ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet02g11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1COL1_ARATH (O50055) Zinc finger protein CONSTANS-LIKE 1 102 3e-22
2COL2_ARATH (Q96502) Zinc finger protein CONSTANS-LIKE 2 100 1e-21
3COL5_ARATH (Q9FHH8) Zinc finger protein CONSTANS-LIKE 5 93 2e-19
4CONS_ARATH (Q39057) Zinc finger protein CONSTANS 89 5e-18
5COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4 87 2e-17
6COL3_ARATH (Q9SK53) Zinc finger protein CONSTANS-LIKE 3 82 4e-16
7COL14_ARATH (O22800) Zinc finger protein CONSTANS-LIKE 14 64 1e-10
8COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16 62 4e-10
9COL15_ARATH (Q9C7E8) Zinc finger protein CONSTANS-LIKE 15 62 7e-10
10COL13_ARATH (O82256) Zinc finger protein CONSTANS-LIKE 13 62 7e-10
11COL8_ARATH (Q9M9B3) Putative zinc finger protein CONSTANS-LIKE 8 61 9e-10
12COL6_ARATH (Q8LG76) Zinc finger protein CONSTANS-LIKE 6 61 9e-10
13COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7 61 1e-09
14COL9_ARATH (Q9SSE5) Zinc finger protein CONSTANS-LIKE 9 58 1e-08
15PRR73_ORYSA (Q689G4) Two-component response regulator-like PRR73... 55 5e-08
16COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10 55 9e-08
17COL12_ARATH (Q9LJ44) Putative zinc finger protein CONSTANS-LIKE 12 54 2e-07
18PRR95_ORYSA (Q689G6) Two-component response regulator-like PRR95... 53 3e-07
19APRR5_ARATH (Q6LA42) Two-component response regulator-like APRR5... 53 3e-07
20APRR9_ARATH (Q8L500) Two-component response regulator-like APRR9... 53 3e-07
21APRR7_ARATH (Q93WK5) Two-component response regulator-like APRR7... 52 4e-07
22COL11_ARATH (O23379) Putative zinc finger protein CONSTANS-LIKE 11 52 6e-07
23PRR37_ORYSA (Q689G8) Two-component response regulator-like PRR37... 52 6e-07
24APRR3_ARATH (Q9LVG4) Two-component response regulator-like APRR3... 52 6e-07
25PRR1_ORYSA (Q689G9) Two-component response regulator-like PRR1 (... 51 1e-06
26APRR1_ARATH (Q9LKL2) Two-component response regulator-like APRR1... 49 5e-06
27GAT27_ARATH (Q8GXL7) GATA transcription factor 27 (ZIM-like 1 pr... 42 6e-04
28GAT25_ARATH (Q8H1G0) GATA transcription factor 25 (ZIM-like 2 pr... 39 0.004
29GAT26_ARATH (Q9LRH6) GATA transcription factor 26 (ZIM protein) 35 0.072
30RSRC1_RAT (Q5PPJ2) Arginine/serine-rich coiled coil protein 1 31 1.4
31RSRC1_MOUSE (Q9DBU6) Arginine/serine-rich coiled coil protein 1 31 1.4
32SAHH3_MOUSE (Q68FL4) Putative adenosylhomocysteinase 3 (EC 3.3.1... 29 3.9
33SAHH3_HUMAN (Q96HN2) Putative adenosylhomocysteinase 3 (EC 3.3.1... 29 3.9
34SYK_CHLTE (Q8KCM7) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 28 6.7
35PURA1_PHOLL (Q7N8D4) Adenylosuccinate synthetase 1 (EC 6.3.4.4) ... 28 6.7
36YR186_MIMIV (Q5URB4) Putative transposase R186 28 6.7

>COL1_ARATH (O50055) Zinc finger protein CONSTANS-LIKE 1|
          Length = 355

 Score =  102 bits (255), Expect = 3e-22
 Identities = 52/79 (65%), Positives = 59/79 (74%)
 Frame = -2

Query: 420 PQFMGMAMDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADADLEVD 241
           P  M    DREARV RYREK+KMR+FEKTIRYASRKAYAE RPRIKGRFAK+ D D E +
Sbjct: 277 PAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEAN 336

