggttgctcccgtagccgatgccgagcacgtcgcagtagcgctgg 96229 Query: 321 taaaacccgatccggt 336 || || |||||||||| Sbjct: 96228 tagaagccgatccggt 96213 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 284 cccgtagccgatgccgaagatgtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||||| ||||| | ||| |||||||||||||| ||| ||| ||||||||| Sbjct: 107042 cccgtagccgacgccgagcacgtcgcagtagcgcttgtagaacgcgacccggtcggc 106986 Score = 48.1 bits (24), Expect = 0.020 Identities = 63/76 (82%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||||||||| ||| |||||||||||| | |||||||||||| | Sbjct: 87376 tggttgtagcagtcgaggttgccgccggtgccgatgccgaacgcgccacagtagcgctgg 87317 Query: 321 taaaacccgatccggt 336 || || |||||||||| Sbjct: 87316 tagaagccgatccggt 87301
>gb|AY444342.1| Oryza sativa chitinase gene, complete cds Length = 1101 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||| ||||||||||||||| |||||||||||||||||| | ||| |||||||||| | Sbjct: 1064 tggtcgtagcagtcgaggttgctcccgtagccgatgccgagcacgtcgcagtagcgctgg 1005 Query: 321 taaaacccgatccggt 336 || || |||||||||| Sbjct: 1004 tagaagccgatccggt 989
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||| ||||||||||||||| |||||||||||||||||| | ||| |||||||||| | Sbjct: 19292213 tggtcgtagcagtcgaggttgctcccgtagccgatgccgagcacgtcgcagtagcgctgg 19292154 Query: 321 taaaacccgatccggt 336 || || |||||||||| Sbjct: 19292153 tagaagccgatccggt 19292138 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 284 cccgtagccgatgccgaagatgtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||||| ||||| | ||| |||||||||||||| ||| ||| ||||||||| Sbjct: 19302967 cccgtagccgacgccgagcacgtcgcagtagcgcttgtagaacgcgacccggtcggc 19302911 Score = 48.1 bits (24), Expect = 0.020 Identities = 63/76 (82%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||||||||| ||| |||||||||||| | |||||||||||| | Sbjct: 19283301 tggttgtagcagtcgaggttgccgccggtgccgatgccgaacgcgccacagtagcgctgg 19283242 Query: 321 taaaacccgatccggt 336 || || |||||||||| Sbjct: 19283241 tagaagccgatccggt 19283226
>gb|AF280437.1|AF280437 Secale cereale 31.7 kDa class I endochitinase-antifreeze protein precursor, mRNA, complete cds Length = 1192 Score = 71.9 bits (36), Expect = 1e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||| || || | ||||||| || ||||| || |||||||||||||||| Sbjct: 989 tggttgtagcagtccagattgtggccgtagctgacgccgaggaggtcacagtagcgcttg 930 Query: 321 taaaacccgatccggtcggc 340 || |||||||| |||||||| Sbjct: 929 tagaacccgattcggtcggc 910
>gb|AY437443.1| Triticum aestivum cultivar Ning 7840 class I chitinase mRNA, complete cds Length = 1121 Score = 71.9 bits (36), Expect = 1e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||| ||||| | ||||||| || ||||| | ||| |||||||||||| Sbjct: 1009 tggttgtagcagtccaggttgtcgccgtagctgacgccgagtaggtcgcagtagcgcttg 950 Query: 321 taaaacccgatccggtcggc 340 || ||||||||||||||||| Sbjct: 949 tagaacccgatccggtcggc 930
>gb|L34211.1|BLYCHI33A Hordeum vulgare chitinase (CHI33) gene, complete cds Length = 1779 Score = 71.9 bits (36), Expect = 1e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||||||||| ||||||||||| ||| | ||||| |||||||||| | Sbjct: 1634 tggttgtagcagtcgaggttgcccccgtagccgacgccaaggatgttgcagtagcgctgg 1575 Query: 321 taaaacccgatccggtcggc 340 || || |||||||||||||| Sbjct: 1574 tagaagccgatccggtcggc 1555
>gb|L37289.1|RICCHITA Oryza sativa chitinase mRNA, complete cds Length = 1291 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||| ||||||||||||||| |||||||||||||||||| | ||| |||||||||| | Sbjct: 1007 tggtcgtagcagtcgaggttgctcccgtagccgatgccgagcacgtcgcagtagcgctgg 948 Query: 321 taaaacccgatccggt 336 || || |||||||||| Sbjct: 947 tagaagccgatccggt 932
>gb|AF000964.1|AF000964 Poa pratensis chitinase (Chi1) gene, complete cds Length = 1252 Score = 69.9 bits (35), Expect = 6e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 263 gttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttgta 322 |||||||||||| ||||| | ||||||| || ||||| || ||| |||||||||||||| Sbjct: 975 gttgtagcagtccaggttgtctccgtagctgacgccgaggaggtcgcagtagcgcttgta 916 Query: 323 aaacccgatccggtc 337 |||||||||||||| Sbjct: 915 gaacccgatccggtc 901
>gb|L40336.1|RICCHITB Oryza sativa chitinase (Rcht2) gene, complete cds Length = 5595 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||||||||| |||||||||| |||||| ||||| |||||||||||| Sbjct: 4846 tggttgtagcagtcgaggttgctcccgtagcctgtgccgagcatgtcgcagtagcgcttg 4787 Query: 321 ta 322 || Sbjct: 4786 ta 4785
