ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet02d02 |
|---|---|
| Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 260 bits (665), Expect = 1e-69 Identities = 117/125 (93%), Positives = 121/125 (96%) Frame = -3 Query: 469 GGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFGWEGSWNEWT 290 GGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESD CNQN GWEGSW++WT Sbjct: 180 GGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDKWCNQNLGWEGSWDKWT 239 Query: 289 AAYPATRFYVGLTADDKSYQWVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSL 110 AAYPATRFYVGLTADDKS+QWVHPKNVYY VAPV+QKKDNYGGIMLWDRYFDKQTNYSSL Sbjct: 240 AAYPATRFYVGLTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSSL 299 Query: 109 IKYYA 95 IKYYA Sbjct: 300 IKYYA 304
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 112 bits (280), Expect = 5e-25 Identities = 59/126 (46%), Positives = 77/126 (61%), Gaps = 6/126 (4%) Frame = -3 Query: 454 PLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNF----GWEGSWNEWTA 287 P+ LTATVRC +P + +AL T +FER+HVR Y+ D C+ N G WN+WTA Sbjct: 181 PVRLTATVRCAFPDP-RMKKALDTKLFERIHVRFYD-DATCSYNHAGLAGVMAQWNKWTA 238 Query: 286 AYPATRFYVGLTADDK--SYQWVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSS 113 YP + Y+GL A + V K +YY + P QK NYGGIMLWDR++DKQT Y Sbjct: 239 RYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGK 298 Query: 112 LIKYYA 95 +KY+A Sbjct: 299 TVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 96.7 bits (239), Expect = 3e-20 Identities = 46/111 (41%), Positives = 70/111 (63%), Gaps = 1/111 (0%) Frame = -3 Query: 445 LTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFGWEGSWNEWTAAYPATRF 266 LTAT RC YP + +ALATG+F R+HVR + D C + + SW +W AA+P ++ Sbjct: 181 LTATTRCSYPDH-RLEKALATGVFARIHVRMF-GDEQCTMSPRY--SWEKWAAAFPGSKV 236 Query: 265 YVGLTAD-DKSYQWVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYS 116 Y+GL A ++ W+ K++YY + + NYGG+ ++DRYFDK+ NY+ Sbjct: 237 YIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 75.9 bits (185), Expect = 5e-14 Identities = 46/125 (36%), Positives = 70/125 (56%), Gaps = 6/125 (4%) Frame = -3 Query: 460 GKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFGWEG----SWNEW 293 G+ ++LTA +C +P G AL TG+F+ V V+ Y + C + G SWN W Sbjct: 176 GRKVYLTAAPQCPFPDKVP-GTALNTGLFDYVWVQFYNNPP-CQYSSGNTNNLLNSWNRW 233 Query: 292 TAAYPATRFYVGLTADDKSY-QWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNY 119 T++ +T ++GL A + + P NV S + PV ++ YGG+MLW +Y+D Q+ Y Sbjct: 234 TSSINSTGSFMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGY 293 Query: 118 SSLIK 104 SS IK Sbjct: 294 SSSIK 298
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 74.3 bits (181), Expect = 1e-13 Identities = 52/131 (39%), Positives = 70/131 (53%), Gaps = 9/131 (6%) Frame = -3 Query: 469 GGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDN----GCNQNFGWEGSW 302 G GK L+LTA +C +P G AL TG+F+ V V+ Y + ++NF + W Sbjct: 168 GQQGKKLYLTAAPQCPFPDKLLNG-ALQTGLFDYVWVQFYNNPECEFMSNSENF--KRRW 224 Query: 301 NEWTAAYPATRFYVGL----TADDKSYQWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYF 137 N+WT+ PA + Y+GL TA Y PK V S V P + YGG+MLW+R F Sbjct: 225 NQWTSI-PAKKLYIGLPAAKTAAGNGYI---PKQVLMSQVLPFLKGSSKYGGVMLWNRKF 280 Query: 136 DKQTNYSSLIK 104 D Q YSS I+ Sbjct: 281 DVQCGYSSAIR 291
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 72.4 bits (176), Expect = 5e-13 Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 6/124 (4%) Frame = -3 Query: 460 GKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFG----WEGSWNEW 293 GK ++LTA +C +P ++G AL TG+F+ V V+ Y + C + G SWN W Sbjct: 174 GKKVYLTAAPQCPFPDR-YLGTALNTGLFDYVWVQFYNNPP-CQYSSGNINNIINSWNRW 231 Query: 292 TAAYPATRFYVGLTADDKSYQ--WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNY 119 T + A + ++GL A ++ +V P + + P +K YGG+MLW +++D + Y Sbjct: 232 TTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGY 291 Query: 118 SSLI 107 SS I Sbjct: 292 SSSI 295
