ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet02b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK118853.1| Arabidopsis thaliana At5g12020 mRNA for putative... 44 0.067
2gb|AC119848.8| Mus musculus chromosome 7, clone RP23-73B20, comp... 42 0.27
3gb|AC007475.7|AC007475 Drosophila melanogaster, chromosome 2R, r... 42 0.27
4gb|AC007474.5|AC007474 Drosophila melanogaster, chromosome 2R, r... 42 0.27
5gb|AC120854.15| Mus musculus chromosome 7, clone RP23-329B6, com... 42 0.27
6gb|AE003823.3| Drosophila melanogaster chromosome 2R, section 27... 42 0.27
7gb|AC132331.3| Mus musculus BAC clone RP24-217D10 from chromosom... 40 1.0
8gb|AC155314.2| Mus musculus BAC clone RP23-275G21 from chromosom... 40 1.0
9gb|AC130212.4| Mus musculus BAC clone RP23-461L3 from chromosome... 40 1.0
10emb|AL356255.15| Human DNA sequence from clone RP11-400D22 on ch... 40 1.0
11emb|AL118516.10|HSBK29F11 Human DNA sequence from clone CTA-29F1... 40 1.0
12gb|AC132482.4| Mus musculus BAC clone RP23-27C11 from 12, comple... 40 1.0
13emb|AL831793.4| Mouse DNA sequence from clone RP23-9F23 on chrom... 40 1.0
14ref|NM_203145.1| Arabidopsis thaliana unknown protein AT5G43185 ... 38 4.1
15gb|BC083360.1| Mus musculus SRY-box containing gene 14, mRNA (cD... 38 4.1
16gb|AF525764.1| Aegilops tauschii subsp. strangulata SBE I pseudo... 38 4.1
17gb|AC101728.10| Mus musculus chromosome 19, clone RP23-328I5, co... 38 4.1
18ref|XM_365445.1| Magnaporthe grisea 70-15 predicted protein (MG0... 38 4.1
19gb|AC142406.2| Mus musculus BAC clone RP24-531P16 from chromosom... 38 4.1
20gb|BC069948.1| Mus musculus SRY-box containing gene 14, mRNA (cD... 38 4.1
21ref|XM_992815.1| PREDICTED: Mus musculus SRY-box containing gene... 38 4.1
22ref|XM_907434.2| PREDICTED: Mus musculus SRY-box containing gene... 38 4.1
23ref|XM_284529.6| PREDICTED: Mus musculus SRY-box containing gene... 38 4.1
24gb|AY498860.1| Homo sapiens tumor necrosis factor receptor super... 38 4.1
25emb|CR956355.2| Pan troglodytes chromosome X BAC RP43-051D20, co... 38 4.1
26emb|CT009494.4| Mouse DNA sequence from clone RP23-125D7 on chro... 38 4.1
27gb|AC132474.3| Mus musculus BAC clone RP23-114G13 from chromosom... 38 4.1
28gb|AC125399.3| Mus musculus BAC clone RP24-245C15 from chromosom... 38 4.1
29gb|AC117237.2| Mus musculus BAC clone RP23-431G18 from 13, compl... 38 4.1
30gb|BC044735.2| Mus musculus SRY-box containing gene 14, mRNA (cD... 38 4.1
31gb|BC055767.1| Mus musculus SRY-box containing gene 14, mRNA (cD... 38 4.1
32gb|AC121244.13| Medicago truncatula clone mth2-31b9, complete se... 38 4.1
33emb|AL691464.4| Human DNA sequence from clone RP4-644F6 on chrom... 38 4.1
34emb|AL357835.11| Human DNA sequence from clone RP11-426M1 on chr... 38 4.1
35emb|AL354833.9| Human DNA sequence from clone RP11-157L14 on chr... 38 4.1
36gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 38 4.1
37gb|BC100555.1| Mus musculus SRY-box containing gene 14, mRNA (cD... 38 4.1
38gb|AC162948.4| Mus musculus BAC clone RP23-14N2 from chromosome ... 38 4.1