>gb|L40338.1|RICRCH0 Oryza sativa (clone RCH08) chitinase (Rcht2) mRNA, 3' end of cds Length = 652 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||||||||| |||||||||| |||||| ||||| |||||||||||| Sbjct: 509 tggttgtagcagtcgaggttgctcccgtagcctgtgccgagcatgtcgcagtagcgcttg 450 Query: 321 ta 322 || Sbjct: 449 ta 448
>gb|AF013580.1|AF013580 Oryza sativa clone RGCH8 chitinase gene, complete cds Length = 2730 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||||||||| |||||||||| |||||| ||||| |||||||||||| Sbjct: 2296 tggttgtagcagtcgaggttgctcccgtagcctgtgccgagcatgtcgcagtagcgcttg 2237 Query: 321 ta 322 || Sbjct: 2236 ta 2235
>gb|AF001500.1|OSAF001500 Oryza sativa clone MIRCH1 chitinase mRNA, partial cds Length = 913 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||||||||| |||||||||| |||||| ||||| |||||||||||| Sbjct: 756 tggttgtagcagtcgaggttgctcccgtagcctgtgccgagcatgtcgcagtagcgcttg 697 Query: 321 ta 322 || Sbjct: 696 ta 695
>gb|AY997529.2| Musa x paradisiaca chitinase (Chi-1) mRNA, complete cds Length = 1082 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 285 ccgtagccgatgccgaagatgtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||| || ||||| |||||| |||||||||||||| || |||||||||||||| Sbjct: 981 ccgtagctgacgccgaggatgtcgcagtagcgcttgtagaagccgatccggtcggc 926
>gb|L40337.1|RICRCH1 Oryza sativa chitinase (Rcht1) mRNA, complete cds Length = 1204 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||| ||||||||||||||| |||||||||||||||||| | || |||||||||| | Sbjct: 971 tggtcgtagcagtcgaggttgctcccgtagccgatgccgagcacgttgcagtagcgctgg 912 Query: 321 taaaacccgatccggt 336 || || |||||||||| Sbjct: 911 tagaagccgatccggt 896
>ref|XM_468715.1| Oryza sativa (japonica cultivar-group), mRNA Length = 981 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 286 cgtagccgatgccgaagatgtcacagtagcgcttgtaaaacccgatccggtcggc 340 |||||| || ||||| |||||| |||||||||||||| || |||||||||||||| Sbjct: 937 cgtagctgacgccgaggatgtcgcagtagcgcttgtagaagccgatccggtcggc 883
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 286 cgtagccgatgccgaagatgtcacagtagcgcttgtaaaacccgatccggtcggc 340 |||||| || ||||| |||||| |||||||||||||| || |||||||||||||| Sbjct: 17204043 cgtagctgacgccgaggatgtcgcagtagcgcttgtagaagccgatccggtcggc 17203989
>gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genomic sequence, complete sequence Length = 115326 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 286 cgtagccgatgccgaagatgtcacagtagcgcttgtaaaacccgatccggtcggc 340 |||||| || ||||| |||||| |||||||||||||| || |||||||||||||| Sbjct: 36787 cgtagctgacgccgaggatgtcgcagtagcgcttgtagaagccgatccggtcggc 36733
>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete sequence Length = 153247 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 286 cgtagccgatgccgaagatgtcacagtagcgcttgtaaaacccgatccggtcggc 340 |||||| || ||||| |||||| |||||||||||||| || |||||||||||||| Sbjct: 95436 cgtagctgacgccgaggatgtcgcagtagcgcttgtagaagccgatccggtcggc 95382
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 286 cgtagccgatgccgaagatgtcacagtagcgcttgtaaaacccgatccggtcggc 340 |||||| || ||||| |||||| |||||||||||||| || |||||||||||||| Sbjct: 17197612 cgtagctgacgccgaggatgtcgcagtagcgcttgtagaagccgatccggtcggc 17197558
>gb|AY106654.1| Zea mays PCO078819 mRNA sequence Length = 574 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 283 tcccgtagccgatgccgaagatgtcacagtagcgcttgtaaaacccgatccggtcgg 339 ||||||||||||||| ||||| || |||||||||||||| || || |||||||||| Sbjct: 229 tcccgtagccgatgcggaagacatcgcagtagcgcttgtagaagccaatccggtcgg 285
>gb|AY378172.1| Oryza sativa (japonica cultivar-group) OsmChiI-34 mRNA, partial cds Length = 894 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 890 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 831 Query: 321 taaaacccgatccggtcggc 340 || ||||| ||||||||||| Sbjct: 830 tagaacccaatccggtcggc 811
>emb|Z29961.1|OSCHITIA O.sativa (PCH16) mRNA for chitinase class I Length = 1159 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 1073 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 1014 Query: 321 taaaacccgatccggtcggc 340 || ||||| ||||||||||| Sbjct: 1013 tagaacccaatccggtcggc 994
>emb|X87109.1|OSDNARC24 O.sativa RC24 gene Length = 2048 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 2006 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 1947 Query: 321 taaaacccgatccggtcggc 340 || ||||| ||||||||||| Sbjct: 1946 tagaacccaatccggtcggc 1927