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 68.2 bits (165), Expect = 1e-11 Identities = 43/124 (34%), Positives = 70/124 (56%), Gaps = 8/124 (6%) Frame = -3 Query: 451 LHLTATVRCGYPPAAHVGRALATGIFERVHVRTYES-----DNGCNQNFGWEGSWNEWTA 287 ++L+A +C YP A H+ A+ TG+F+ V V+ Y + NG N +WN+WT+ Sbjct: 171 VYLSAAPQCPYPDA-HLDSAIQTGLFDYVWVQFYNNPQCQYSNGNINNL--VNAWNQWTS 227 Query: 286 AYPATRFYVGLTADDKSYQ--WVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYS 116 + A + ++G+ A D + + P +V S V P + YGG+M+WDR+ D Q+ YS Sbjct: 228 SQ-AKQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYS 286 Query: 115 SLIK 104 + IK Sbjct: 287 NAIK 290
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 68.2 bits (165), Expect = 1e-11 Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 7/125 (5%) Frame = -3 Query: 460 GKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYES-----DNGCNQNFGWEGSWNE 296 G+ ++LT +C +P +G AL T F+ V ++ Y + +G QN SWN+ Sbjct: 177 GRKIYLTGAPQCPFPDRL-MGSALNTKRFDYVWIQFYNNPPCSYSSGNTQNLF--DSWNK 233 Query: 295 WTAAYPATRFYVGLTADDKSYQ--WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTN 122 WT + A +F++GL A ++ ++ P + + P +K YGG+MLW +++D + Sbjct: 234 WTTSIAAQKFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNG 293 Query: 121 YSSLI 107 YSS I Sbjct: 294 YSSSI 298
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 62.4 bits (150), Expect = 6e-10 Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 9/123 (7%) Frame = -3 Query: 445 LTATVRCGYPPAAHVGRALATGIFERVHVRTYES------DNGCNQNFGWEGSWNEWTAA 284 L+A +C P A H+ A+ TG+F+ V V+ Y + DN N SWN+WTA Sbjct: 174 LSAAPQCPIPDA-HLDAAIKTGLFDSVWVQFYNNPPCMFADNADNLL----SSWNQWTA- 227 Query: 283 YPATRFYVGLTADDKSYQ--WVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSS 113 +P ++ Y+GL A ++ P +V S V P + NYGG+MLW + FD YS Sbjct: 228 FPTSKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFD--NGYSD 285 Query: 112 LIK 104 IK Sbjct: 286 SIK 288
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 61.6 bits (148), Expect = 1e-09 Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 6/126 (4%) Frame = -3 Query: 466 GPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFGWEG----SWN 299 G L LTA +C P A H+ A+ TG+F+ V V+ Y + C + G SWN Sbjct: 172 GFNSQLLLTAAPQCPIPDA-HLDTAIKTGLFDIVWVQFYNNPP-CQYSSGNTNDLISSWN 229 Query: 298 EWTAAYPATRFYVGLTADDKSY-QWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQT 125 +WT++ A + ++G+ A + P +V S V P + YGG+MLWDR+ D Q+ Sbjct: 230 QWTSSQ-AKQLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQS 288 Query: 124 NYSSLI 107 YS I Sbjct: 289 GYSGAI 294
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 56.6 bits (135), Expect = 3e-08 Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 5/123 (4%) Frame = -3 Query: 457 KPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFGWEG---SWNEWTA 287 K ++L+A +C P A+ + A+ATG+F+ V V+ Y + C + + SWN+WT Sbjct: 173 KTVYLSAAPQCPLPDAS-LSTAIATGLFDYVWVQFYNNPP-CQYDTSADNLLSSWNQWTT 230 Query: 286 AYPATRFYVGLTAD-DKSYQWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSS 113 A + ++GL A D + P + S V P + YGG+MLW + +D + YSS Sbjct: 231 VQ-ANQIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD--SGYSS 287 Query: 112 LIK 104 IK Sbjct: 288 AIK 290
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 55.1 bits (131), Expect = 9e-08 Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 6/124 (4%) Frame = -3 Query: 457 KPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFG----WEGSWNEWT 290 + ++LTA +C +P G AL+TG+F+ V V+ Y + C + G + WN+W Sbjct: 170 RKVYLTAAPQCPFPDTWLNG-ALSTGLFDYVWVQFYNNPP-CQYSGGSADNLKNYWNQWN 227 Query: 289 AAYPATRFYVGL-TADDKSYQWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYS 116 A A + ++GL A + P +V S V P+ YGG+MLW +++D YS Sbjct: 228 AIQ-AGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NGYS 284 Query: 115 SLIK 104 S IK Sbjct: 285 SAIK 288