39emb|AL596168.1| Listeria innocua Clip11262 complete genome, segm... 38 4.1
40emb|AL035436.3|DMC163A10 Drosophila melanogaster cosmid clone 16... 38 4.1
41emb|AL713921.15| Mouse DNA sequence from clone RP23-475A8 on chr... 38 4.1
42gb|AC090415.5| Homo sapiens chromosome 18, clone RP11-529J17, co... 38 4.1
43gb|AC010327.8| Homo sapiens chromosome 19 clone CTD-2587H24, com... 38 4.1
44gb|AC078858.8| Homo sapiens 3 BAC RP11-582I8 (Roswell Park Cance... 38 4.1
45dbj|AK126597.1| Homo sapiens cDNA FLJ44634 fis, clone BRACE2023633 38 4.1
46dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 38 4.1
47gb|AC006284.4| Arabidopsis thaliana chromosome 2 clone T4M8 map ... 38 4.1
48dbj|AK138208.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 38 4.1
49gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, c... 38 4.1
50gb|AC090284.6| Homo sapiens chromosome 11, clone RP11-348B14, co... 38 4.1
51dbj|AK052135.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 38 4.1
52gb|AC153906.4| Mus musculus 10 BAC RP23-191C14 (Roswell Park Can... 38 4.1
53gb|AC158680.4| Mus musculus 6 BAC RP23-112F6 (Roswell Park Cance... 38 4.1
54dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.1
55dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.1
56dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.1
57emb|BX833632.1|CNS0A0HU Arabidopsis thaliana Full-length cDNA Co... 38 4.1
58emb|BX831736.1|CNS09ZRQ Arabidopsis thaliana Full-length cDNA Co... 38 4.1
59emb|BX833634.1|CNS09YYQ Arabidopsis thaliana Full-length cDNA Co... 38 4.1
60gb|AC116543.6| Drosophila melanogaster X BAC RP98-1A14 (Roswell ... 38 4.1
61gb|AC012073.9| Homo sapiens BAC clone RP11-443B20 from 2, comple... 38 4.1
62dbj|AP000816.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.1
63dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.1
64dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic D... 38 4.1
65dbj|AB026639.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 38 4.1
66dbj|AB023030.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 38 4.1
67dbj|AK110993.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.1
68emb|CT573052.2| Medicago truncatula chromosome 5 clone mth2-60f2... 38 4.1
69gb|AE003426.3| Drosophila melanogaster chromosome X, section 10 ... 38 4.1
70emb|BX470101.6| Mouse DNA sequence from clone RP23-217L21 on chr... 38 4.1
71gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 4.1
72gb|AC134606.4| Mus musculus BAC clone RP23-52K6 from 9, complete... 38 4.1
73gb|AC115017.11| Mus musculus chromosome 3, clone RP24-220A11, co... 38 4.1
74emb|AL355818.13| Human DNA sequence from clone RP4-667C9 on chro... 38 4.1
75emb|AL732475.6| Mouse DNA sequence from clone RP23-202H24 on chr... 38 4.1
76dbj|AB004814.1| Oryza sativa (japonica cultivar-group) DNA for N... 38 4.1
77dbj|AP003784.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 38 4.1 
>dbj|AK118853.1| Arabidopsis thaliana At5g12020 mRNA for putative heat shock
          protein 17.6-II, complete cds, clone: RAFL21-18-B19
          Length = 733