>emb|X76041.1|TACHIG T.aestivum (Chinese spring) chi gene for endochitinase Length = 1985 Score = 56.0 bits (28), Expect = 8e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 309 cagtagcgcttgtaaaacccgatccggtcggc 340 |||||||||||||| ||||||||||||||||| Sbjct: 1531 cagtagcgcttgtagaacccgatccggtcggc 1500
>emb|X56063.1|OSENDO O.sativa mRNA for endochitinase Length = 1160 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 905 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 846 Query: 321 taaaacccgatccggtcggc 340 || ||||| ||||||||||| Sbjct: 845 tagaacccaatccggtcggc 826
>dbj|AB051578.1| Secale cereale rsca mRNA for seed chitinase-a, complete cds Length = 1191 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||| ||||||||||| || || ||||| | | | |||||| |||||||||||| Sbjct: 1007 tggttgtaacagtcgaggttgttgccatagccaacacgaaggatgtcgcagtagcgcttg 948 Query: 321 taaaacccgatccggtcggc 340 ||||||||||| || ||||| Sbjct: 947 taaaacccgattcgatcggc 928
>dbj|AK105798.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A08, full insert sequence Length = 1141 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 1010 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 951 Query: 321 taaaacccgatccggtcggc 340 || ||||| ||||||||||| Sbjct: 950 tagaacccaatccggtcggc 931
>dbj|AK104020.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-C04, full insert sequence Length = 1136 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 1005 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 946 Query: 321 taaaacccgatccggtcggc 340 || ||||| ||||||||||| Sbjct: 945 tagaacccaatccggtcggc 926
>dbj|AK099339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028I21, full insert sequence Length = 1174 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 986 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 927 Query: 321 taaaacccgatccggtcggc 340 || ||||| ||||||||||| Sbjct: 926 tagaacccaatccggtcggc 907
>dbj|AK061042.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-D05, full insert sequence Length = 1217 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 1008 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 949 Query: 321 taaaacccgatccggtcggc 340 || ||||| ||||||||||| Sbjct: 948 tagaacccaatccggtcggc 929
>dbj|D16221.1|RICCHT1 Oryza sativa (japonica cultivar-group) Cht-1 gene for endochitinase, complete cds Length = 2739 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 2270 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 2211 Query: 321 taaaacccgatccggtcggc 340 || ||||| ||||||||||| Sbjct: 2210 tagaacccaatccggtcggc 2191
>ref|NM_197596.1| Oryza sativa (japonica cultivar-group) chitinase (OSJNBb0015I11.14), mRNA Length = 924 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||||||||| | |||||||| ||||| ||||| |||||||||||| Sbjct: 767 tggttgtagcagtcgaggttgctgccgtagcctgcgccgagcatgtcgcagtagcgcttg 708 Query: 321 ta 322 || Sbjct: 707 ta 706
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||||||||| | |||||||| ||||| ||||| |||||||||||| Sbjct: 89608 tggttgtagcagtcgaggttgctgccgtagcctgcgccgagcatgtcgcagtagcgcttg 89549 Query: 321 ta 322 || Sbjct: 89548 ta 89547 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggtt 280 |||||||||||||||||||| Sbjct: 104334 tggttgtagcagtcgaggtt 104315
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||||||||| | |||||||| ||||| ||||| |||||||||||| Sbjct: 20688156 tggttgtagcagtcgaggttgctgccgtagcctgcgccgagcatgtcgcagtagcgcttg 20688097 Query: 321 ta 322 || Sbjct: 20688096 ta 20688095 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggtt 280 |||||||||||||||||||| Sbjct: 20702882 tggttgtagcagtcgaggtt 20702863
>dbj|AK070067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042L15, full insert sequence Length = 1073 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||||||||| | |||||||| ||||| ||||| |||||||||||| Sbjct: 793 tggttgtagcagtcgaggttgctgccgtagcctgcgccgagcatgtcgcagtagcgcttg 734 Query: 321 ta 322 || Sbjct: 733 ta 732
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||||||||| | |||||||| ||||| ||||| |||||||||||| Sbjct: 20699428 tggttgtagcagtcgaggttgctgccgtagcctgcgccgagcatgtcgcagtagcgcttg 20699369 Query: 321 ta 322 || Sbjct: 20699368 ta 20699367 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggtt 280 |||||||||||||||||||| Sbjct: 20714154 tggttgtagcagtcgaggtt 20714135
>dbj|AB016497.1| Oryza sativa mRNA for chitinase, complete cds Length = 923 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||||||||| | |||||||| ||||| ||||| |||||||||||| Sbjct: 773 tggttgtagcagtcgaggttgctgccgtagcctgcgccgagcatgtcgcagtagcgcttg 714 Query: 321 ta 322 || Sbjct: 713 ta 712