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 42.7 bits (99), Expect = 5e-04 Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 11/116 (9%) Frame = -3 Query: 415 PAAHVGRALATGIFERVHVRTYESDNGCNQNFG----WEGSWNEWT-AAYPATR-FYVGL 254 P ++ A+ T F+ + VR Y +D C + G +W WT + YP + ++ L Sbjct: 193 PDEYLDNAIQTRHFDYIFVRFY-NDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLEL 251 Query: 253 TADDKSYQ---WVHPKNVYYSVAP-VSQKKDNYGGIMLWDRYFDKQTNYS-SLIKY 101 A + ++ P + V P + + Y GI LW+R DK+T YS ++I+Y Sbjct: 252 PASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 32.7 bits (73), Expect = 0.48 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Frame = -3 Query: 439 ATVRCGYPPAAHVGRALATGIFERVHVRTYE---SDNGCNQNFGWEGSWNEWTAAYPATR 269 A +C +P A +G L + F+ V+V+ Y S G + NF +W + T+ + Sbjct: 192 AAPQCPFPDAI-LGSVLNSASFDYVNVQFYNNYCSATGSSFNFDTWDNWAKTTSPNKNVK 250 Query: 268 FYVGL----TADDKSYQWVHPKNVYYSVAP-VSQKKDNYGGIMLWD 146 + TA Y P + ++ P ++ K +YGG+ +WD Sbjct: 251 IMFTVPGSSTAAGSGYV---PMSTLQTIVPSLASKYSSYGGVSVWD 293
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 31.6 bits (70), Expect = 1.1 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Frame = -3 Query: 439 ATVRCGYPPAAHVGRALATGIFERVHVRTYE---SDNGCNQNFGWEGSWNEWTAAYPATR 269 A +C +P A +G L + F+ V+V+ Y S G + NF +W + T+ + Sbjct: 192 AAPQCPFPDAI-LGSVLNSASFDYVNVQFYNNYCSATGSSFNFDTWDNWAKTTSPNKNVK 250 Query: 268 FYVGL----TADDKSYQWVHPKNVYYSVAP-VSQKKDNYGGIMLWD 146 + TA Y P + ++ P ++ + +YGG+ +WD Sbjct: 251 IMFTIPGSPTAAGSGYV---PMSTLQTIVPSLASEYSSYGGVSVWD 293
>NIRB_KLEOX (Q06458) Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)| Length = 957 Score = 30.4 bits (67), Expect = 2.4 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -3 Query: 259 GLTADDKSYQWVH-PKNVYYSVAPVSQKKDNYGGIMLWD 146 G T +SYQW H P+ VY + + K+ GG+++ D Sbjct: 336 GRTPGCQSYQWTHGPQQVYKKIVVSADGKNLLGGVLVGD 374
>ENO_DEIRA (Q9RR60) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 422 Score = 28.9 bits (63), Expect = 6.9 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Frame = -3 Query: 445 LTATVRCGYPPAAHVGRALATGIFERVHVRTY--ESDNGCNQNFGWEGSWNEWTAAYPAT 272 L A + GY P + AL + E Y ES+ + W +WT+ YP Sbjct: 221 LEAIQQAGYEPGKDICIALDPAVTELYKDGQYHLESEGRVLSSDEMIDFWADWTSRYPIV 280 Query: 271 RFYVGLTADD 242 GL DD Sbjct: 281 SIEDGLAEDD 290
>G6PI_NEUCR (Q7S986) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 561 Score = 28.9 bits (63), Expect = 6.9 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Frame = -3 Query: 322 FGWE----GSWNEWTAAYPATRFYVGLTADDKSYQWVHPKNVYYSVAPVSQKKDNYGGIM 155 FG+E G ++ W+A + YVG K H + ++ AP+ + GGI+ Sbjct: 276 FGFESWVGGRYSVWSAIGLSVALYVGYENFHKFLAGAHAMDNHFRTAPLKENIPVLGGIL 335 Query: 154 -LW-DRYFDKQTN 122 +W +++ QT+ Sbjct: 336 SVWYSNFYNAQTH 348
>CPSM_RANCA (Q91293) Carbamoyl-phosphate synthase [ammonia], mitochondrial| precursor (EC 6.3.4.16) (Carbamoyl-phosphate synthetase I) (CPSase I) Length = 1496 Score = 28.9 bits (63), Expect = 6.9 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = +3 Query: 321 KFWLHPLSLSYVLTWTRSKIPVASARPTCAAGGYPHRTVAVRCS-GFPGP 467 +F LHP SL YV+ +++ +SA + A GYP +A + + G P P Sbjct: 697 QFALHPTSLEYVIIEVNARLSRSSALAS-KATGYPLAFIAAKIALGIPLP 745 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,512,075 Number of Sequences: 219361 Number of extensions: 989294 Number of successful extensions: 2945 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 2852 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2927 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