Query: 240 QYFSAAALSDSSCGVVPTF 184
           Q FS     D+  G+VP+F
Sbjct: 337 QAFSTMITFDTGYGIVPSF 355



to top

>COL2_ARATH (Q96502) Zinc finger protein CONSTANS-LIKE 2|
          Length = 347

 Score =  100 bits (249), Expect = 1e-21
 Identities = 46/72 (63%), Positives = 60/72 (83%)
 Frame = -2

Query: 399 MDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADADLEVDQYFSAAA 220
           M+REARV RYREK+K R+F+KTIRYASRKAYAE RPRIKGRFAKR + + E ++ FS + 
Sbjct: 276 MEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSL 335

Query: 219 LSDSSCGVVPTF 184
           +S++  G+VP+F
Sbjct: 336 MSETGYGIVPSF 347



to top

>COL5_ARATH (Q9FHH8) Zinc finger protein CONSTANS-LIKE 5|
          Length = 355

 Score = 93.2 bits (230), Expect = 2e-19
 Identities = 50/76 (65%), Positives = 60/76 (78%), Gaps = 3/76 (3%)
 Frame = -2

Query: 402 AMDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADA---DLEVDQYF 232
           +MDREARV RYREKRK R+FEKTIRYASRKAYAE+RPRIKGRFAKR +    D+ +   +
Sbjct: 282 SMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETENDDIFLSHVY 341

Query: 231 SAAALSDSSCGVVPTF 184
           ++AA   +  GVVPTF
Sbjct: 342 ASAA--HAQYGVVPTF 355



to top

>CONS_ARATH (Q39057) Zinc finger protein CONSTANS|
          Length = 373

 Score = 88.6 bits (218), Expect = 5e-18
 Identities = 46/72 (63%), Positives = 57/72 (79%)
 Frame = -2

Query: 399 MDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADADLEVDQYFSAAA 220
           MDREARV RYREKRK R+FEKTIRYASRKAYAE RPR+ GRFAKR + + E +Q F+   
Sbjct: 304 MDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR-EIEAE-EQGFNTML 361

Query: 219 LSDSSCGVVPTF 184
           + ++  G+VP+F
Sbjct: 362 MYNTGYGIVPSF 373



to top

>COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4|
          Length = 362

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 47/71 (66%), Positives = 51/71 (71%)
 Frame = -2

Query: 396 DREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADADLEVDQYFSAAAL 217
           +REARV RYREKRK R+FEKTIRYASRKAYAE RPRIKGRFAKR D +   D        
Sbjct: 294 EREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGGIF 353

Query: 216 SDSSCGVVPTF 184
             S  G+VPTF
Sbjct: 354 --SGFGLVPTF 362



to top

>COL3_ARATH (Q9SK53) Zinc finger protein CONSTANS-LIKE 3|
          Length = 294

 Score = 82.4 bits (202), Expect = 4e-16
 Identities = 40/47 (85%), Positives = 43/47 (91%)
 Frame = -2

Query: 396 DREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADA 256
           +REARV RYREKRK R+FEKTIRYASRKAYAE RPRIKGRFAKR D+
Sbjct: 228 EREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDS 274



to top

>COL14_ARATH (O22800) Zinc finger protein CONSTANS-LIKE 14|
          Length = 402

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 29/49 (59%), Positives = 38/49 (77%)
 Frame = -2

Query: 405 MAMDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRAD 259
           MA +R+  + RY+EK+K RR++KTIRY +RKA AETR R+KGRF K  D
Sbjct: 353 MAQNRDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKGRFVKATD 401



to top

>COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16|
          Length = 417

 Score = 62.4 bits (150), Expect = 4e-10
 Identities = 31/44 (70%), Positives = 33/44 (75%)
 Frame = -2

Query: 393 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRA 262
           REARV RYREKR+ R F K IRY  RK  AE RPR+KGRF KRA
Sbjct: 361 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 404



to top

>COL15_ARATH (Q9C7E8) Zinc finger protein CONSTANS-LIKE 15|
          Length = 433

 Score = 61.6 bits (148), Expect = 7e-10
 Identities = 28/50 (56%), Positives = 39/50 (78%)
 Frame = -2