>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16, complete sequence Length = 170233 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 284 cccgtagccgatgccgaagatgtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||||| ||||| | ||| |||||||||||||| ||| ||| ||||||||| Sbjct: 6316 cccgtagccgacgccgagcacgtcgcagtagcgcttgtagaacgcgacccggtcggc 6260
>dbj|AK071196.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086B11, full insert sequence Length = 1305 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 284 cccgtagccgatgccgaagatgtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||||| ||||| | ||| |||||||||||||| ||| ||| ||||||||| Sbjct: 1029 cccgtagccgacgccgagcacgtcgcagtagcgcttgtagaacgcgacccggtcggc 973
>dbj|AB096139.1| Oryza sativa (japonica cultivar-group) Chia1d mRNA for chitinase, complete cds Length = 1285 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 284 cccgtagccgatgccgaagatgtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||||| ||||| | ||| |||||||||||||| ||| ||| ||||||||| Sbjct: 1016 cccgtagccgacgccgagcacgtcgcagtagcgcttgtagaacgcgacccggtcggc 960
>dbj|AB012855.1| Oryza sativa mRNA for chitinase, complete cds Length = 1300 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 284 cccgtagccgatgccgaagatgtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||||| ||||| | ||| |||||||||||||| ||| ||| ||||||||| Sbjct: 1031 cccgtagccgacgccgagcacgtcgcagtagcgcttgtagaacgcgacccggtcggc 975
>dbj|AB018248.1| Oryza sativa (indica cultivar-group) mRNA for chitinase, complete cds Length = 1280 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 284 cccgtagccgatgccgaagatgtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||||| ||||| | ||| |||||||||||||| ||| ||| ||||||||| Sbjct: 1005 cccgtagccgacgccgagcacgtcgcagtagcgcttgtagaacgcgacccggtcggc 949
>emb|X56787.1|OSLMRNAC O.sativa L. mRNA for endochitinase Length = 1186 Score = 48.1 bits (24), Expect = 0.020 Identities = 63/76 (82%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||||||||| ||| |||||||||||| | |||||||||||| | Sbjct: 986 tggttgtagcagtcgaggttgccgccggtgccgatgccgaacgcgccacagtagcgctgg 927 Query: 321 taaaacccgatccggt 336 || || |||||||||| Sbjct: 926 tagaagccgatccggt 911
>dbj|AK108949.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-C03, full insert sequence Length = 979 Score = 48.1 bits (24), Expect = 0.020 Identities = 63/76 (82%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||||||||| ||| |||||||||||| | |||||||||||| | Sbjct: 651 tggttgtagcagtcgaggttgccgccggtgccgatgccgaacgcgccacagtagcgctgg 592 Query: 321 taaaacccgatccggt 336 || || |||||||||| Sbjct: 591 tagaagccgatccggt 576
>dbj|D16222.1|RICCHT2 Oryza sativa (japonica cultivar-group) Cht-2 gene for endochitinase, complete cds Length = 2986 Score = 48.1 bits (24), Expect = 0.020 Identities = 63/76 (82%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 320 |||||||||||||||||||| ||| |||||||||||| | |||||||||||| | Sbjct: 2421 tggttgtagcagtcgaggttgccgccggtgccgatgccgaacgcgccacagtagcgctgg 2362 Query: 321 taaaacccgatccggt 336 || || |||||||||| Sbjct: 2361 tagaagccgatccggt 2346
>gb|L37876.1|PEACHI2I Pisum sativum chitinase class I (chi2) gene, complete cds Length = 1670 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Minus Query: 303 atgtcacagtagcgcttgtaaaacccgatccg 334 ||||||||||| | |||||||||||||||||| Sbjct: 1137 atgtcacagtatctcttgtaaaacccgatccg 1106
>gb|AC146189.3| Pan troglodytes BAC clone CH251-490L21 from Y, complete sequence Length = 180597 Score = 46.1 bits (23), Expect = 0.080 Identities = 23/23 (100%) Strand = Plus / Minus Query: 179 cacatccacacacgcacatgcat 201 ||||||||||||||||||||||| Sbjct: 119650 cacatccacacacgcacatgcat 119628
>gb|AC140850.20| Medicago truncatula clone mth2-11i23, complete sequence Length = 138846 Score = 46.1 bits (23), Expect = 0.080 Identities = 26/27 (96%) Strand = Plus / Minus Query: 174 atcatcacatccacacacgcacatgca 200 |||||||||||| |||||||||||||| Sbjct: 130057 atcatcacatccccacacgcacatgca 130031
>emb|AJ012821.1|CAR012821 Cicer arietinum mRNA for class I chitinase Length = 1345 Score = 46.1 bits (23), Expect = 0.080 Identities = 32/35 (91%) Strand = Plus / Minus Query: 300 aagatgtcacagtagcgcttgtaaaacccgatccg 334 |||||||||||||| | ||||||||| |||||||| Sbjct: 889 aagatgtcacagtatctcttgtaaaaaccgatccg 855