 Score = 44.1 bits (22), Expect = 0.067
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 agaaccgaaagaaaacaaaaag 81
          ||||||||||||||||||||||
Sbjct: 29 agaaccgaaagaaaacaaaaag 50
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>gb|AC119848.8| Mus musculus chromosome 7, clone RP23-73B20, complete sequence
          Length = 239297

 Score = 42.1 bits (21), Expect = 0.27
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 66    gaaagaaaacaaaaaggaacg 86
             |||||||||||||||||||||
Sbjct: 10125 gaaagaaaacaaaaaggaacg 10145
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>gb|AC007475.7|AC007475 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone
             BACR04E21, complete sequence
          Length = 173613

 Score = 42.1 bits (21), Expect = 0.27
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 66    gaaagaaaacaaaaaggaacg 86
             |||||||||||||||||||||
Sbjct: 53873 gaaagaaaacaaaaaggaacg 53853
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>gb|AC007474.5|AC007474 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone
              BACR14L19, complete sequence
          Length = 192763

 Score = 42.1 bits (21), Expect = 0.27
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 66     gaaagaaaacaaaaaggaacg 86
              |||||||||||||||||||||
Sbjct: 178150 gaaagaaaacaaaaaggaacg 178130
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>gb|AC120854.15| Mus musculus chromosome 7, clone RP23-329B6, complete sequence
          Length = 205102

 Score = 42.1 bits (21), Expect = 0.27
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 66     gaaagaaaacaaaaaggaacg 86
              |||||||||||||||||||||
Sbjct: 107415 gaaagaaaacaaaaaggaacg 107395
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>gb|AE003823.3| Drosophila melanogaster chromosome 2R, section 27 of 73 of the complete
             sequence
          Length = 292919

 Score = 42.1 bits (21), Expect = 0.27
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 66    gaaagaaaacaaaaaggaacg 86
             |||||||||||||||||||||
Sbjct: 64718 gaaagaaaacaaaaaggaacg 64698
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>gb|AC132331.3| Mus musculus BAC clone RP24-217D10 from chromosome 12, complete sequence
          Length = 176940

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 53     tggaaaaagaaccgaaagaaaacaaaaa 80
              ||||||||||| ||||||| ||||||||
Sbjct: 152018 tggaaaaagaatcgaaagagaacaaaaa 152045
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>gb|AC155314.2| Mus musculus BAC clone RP23-275G21 from chromosome 15, complete
             sequence
          Length = 205639

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    gaaaaagaaccgaaagaaaa 74
             ||||||||||||||||||||
Sbjct: 72542 gaaaaagaaccgaaagaaaa 72523
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>gb|AC130212.4| Mus musculus BAC clone RP23-461L3 from chromosome 15, complete sequence
          Length = 170741

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    gaaaaagaaccgaaagaaaa 74
             ||||||||||||||||||||
Sbjct: 57144 gaaaaagaaccgaaagaaaa 57163
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>emb|AL356255.15| Human DNA sequence from clone RP11-400D22 on chromosome 10 Contains
             part of the gene for  VPS10 domain receptor protein SORCS
             1 and a CpG island, complete sequence
          Length = 116139

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    cttggaatggaaaaagaacc 65
             ||||||||||||||||||||
Sbjct: 75729 cttggaatggaaaaagaacc 75710
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>emb|AL118516.10|HSBK29F11 Human DNA sequence from clone CTA-29F11 on chromosome 22, complete
             sequence
          Length = 89319

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    aaagaaaacaaaaaggaacg 86
             ||||||||||||||||||||
Sbjct: 78961 aaagaaaacaaaaaggaacg 78942
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>gb|AC132482.4| Mus musculus BAC clone RP23-27C11 from 12, complete sequence
          Length = 175487

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 53    tggaaaaagaaccgaaagaaaacaaaaa 80
             ||||||||||| ||||||| ||||||||
Sbjct: 12157 tggaaaaagaatcgaaagagaacaaaaa 12184
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>emb|AL831793.4| Mouse DNA sequence from clone RP23-9F23 on chromosome 4, complete
              sequence
          Length = 236470

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 54     ggaaaaagaaccgaaagaaaacaaaaag 81
              ||||||||||  ||||||||||||||||
Sbjct: 104407 ggaaaaagaaaagaaagaaaacaaaaag 104434
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>ref|NM_203145.1| Arabidopsis thaliana unknown protein AT5G43185 mRNA, complete cds
          Length = 400