Query: 405 MAMDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADA 256
           +A +R   + RY+EKRK RR++KTIRY SRKA A+TR R++GRF K ++A
Sbjct: 381 LAQNRGDAMQRYKEKRKTRRYDKTIRYESRKARADTRLRVRGRFVKASEA 430



to top

>COL13_ARATH (O82256) Zinc finger protein CONSTANS-LIKE 13|
          Length = 332

 Score = 61.6 bits (148), Expect = 7e-10
 Identities = 28/48 (58%), Positives = 38/48 (79%)
 Frame = -2

Query: 402 AMDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRAD 259
           +++R + + RY+EK+K RR+EK IRY SRK  AE+R RI+GRFAK AD
Sbjct: 284 SLERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAKAAD 331



to top

>COL8_ARATH (Q9M9B3) Putative zinc finger protein CONSTANS-LIKE 8|
          Length = 313

 Score = 61.2 bits (147), Expect = 9e-10
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = -2

Query: 396 DREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRA 262
           +REARV RYR+KRK R FEK IRY  RK  A+ RPR+KGRF +R+
Sbjct: 264 EREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 308



to top

>COL6_ARATH (Q8LG76) Zinc finger protein CONSTANS-LIKE 6|
          Length = 406

 Score = 61.2 bits (147), Expect = 9e-10
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = -2

Query: 393 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRA 262
           REARV RYREKR+ R F K IRY  RK  AE RPR+KGRF KR+
Sbjct: 357 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRS 400



to top

>COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7|
          Length = 392

 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = -2

Query: 396 DREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKR 265
           +REARV RY+EKR+ R F K IRY  RK  AE RPRIKGRF KR
Sbjct: 344 EREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKR 387



to top

>COL9_ARATH (Q9SSE5) Zinc finger protein CONSTANS-LIKE 9|
          Length = 372

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 26/49 (53%), Positives = 36/49 (73%)
 Frame = -2

Query: 402 AMDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADA 256
           ++ R   V RY+EK+K R+F+K +RYASRKA A+ R R+KGRF K  +A
Sbjct: 312 SVTRNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEA 360



to top

>PRR73_ORYSA (Q689G4) Two-component response regulator-like PRR73|
           (Pseudo-response regulator 73) (OsPRR73)
          Length = 767

 Score = 55.5 bits (132), Expect = 5e-08
 Identities = 24/52 (46%), Positives = 38/52 (73%)
 Frame = -2

Query: 393 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADADLEVDQ 238
           REA ++++R+KRK+R F K +RY SRK  AE RPRI+G+F +++  + +  Q
Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQEDQAGQ 763



to top

>COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10|
          Length = 373

 Score = 54.7 bits (130), Expect = 9e-08
 Identities = 25/49 (51%), Positives = 33/49 (67%)
 Frame = -2

Query: 402 AMDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADA 256
           A  R   V RY+EK+K R+F+K +RY SRK  A+ R R+KGRF K  +A
Sbjct: 313 ATTRNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVKSGEA 361



to top

>COL12_ARATH (Q9LJ44) Putative zinc finger protein CONSTANS-LIKE 12|
          Length = 337

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 25/40 (62%), Positives = 30/40 (75%)
 Frame = -2

Query: 375 RYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADA 256
           RY+EK+  R F K IRYASRKA A+TR R+KGRF K  D+
Sbjct: 286 RYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVKAGDS 325



to top

>PRR95_ORYSA (Q689G6) Two-component response regulator-like PRR95|
           (Pseudo-response regulator 95) (OsPRR95)
          Length = 623

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 24/43 (55%), Positives = 33/43 (76%)
 Frame = -2

Query: 393 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKR 265
           REA ++++R KRK R FEK +RY SRK  AE RPR+KG+F ++
Sbjct: 574 REAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQ 616



to top

>APRR5_ARATH (Q6LA42) Two-component response regulator-like APRR5|
           (Pseudo-response regulator 5)
          Length = 558

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 24/49 (48%), Positives = 35/49 (71%)
 Frame = -2