>dbj|BS000612.1| Pan troglodytes chromosome Y clone:PTBY-009O17, complete sequences Length = 80000 Score = 46.1 bits (23), Expect = 0.080 Identities = 23/23 (100%) Strand = Plus / Plus Query: 179 cacatccacacacgcacatgcat 201 ||||||||||||||||||||||| Sbjct: 64086 cacatccacacacgcacatgcat 64108
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 46.1 bits (23), Expect = 0.080 Identities = 23/23 (100%) Strand = Plus / Minus Query: 179 cacatccacacacgcacatgcat 201 ||||||||||||||||||||||| Sbjct: 23891747 cacatccacacacgcacatgcat 23891725
>gb|AC154093.1| Homo sapiens chromosome 13 clone fa0790, complete sequence Length = 37001 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 cacatccacacacgcacatgca 200 |||||||||||||||||||||| Sbjct: 36335 cacatccacacacgcacatgca 36356
>gb|AC124684.3| Mus musculus BAC clone RP24-375D13 from chromosome 1, complete sequence Length = 167927 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 acatccacacacgcacatgcat 201 |||||||||||||||||||||| Sbjct: 115354 acatccacacacgcacatgcat 115375
>emb|AL359649.8| Human DNA sequence from clone RP11-65D24 on chromosome 13 Contains 2 novel genes, complete sequence Length = 144792 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 cacatccacacacgcacatgca 200 |||||||||||||||||||||| Sbjct: 109684 cacatccacacacgcacatgca 109663
>gb|AC153149.4| Mus musculus BAC clone RP23-176O2 from chromosome 3, complete sequence Length = 206540 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 cacatccacacacgcacatgca 200 |||||||||||||||||||||| Sbjct: 146384 cacatccacacacgcacatgca 146405
>gb|AC084760.2| Gallus gallus clone WAG-65N20, complete sequence Length = 109569 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 130 tatttggtcataaaatacttac 151 |||||||||||||||||||||| Sbjct: 23660 tatttggtcataaaatacttac 23639
>gb|AC019306.10| Homo sapiens chromosome 18, clone RP11-326M20, complete sequence Length = 175840 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 179 cacatccacacacgcacatgcataaa 204 ||||| |||||||||||||||||||| Sbjct: 137699 cacatacacacacgcacatgcataaa 137724
>gb|AC153644.3| Mus musculus BAC clone RP24-531A1 from 1, complete sequence Length = 166988 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 acatccacacacgcacatgcat 201 |||||||||||||||||||||| Sbjct: 15411 acatccacacacgcacatgcat 15432
>emb|AL591393.10| Human DNA sequence from clone RP11-224J22 on chromosome 9 Contains a novel gene (FLJ33868) and 2 CpG islands, complete sequence Length = 174911 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 142 aaatacttaccaagattatttattt 166 |||||||||||||| |||||||||| Sbjct: 80594 aaatacttaccaagtttatttattt 80570
>emb|Z68152.1|GHCHI2A G.hirsutum chitinase gene (2439 bp) Length = 2439 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 303 atgtcacagtagcgcttgtaaaacccgat 331 ||||||||||| | ||||||||||||||| Sbjct: 1597 atgtcacagtatctcttgtaaaacccgat 1569
>emb|BX322565.11| Zebrafish DNA sequence from clone CH211-262K18 in linkage group 24, complete sequence Length = 158981 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 tcacatccacacacgcacatgcata 202 |||||| |||||||||||||||||| Sbjct: 125189 tcacatacacacacgcacatgcata 125165
>emb|BX294098.11| Zebrafish DNA sequence from clone CH211-254P12 in linkage group 24, complete sequence Length = 152545 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 tcacatccacacacgcacatgcata 202 |||||| |||||||||||||||||| Sbjct: 66156 tcacatacacacacgcacatgcata 66180
>emb|Z68153.1|GHCHI2B G.hirsutum chitinase gene (2525 bp) Length = 2525 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 303 atgtcacagtagcgcttgtaaaacccgat 331 ||||||||||| | ||||||||||||||| Sbjct: 1647 atgtcacagtatctcttgtaaaacccgat 1619
>emb|BX294095.13| Zebrafish DNA sequence from clone CH211-248L17 in linkage group 24, complete sequence Length = 147604 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 tcacatccacacacgcacatgcata 202 |||||| |||||||||||||||||| Sbjct: 105496 tcacatacacacacgcacatgcata 105472
>ref|NM_197598.1| Oryza sativa (japonica cultivar-group) putative chitinase (OSJNBb0015I11.16), mRNA Length = 891 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggtt 280 |||||||||||||||||||| Sbjct: 863 tggttgtagcagtcgaggtt 844
>gb|AC166486.5| Mus musculus chromosome 1, clone RP23-187M9, complete sequence Length = 187098 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ccatttatttggtcataaaa 144 |||||||||||||||||||| Sbjct: 13104 ccatttatttggtcataaaa 13085
