| Clone Name | rbaet02d07 |
|---|---|
| Clone Library Name | barley_pub |
>DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 393 Score = 154 bits (390), Expect = 8e-38 Identities = 77/86 (89%), Positives = 81/86 (94%), Gaps = 2/86 (2%) Frame = -1 Query: 458 DAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGENVESGHPLVKE 279 DAEAYDCNN+VEQELPCGGVLIYQSF ANEE+AVSAGSPRSVFHCF ENVESGHPLVKE Sbjct: 310 DAEAYDCNNVVEQELPCGGVLIYQSFAANEELAVSAGSPRSVFHCF--ENVESGHPLVKE 367 Query: 278 GKLANLLAWRAEEDSLEE--GAVLCE 207 GKLANLLAWRAEE+SLEE GA+LCE Sbjct: 368 GKLANLLAWRAEEESLEEGTGALLCE 393
>DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 398 Score = 104 bits (260), Expect = 9e-23 Identities = 52/78 (66%), Positives = 62/78 (79%) Frame = -1 Query: 458 DAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGENVESGHPLVKE 279 +A+AY CNN+VEQELPCGG+LIYQSF A E+V V+ GSP+SV HCFE EN+ + P VKE Sbjct: 317 NADAYKCNNMVEQELPCGGLLIYQSFDATEDVPVAVGSPKSVLHCFEAENMVNPAP-VKE 375 Query: 278 GKLANLLAWRAEEDSLEE 225 GKL NLL W ED+LEE Sbjct: 376 GKLGNLLPW--GEDALEE 391
>DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 400 Score = 101 bits (251), Expect = 1e-21 Identities = 51/80 (63%), Positives = 61/80 (76%), Gaps = 1/80 (1%) Frame = -1 Query: 455 AEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGENVESG-HPLVKE 279 AE YDCNN+VEQELP GG+L+YQSF A E+ A SP+SVFHCF+GENVES P+ K+ Sbjct: 318 AEVYDCNNMVEQELPGGGLLVYQSFCAAEDAV--ATSPKSVFHCFDGENVESAPPPMKKD 375 Query: 278 GKLANLLAWRAEEDSLEEGA 219 KLANLL W E D++EE A Sbjct: 376 YKLANLLCWEEEADAMEEKA 395
>DCAM_VICFA (Q9M4D8) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 353 Score = 33.9 bits (76), Expect = 0.20 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = -1 Query: 458 DAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGENVE 303 D + Y C+ Q L G ++YQ F A GSPRS C++ E+ E Sbjct: 305 DVKGYCCDEKSHQGLGMSGSVVYQKFVK----ASDCGSPRSTLKCWKDEDEE 352
>DCAM_PEA (Q43820) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 353 Score = 31.6 bits (70), Expect = 1.0 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = -1 Query: 458 DAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGENVE 303 D + Y C Q L G ++YQ F GSPRS C++ E+ E Sbjct: 305 DVKGYCCEEKSHQGLGMSGSVVYQKFLKTS----YCGSPRSTLKCWKDEDEE 352
>DCAM_IPONI (Q96471) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 362 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = -1 Query: 458 DAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGEN 309 D + Y C + L GG ++Y FT+ S GSPRS C EN Sbjct: 307 DVKGYACGERSYEALGKGGSIMYCGFTSTG----SCGSPRSTLLCCWSEN 352
>DCAM_IPOBA (Q9M6K1) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 362 Score = 30.4 bits (67), Expect = 2.3 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = -1 Query: 458 DAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGEN 309 D + Y C + L GG ++Y FT+ S GSPRS C EN Sbjct: 307 DVKGYACGERSYEGLNKGGSIMYCGFTSTG----SCGSPRSTLLCCWSEN 352
>SMI1_YARLI (Q6CDX0) KNR4/SMI1 homolog| Length = 713 Score = 28.9 bits (63), Expect = 6.6 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = -1 Query: 356 SAGSPRSVFHCFEGENVESGHPLVKEGKLANLLAWRAEEDSLEEGAV 216 +AGSP S G P+ + N+ +W A +DS+ EGAV Sbjct: 260 NAGSPNSS---------TPGSPVASVARQKNISSWLASQDSVPEGAV 297
>BSL3_ARATH (Q9SHS7) Serine/threonine-protein phosphatase BSL3 (EC 3.1.3.16)| (BSU1-like protein 3) Length = 715 Score = 28.5 bits (62), Expect = 8.6 Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 7/85 (8%) Frame = +3 Query: 204 SLAQHRALLQRILLRPPCEQVGKLAFLDQRVAALHILALEAVEDG-----PGRPGGDSNL 368 S A H A PP G+ F D+R L A +AV G P P G +L Sbjct: 301 SAASHAAAAAAATNTPPGRSPGRYGFSDERTGELPESAPDAVVLGSPVAPPATPSGKPSL 360 Query: 369 FI--RGKALVDEDAPAGELLLHDVV 437 + A+ + PAG L H V Sbjct: 361 SLIKPDSAVPNSVIPAGVRLHHRAV 385 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,466,006 Number of Sequences: 219361 Number of extensions: 1024958 Number of successful extensions: 3034 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2961 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3030 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)