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 66  gaaagaaaacaaaaaggaa 84
           |||||||||||||||||||
Sbjct: 349 gaaagaaaacaaaaaggaa 331
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>gb|BC083360.1| Mus musculus SRY-box containing gene 14, mRNA (cDNA clone
            IMAGE:5716562), partial cds
          Length = 2071

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 67   aaagaaaacaaaaaggaac 85
            |||||||||||||||||||
Sbjct: 1780 aaagaaaacaaaaaggaac 1798
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>gb|AF525764.1| Aegilops tauschii subsp. strangulata SBE I pseudogene, partial
            sequence; SBE I pseudogene, complete sequence; and starch
            branching enzyme I (SBE I) gene, complete cds
          Length = 25187

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 57   aaaagaaccgaaagaaaac 75
            |||||||||||||||||||
Sbjct: 5757 aaaagaaccgaaagaaaac 5775
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>gb|AC101728.10| Mus musculus chromosome 19, clone RP23-328I5, complete sequence
          Length = 184577

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 66     gaaagaaaacaaaaaggaa 84
              |||||||||||||||||||
Sbjct: 108446 gaaagaaaacaaaaaggaa 108464
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>ref|XM_365445.1| Magnaporthe grisea 70-15 predicted protein (MG02147.4) partial mRNA
          Length = 342

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 62  aaccgaaagaaaacaaaaa 80
           |||||||||||||||||||
Sbjct: 199 aaccgaaagaaaacaaaaa 217
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>gb|AC142406.2| Mus musculus BAC clone RP24-531P16 from chromosome 9, complete sequence
          Length = 169938

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 67    aaagaaaacaaaaaggaac 85
             |||||||||||||||||||
Sbjct: 27992 aaagaaaacaaaaaggaac 27974
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>gb|BC069948.1| Mus musculus SRY-box containing gene 14, mRNA (cDNA clone
            IMAGE:6515341), partial cds
          Length = 1968

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 67   aaagaaaacaaaaaggaac 85
            |||||||||||||||||||
Sbjct: 1673 aaagaaaacaaaaaggaac 1691
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>ref|XM_992815.1| PREDICTED: Mus musculus SRY-box containing gene 14 (Sox14), mRNA
          Length = 2131

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 67   aaagaaaacaaaaaggaac 85
            |||||||||||||||||||
Sbjct: 1849 aaagaaaacaaaaaggaac 1867
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>ref|XM_907434.2| PREDICTED: Mus musculus SRY-box containing gene 14 (Sox14), mRNA
          Length = 2140

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 67   aaagaaaacaaaaaggaac 85
            |||||||||||||||||||
Sbjct: 1849 aaagaaaacaaaaaggaac 1867
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>ref|XM_284529.6| PREDICTED: Mus musculus SRY-box containing gene 14 (Sox14), mRNA
          Length = 2131

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 67   aaagaaaacaaaaaggaac 85
            |||||||||||||||||||
Sbjct: 1849 aaagaaaacaaaaaggaac 1867
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>gb|AY498860.1| Homo sapiens tumor necrosis factor receptor superfamily, member 8
             (TNFRSF8) gene, complete cds
          Length = 84102

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 64    ccgaaagaaaacaaaaagg 82
             |||||||||||||||||||
Sbjct: 70998 ccgaaagaaaacaaaaagg 70980
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>emb|CR956355.2| Pan troglodytes chromosome X BAC RP43-051D20, complete sequence
          Length = 185393

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 66    gaaagaaaacaaaaaggaa 84
             |||||||||||||||||||
Sbjct: 16097 gaaagaaaacaaaaaggaa 16115
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>emb|CT009494.4| Mouse DNA sequence from clone RP23-125D7 on chromosome 13, complete
              sequence
          Length = 206416