>gb|AY532766.1| Zea diploperennis isolate d8 chitinase (chiI) gene, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532765.1| Zea diploperennis isolate d7 chitinase (chiI) gene, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532764.1| Zea diploperennis isolate d6 chitinase (chiI) gene, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532763.1| Zea diploperennis isolate d5 chitinase (chiI) gene, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532762.1| Zea diploperennis isolate d5b chitinase (chiI) gene, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532761.1| Zea diploperennis isolate d4 chitinase (chiI) gene, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532760.1| Zea diploperennis isolate d3 chitinase (chiI) gene, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532759.1| Zea diploperennis isolate d2 chitinase (chiI) gene, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532758.1| Zea diploperennis isolate d1 chitinase (chiI) gene, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532757.1| Zea mays subsp. parviglumis isolate p15 chitinase (chiI) gene, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532756.1| Zea mays subsp. parviglumis isolate p14b chitinase (chiI) gene, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532755.1| Zea mays subsp. parviglumis isolate p14 chitinase (chiI) gene, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532754.1| Zea mays subsp. parviglumis isolate p13b chitinase (chiI) gene, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532753.1| Zea mays subsp. parviglumis isolate p13 chitinase (chiI) gene, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532752.1| Zea mays subsp. parviglumis isolate p12 chitinase (chiI) gene, complete cds Length = 1082 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532751.1| Zea mays subsp. parviglumis isolate p11 chitinase (chiI) gene, complete cds Length = 1081 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 906 gtcacagtatcgtttgtagaagccgatccggtcggc 871
>gb|AY532750.1| Zea mays subsp. parviglumis isolate p9 chitinase (chiI) gene, complete cds Length = 1084 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 909 gtcacagtatcgtttgtagaagccgatccggtcggc 874
>gb|AY532749.1| Zea mays subsp. parviglumis isolate p8 chitinase (chiI) gene, complete cds Length = 1081 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 906 gtcacagtatcgtttgtagaagccgatccggtcggc 871
>gb|AY532748.1| Zea mays subsp. parviglumis isolate p6 chitinase (chiI) gene, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532747.1| Zea mays subsp. parviglumis isolate p5 chitinase (chiI) gene, complete cds Length = 1089 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 906 gtcacagtatcgtttgtagaagccgatccggtcggc 871
>gb|AY532746.1| Zea mays subsp. parviglumis isolate p4 chitinase (chiI) gene, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532745.1| Zea mays subsp. parviglumis isolate p3 chitinase (chiI) gene, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532744.1| Zea mays subsp. parviglumis isolate p2 chitinase (chiI) gene, complete cds Length = 1087 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532743.1| Zea mays subsp. parviglumis isolate p1 chitinase (chiI) gene, complete cds Length = 1081 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 906 gtcacagtatcgtttgtagaagccgatccggtcggc 871
>gb|AC131725.2| Mus musculus BAC clone RP23-129H16 from chromosome 5, complete sequence Length = 203437 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 cacatccacacacgcacatgcata 202 ||||| |||||||||||||||||| Sbjct: 10245 cacatacacacacgcacatgcata 10268
>gb|AC124374.5| Mus musculus BAC clone RP24-567K8 from chromosome 5, complete sequence Length = 181395 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 cacatccacacacgcacatgcata 202 ||||| |||||||||||||||||| Sbjct: 177006 cacatacacacacgcacatgcata 176983
>gb|AC069288.7| Homo sapiens BAC clone RP11-416J17 from 7, complete sequence Length = 145709 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 cacatccacacacgcacatg 198 |||||||||||||||||||| Sbjct: 136461 cacatccacacacgcacatg 136480
>gb|AC113021.10| Mus musculus chromosome 6, clone RP23-186F2, complete sequence Length = 198397 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ccaagattatttatttgggg 170 |||||||||||||||||||| Sbjct: 82945 ccaagattatttatttgggg 82964