Query: 402 AMDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADA 256
           ++ REA + ++R KRK R +EK +RY SRK  AE RPRIKG+F ++  +
Sbjct: 506 SLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQVQS 554



to top

>APRR9_ARATH (Q8L500) Two-component response regulator-like APRR9|
           (Pseudo-response regulator 9)
          Length = 468

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 24/47 (51%), Positives = 34/47 (72%)
 Frame = -2

Query: 393 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADAD 253
           REA + ++R KRK R F+K +RY SRK  AE RPR+KG+F +  ++D
Sbjct: 417 REAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVNSD 463



to top

>APRR7_ARATH (Q93WK5) Two-component response regulator-like APRR7|
           (Pseudo-response regulator 7)
          Length = 727

 Score = 52.4 bits (124), Expect = 4e-07
 Identities = 23/46 (50%), Positives = 33/46 (71%)
 Frame = -2

Query: 393 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADA 256
           REA + ++R+KRK R F K +RY SRK  AE RPR++G+F ++  A
Sbjct: 669 REAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAA 714



to top

>COL11_ARATH (O23379) Putative zinc finger protein CONSTANS-LIKE 11|
          Length = 330

 Score = 52.0 bits (123), Expect = 6e-07
 Identities = 24/45 (53%), Positives = 31/45 (68%)
 Frame = -2

Query: 393 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRAD 259
           R+    RY++K+  R F K IRYASRKA A+TR R+KGRF K  +
Sbjct: 276 RDEAKKRYKQKKSKRMFGKQIRYASRKARADTRKRVKGRFVKSGE 320



to top

>PRR37_ORYSA (Q689G8) Two-component response regulator-like PRR37|
           (Pseudo-response regulator 37) (OsPRR37)
          Length = 742

 Score = 52.0 bits (123), Expect = 6e-07
 Identities = 24/47 (51%), Positives = 33/47 (70%)
 Frame = -2

Query: 393 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRADAD 253
           R A V ++R+KRK R F K +RY SRK  AE RPR++G+F ++A  D
Sbjct: 682 RVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQAVQD 728



to top

>APRR3_ARATH (Q9LVG4) Two-component response regulator-like APRR3|
           (Pseudo-response regulator 3)
          Length = 495

 Score = 52.0 bits (123), Expect = 6e-07
 Identities = 24/45 (53%), Positives = 32/45 (71%)
 Frame = -2

Query: 393 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRAD 259
           REA + ++R KRK R FEK +RY SRK  AE RP +KG+F ++ D
Sbjct: 442 REAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRKRD 486



to top

>PRR1_ORYSA (Q689G9) Two-component response regulator-like PRR1|
           (Pseudo-response regulator 1) (OsPRR1)
          Length = 518

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 22/45 (48%), Positives = 34/45 (75%)
 Frame = -2

Query: 393 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRAD 259
           R A + ++R KRK R F+K +RY +RK  AETRPR++G+F ++A+
Sbjct: 443 RAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQAN 487



to top

>APRR1_ARATH (Q9LKL2) Two-component response regulator-like APRR1|
           (Pseudo-response regulator 1) (Timing of CAB expression
           1) (ABI3-interacting protein 1)
          Length = 618

 Score = 48.9 bits (115), Expect = 5e-06
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = -2

Query: 393 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKR 265
           RE  + ++R KR  R F+K IRY +RK  AE RPR+KG+F ++
Sbjct: 533 REEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRK 575



to top

>GAT27_ARATH (Q8GXL7) GATA transcription factor 27 (ZIM-like 1 protein)|
          Length = 297

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
 Frame = -2

Query: 393 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRF--AKRADAD 253
           R A + R+REKRK R F+KTIRY  RK  A    R KG+F  AK ++ D
Sbjct: 143 RLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDD 191



to top

>GAT25_ARATH (Q8H1G0) GATA transcription factor 25 (ZIM-like 2 protein)|
          Length = 302

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 21/40 (52%), Positives = 25/40 (62%)
 Frame = -2

Query: 393 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRF 274
           R A + R+REKRK R F+K IRY  RK  A    R KG+F
Sbjct: 147 RLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQF 186



to top

>GAT26_ARATH (Q9LRH6) GATA transcription factor 26 (ZIM protein)|
          Length = 309

 Score = 35.0 bits (79), Expect = 0.072
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
 Frame = -2