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 66     gaaagaaaacaaaaaggaa 84
              |||||||||||||||||||
Sbjct: 104122 gaaagaaaacaaaaaggaa 104140
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>gb|AC132474.3| Mus musculus BAC clone RP23-114G13 from chromosome 9, complete sequence
          Length = 220976

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 67     aaagaaaacaaaaaggaac 85
              |||||||||||||||||||
Sbjct: 184889 aaagaaaacaaaaaggaac 184907
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>gb|AC125399.3| Mus musculus BAC clone RP24-245C15 from chromosome 14, complete
             sequence
          Length = 195425

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 67    aaagaaaacaaaaaggaac 85
             |||||||||||||||||||
Sbjct: 35199 aaagaaaacaaaaaggaac 35217
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>gb|AC117237.2| Mus musculus BAC clone RP23-431G18 from 13, complete sequence
          Length = 200110

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 66    gaaagaaaacaaaaaggaa 84
             |||||||||||||||||||
Sbjct: 31660 gaaagaaaacaaaaaggaa 31678
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>gb|BC044735.2| Mus musculus SRY-box containing gene 14, mRNA (cDNA clone
            IMAGE:5116317), partial cds
          Length = 1323

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 67   aaagaaaacaaaaaggaac 85
            |||||||||||||||||||
Sbjct: 1142 aaagaaaacaaaaaggaac 1160
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>gb|BC055767.1| Mus musculus SRY-box containing gene 14, mRNA (cDNA clone
            IMAGE:6412399), partial cds
          Length = 2096

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 67   aaagaaaacaaaaaggaac 85
            |||||||||||||||||||
Sbjct: 1773 aaagaaaacaaaaaggaac 1791
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>gb|AC121244.13| Medicago truncatula clone mth2-31b9, complete sequence
          Length = 146189

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 56    aaaaagaaccgaaagaaaa 74
             |||||||||||||||||||
Sbjct: 83769 aaaaagaaccgaaagaaaa 83751
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>emb|AL691464.4| Human DNA sequence from clone RP4-644F6 on chromosome 1 Contains a
             novel gene (DKFZp686G0786), a calpain, small subunit 1
             (CAPNS1) pseudogene and a guanylate binding protein
             pseudogene, complete sequence
          Length = 83709

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 44    accttggaatggaaaaaga 62
             |||||||||||||||||||
Sbjct: 42820 accttggaatggaaaaaga 42802
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>emb|AL357835.11| Human DNA sequence from clone RP11-426M1 on chromosome 1 Contains the
             TNFRSF8 gene for tumor necrosis factor receptor
             superfamily member 8, a ribosomal protein L23a (RPL23A)
             pseudogene, the 5' end of the TNFRSF1B gene for tumor
             necrosis factor receptor superfamily member 1B and three
             CpG islands, complete sequence
          Length = 151498

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 64    ccgaaagaaaacaaaaagg 82
             |||||||||||||||||||
Sbjct: 86617 ccgaaagaaaacaaaaagg 86599
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>emb|AL354833.9| Human DNA sequence from clone RP11-157L14 on chromosome 13 Contains an
             olfactory receptor pseudogene,  a novel gene (RGC32), the
             3' end of a novel gene (contains KIAA0564 and FLJ21779)
             possible ortholog of RIKEN cDNA 1300010F03 gene, and 2 CpG
             islands, complete sequence
          Length = 158871

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    agaccaatcccaaagagag 35
             |||||||||||||||||||
Sbjct: 75974 agaccaatcccaaagagag 75956
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 62      aaccgaaagaaaacaaaaaggaa 84
               ||||||||||||| |||||||||
Sbjct: 1053044 aaccgaaagaaaagaaaaaggaa 1053022
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>gb|BC100555.1| Mus musculus SRY-box containing gene 14, mRNA (cDNA clone
            IMAGE:6829122), partial cds
          Length = 2080