>emb|BX901895.15| Zebrafish DNA sequence from clone CH211-218C11 in linkage group 7, complete sequence Length = 208436 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aatatgtttataataaaagg 43 |||||||||||||||||||| Sbjct: 125720 aatatgtttataataaaagg 125739
>emb|CR931785.6| Zebrafish DNA sequence from clone DKEY-230N5 in linkage group 7, complete sequence Length = 196531 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aatatgtttataataaaagg 43 |||||||||||||||||||| Sbjct: 145929 aatatgtttataataaaagg 145948
>gb|AC121591.4| Mus musculus BAC clone RP23-289H3 from 1, complete sequence Length = 195393 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ccatttatttggtcataaaa 144 |||||||||||||||||||| Sbjct: 12989 ccatttatttggtcataaaa 13008
>emb|CR933541.6| Mouse DNA sequence from clone DN-97M20 on chromosome 11, complete sequence Length = 176646 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 cacatccacacacgcacatgcata 202 ||||| |||||||||||||||||| Sbjct: 66957 cacatgcacacacgcacatgcata 66934
>gb|AC158914.4| Mus musculus chromosome 5, clone RP24-249F11, complete sequence Length = 155216 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 cacatccacacacgcacatgcata 202 ||||| |||||||||||||||||| Sbjct: 147813 cacatacacacacgcacatgcata 147836
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 cccgtagccgatgccgaaga 303 |||||||||||||||||||| Sbjct: 399928 cccgtagccgatgccgaaga 399947
>gb|AY747625.1| Brassica rapa oleosin-like protein mRNA, partial cds Length = 813 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 atgtttataataaaaggggg 46 |||||||||||||||||||| Sbjct: 624 atgtttataataaaaggggg 643
>emb|AL596185.12| Mouse DNA sequence from clone RP23-172M21 on chromosome 11 Contains the 5' end of the Centb1 gene for centaurin beta 1, the gene for a novel protein similar to protein phosphatase 1 regulatory (inhibitor) subunit 2 Ppp1r2, a novel gene, the Gps2 gene for G protein pathway suppressor 2, the Eif5a gene for eukaryotic translation initiation factor 5A, the Ybx2 gene for Y box protein 2, the Slc2a4 gene for solute carrier family 2 (facilitated glucose transporter) member 4, a non-muscle cofilin 1 (Cfl1) pseudogene, the Cldn7 gene for claudin 7, the Rai12 gene for retinoic acid induced 12, the Dullard gene for Dullard homolog (Xenopus laevis) (novel NLI interacting factor-like phosphatase), the gene for novel PHD-finger protein JUNE1, the Dvl2 gene for dishevelled 2 dsh homolog (Drosophila), the Acadvl gene for acyl-Coenzyme A dehydrogenase very long chain, the Dlgh4 gene for discs large homolog 4 (Drosophila), the Asgr1 and Asgr2 genes for asialoglycoprotein receptor 1 and 2, a ribosomal protein L26 (Rpl26) pseudogene, the 5' end of the Mgl2 gene for macrophage galactose N-acetyl-galactosamine specific lectin 2 and nine CpG islands, complete sequence Length = 248203 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 cacatccacacacgcacatgcata 202 ||||| |||||||||||||||||| Sbjct: 74107 cacatgcacacacgcacatgcata 74084
>emb|AL591420.5| Zebrafish DNA sequence from clone BUSM1-221H6 in linkage group 7 Contains three genes for novel immune-type receptors (nitr), complete sequence Length = 51019 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aatatgtttataataaaagg 43 |||||||||||||||||||| Sbjct: 25542 aatatgtttataataaaagg 25523
>emb|AL645902.6| Mouse DNA sequence from clone RP23-19I2 on chromosome 11 Contains the gene for the likely ortholog of H. sapiens phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) (PFAS), the gene for a novel protein (1500010J02Rik), the Aurkb gene for aurora kinase B, two genes for novel proteins (2310047M10Rik and 1110004B13Rik), a guanine nucleotide binding protein (G protein) gamma 5 subunit (Gng5) pseudogene and three CpG islands, complete sequence Length = 100678 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tttataataaaagggggcga 49 |||||||||||||||||||| Sbjct: 84763 tttataataaaagggggcga 84782
>gb|AC018352.23| Homo sapiens 3 BAC RP11-124O2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153352 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 cacacacgcacatgcataaa 204 |||||||||||||||||||| Sbjct: 140880 cacacacgcacatgcataaa 140899
>gb|AC013701.6| Homo sapiens, clone RP11-22C8, complete sequence Length = 160275 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 cacatccacacacgcacatgcata 202 ||||| |||||||||||||||||| Sbjct: 85595 cacatgcacacacgcacatgcata 85572