Query: 393 REARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRF--------AKRADADLEVDQ 238
           R   + R+R+KR  R FEK +RY  R+  A    R KG+F        A  +  D +  Q
Sbjct: 146 RAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTDGAYNSGTDQDSAQ 205

Query: 237 YFSAAALSDSSCGV 196
             +   +S + CG+
Sbjct: 206 DDAHPEISCTHCGI 219



to top

>RSRC1_RAT (Q5PPJ2) Arginine/serine-rich coiled coil protein 1|
          Length = 334

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -2

Query: 396 DREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGR 277
           DR+ R H Y E+R+ RR   +  Y SR+  + +R R +G+
Sbjct: 54  DRQPRSHSY-ERRRRRRSSSSSSYGSRRKRSRSRSRGRGK 92



to top

>RSRC1_MOUSE (Q9DBU6) Arginine/serine-rich coiled coil protein 1|
          Length = 334

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -2

Query: 396 DREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGR 277
           DR+ R H Y E+R+ RR   +  Y SR+  + +R R +G+
Sbjct: 54  DRQLRSHSY-ERRRRRRSSSSSSYGSRRKRSRSRSRGRGK 92



to top

>SAHH3_MOUSE (Q68FL4) Putative adenosylhomocysteinase 3 (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase 3) (AdoHcyase 3)
          Length = 613

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 351 RRFEKTIRYASRKAYAETRP-RIKGRFAKRADADLEVDQYFSAAALSDSS 205
           R  +K I++A +K     RP +I  R   R+ +    D Y SAA+ +DSS
Sbjct: 119 RTVKKQIQFADQKQEFNKRPTKIGRRSLSRSISQSSTDSYSSAASYTDSS 168



to top

>SAHH3_HUMAN (Q96HN2) Putative adenosylhomocysteinase 3 (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase 3) (AdoHcyase 3)
          Length = 611

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 351 RRFEKTIRYASRKAYAETRP-RIKGRFAKRADADLEVDQYFSAAALSDSS 205
           R  +K I++A +K     RP +I  R   R+ +    D Y SAA+ +DSS
Sbjct: 117 RTVKKQIQFADQKQEFNKRPTKIGRRSLSRSISQSSTDSYSSAASYTDSS 166



to top

>SYK_CHLTE (Q8KCM7) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)|
           (LysRS)
          Length = 511

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/61 (22%), Positives = 26/61 (42%)
 Frame = -2

Query: 342 EKTIRYASRKAYAETRPRIKGRFAKRADADLEVDQYFSAAALSDSSCGVVPTF*GGSVER 163
           ++ +RY  R       P ++G F KR      +  YF++    +    ++    GG+  R
Sbjct: 171 DRELRYRQRYVDLIVNPEVRGTFIKRTKIVALMRNYFASNGWLEVETPILQPIYGGAAAR 230

Query: 162 P 160
           P
Sbjct: 231 P 231



to top

>PURA1_PHOLL (Q7N8D4) Adenylosuccinate synthetase 1 (EC 6.3.4.4) (IMP--aspartate|
           ligase 1) (AdSS 1) (AMPSase 1)
          Length = 419

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = -1

Query: 181 GRLGGETMSVPPSMVDRSTPACWLALLNLPNILNFTGGIKASPVNTKYSIMERCQIDL 8
           G L G    +P S+  ++   C  AL++LP ++     IK   +++   I  RC I L
Sbjct: 45  GNLRGSFSQLPASLNKKNLYICQGALISLPILVKEIDFIKKEDIDSHIFIDPRCHIVL 102



to top

>YR186_MIMIV (Q5URB4) Putative transposase R186|
          Length = 482

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = -2

Query: 411 MGMAMDREARVHRYREKRKMRRFEKTIRYASRKAYAETRPRIKGRFAKRA 262
           M   +DR   +   R+KRK R+ ++ +R +  K Y + R RIK    K A
Sbjct: 298 MWRKIDRINFLLHNRKKRKKRKNDRRLRKSLAKYYRKIRQRIKDLHTKTA 347


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,480,797
Number of Sequences: 219361
Number of extensions: 777197
Number of successful extensions: 2286
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2284
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top