>gb|S37032.1| oleosin napII [rapeseeds, mRNA, 810 nt] Length = 810 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 atgtttataataaaaggggg 46 |||||||||||||||||||| Sbjct: 614 atgtttataataaaaggggg 633
>gb|DQ328612.1| Brassica napus oleosin-like protein gene, complete cds Length = 2105 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 atgtttataataaaaggggg 46 |||||||||||||||||||| Sbjct: 1765 atgtttataataaaaggggg 1784
>gb|AC161378.2| Mus musculus BAC clone RP23-202A6 from chromosome 16, complete sequence Length = 219298 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 174 atcatcacatccacacacgcacatgcat 201 |||| ||||| ||||||||||||||||| Sbjct: 192642 atcaacacatacacacacgcacatgcat 192615
>gb|AC154429.4| Mus musculus BAC clone RP24-202G18 from chromosome 16, complete sequence Length = 170875 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 174 atcatcacatccacacacgcacatgcat 201 |||| ||||| ||||||||||||||||| Sbjct: 147179 atcaacacatacacacacgcacatgcat 147152
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 cgatccggtcggccaccttg 347 |||||||||||||||||||| Sbjct: 6660758 cgatccggtcggccaccttg 6660777
>emb|BX649239.1| Sminthopsis DNA sequence from clone RZPD668-232B10, complete sequence Length = 40274 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 cacatccacacacgcacatgcata 202 ||||| |||||||||||||||||| Sbjct: 25008 cacatacacacacgcacatgcata 24985
>emb|X58000.1|BNOLEOSIN B.napus mRNA for major oleosin, nap-II Length = 810 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 atgtttataataaaaggggg 46 |||||||||||||||||||| Sbjct: 614 atgtttataataaaaggggg 633
>emb|AL954849.14| Zebrafish DNA sequence from clone DKEY-7N10 in linkage group 7, complete sequence Length = 162939 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aatatgtttataataaaagg 43 |||||||||||||||||||| Sbjct: 25634 aatatgtttataataaaagg 25615
>gb|AC124225.13| Mus musculus chromosome 16, clone RP23-83P23, complete sequence Length = 157891 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 174 atcatcacatccacacacgcacatgcat 201 |||| ||||| ||||||||||||||||| Sbjct: 147018 atcaacacatacacacacgcacatgcat 147045
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 cgatccggtcggccaccttg 347 |||||||||||||||||||| Sbjct: 1773332 cgatccggtcggccaccttg 1773313
>emb|AL671901.14| Mouse DNA sequence from clone RP23-238B14 on chromosome X, complete sequence Length = 201821 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 tcacatccacacacgcacatgcataaac 205 |||||| ||||||| ||||||||||||| Sbjct: 108892 tcacatgcacacacacacatgcataaac 108865
>emb|AL671885.13| Mouse DNA sequence from clone RP23-132C19 on chromosome X, complete sequence Length = 154019 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 aggacccaatcttatgatctcact 231 |||||||| ||||||||||||||| Sbjct: 84820 aggacccactcttatgatctcact 84843
>emb|AL773600.4| Mouse DNA sequence from clone RP23-79B20 on chromosome 4, complete sequence Length = 198952 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 tttatttgggggtgatcatcacat 183 ||||||| |||||||||||||||| Sbjct: 160359 tttattttggggtgatcatcacat 160382
>gb|L00973.1|MZECHITC Zea mays acidic class I chitinase mRNA, complete cds Length = 1128 Score = 40.1 bits (20), Expect = 4.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 305 gtcacagtagcgcttgtaaaacccgatccggtcggc 340 ||||||||| || ||||| || |||||||||||||| Sbjct: 921 gtcacagtatcgtttgtagaagccgatccggtcggc 886
>gb|AC133010.2| Homo sapiens chromosome 3 clone RP13-597L11, complete sequence Length = 165036 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 cacacacgcacatgcataaa 204 |||||||||||||||||||| Sbjct: 129690 cacacacgcacatgcataaa 129671
>gb|U02286.1|OSU02286 Oryza sativa IR58 chitinase mRNA, complete cds Length = 1051 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tggttgtagcagtcgaggtt 280 |||||||||||||||||||| Sbjct: 975 tggttgtagcagtcgaggtt 956 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,405,062 Number of Sequences: 3902068 Number of extensions: 3405062 Number of successful extensions: 71765 Number of sequences better than 10.0: 140 Number of HSP's better than 10.0 without gapping: 140 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71330 Number of HSP's gapped (non-prelim): 422 length of query: 371 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 349 effective length of database: 17,147,199,772 effective search space: 5984372720428 effective search space used: 5984372720428 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