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 67   aaagaaaacaaaaaggaac 85
            |||||||||||||||||||
Sbjct: 1784 aaagaaaacaaaaaggaac 1802
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>gb|AC162948.4| Mus musculus BAC clone RP23-14N2 from chromosome 9, complete sequence
          Length = 221791

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 67     aaagaaaacaaaaaggaac 85
              |||||||||||||||||||
Sbjct: 218099 aaagaaaacaaaaaggaac 218117
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>emb|AL596168.1| Listeria innocua Clip11262 complete genome, segment 6/12
          Length = 333050

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 45     ccttggaatggaaaaagaa 63
              |||||||||||||||||||
Sbjct: 218483 ccttggaatggaaaaagaa 218501
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>emb|AL035436.3|DMC163A10 Drosophila melanogaster cosmid clone 163A10
          Length = 36056

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 48    tggaatggaaaaagaaccgaaagaaaa 74
             ||||||||||| ||||| |||||||||
Sbjct: 26856 tggaatggaaacagaacggaaagaaaa 26882
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>emb|AL713921.15| Mouse DNA sequence from clone RP23-475A8 on chromosome 11 Contains a
              novel gene and a CpG island, complete sequence
          Length = 214065

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 66     gaaagaaaacaaaaaggaa 84
              |||||||||||||||||||
Sbjct: 154015 gaaagaaaacaaaaaggaa 153997
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>gb|AC090415.5| Homo sapiens chromosome 18, clone RP11-529J17, complete sequence
          Length = 155847

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 66    gaaagaaaacaaaaaggaa 84
             |||||||||||||||||||
Sbjct: 73718 gaaagaaaacaaaaaggaa 73736
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>gb|AC010327.8| Homo sapiens chromosome 19 clone CTD-2587H24, complete sequence
          Length = 146664

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 66    gaaagaaaacaaaaaggaa 84
             |||||||||||||||||||
Sbjct: 65942 gaaagaaaacaaaaaggaa 65960
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>gb|AC078858.8| Homo sapiens 3 BAC RP11-582I8 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 96298

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 67   aaagaaaacaaaaaggaac 85
            |||||||||||||||||||
Sbjct: 5564 aaagaaaacaaaaaggaac 5546
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>dbj|AK126597.1| Homo sapiens cDNA FLJ44634 fis, clone BRACE2023633
          Length = 1749

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 64  ccgaaagaaaacaaaaagg 82
           |||||||||||||||||||
Sbjct: 156 ccgaaagaaaacaaaaagg 138
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 62      aaccgaaagaaaacaaaaaggaa 84
               |||||| ||||||||||||||||
Sbjct: 3945812 aaccgagagaaaacaaaaaggaa 3945834
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>gb|AC006284.4| Arabidopsis thaliana chromosome 2 clone T4M8 map CIC11A04, complete
             sequence
          Length = 89137

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 62    aaccgaaagaaaacaaaaa 80
             |||||||||||||||||||
Sbjct: 63408 aaccgaaagaaaacaaaaa 63390
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>dbj|AK138208.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched
            library, clone:A230034A04 product:SRY-box containing gene
            14, full insert sequence
          Length = 1955

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 67   aaagaaaacaaaaaggaac 85
            |||||||||||||||||||
Sbjct: 1675 aaagaaaacaaaaaggaac 1693
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>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence
          Length = 157450

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 62    aaccgaaagaaaacaaaaaggaa 84
             ||||||||||||| |||||||||
Sbjct: 50497 aaccgaaagaaaagaaaaaggaa 50475
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>gb|AC090284.6| Homo sapiens chromosome 11, clone RP11-348B14, complete sequence
          Length = 160146

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 64     ccgaaagaaaacaaaaagg 82
              |||||||||||||||||||
Sbjct: 156492 ccgaaagaaaacaaaaagg 156474
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>dbj|AK052135.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched
            library, clone:D230049P21 product:unclassifiable, full
            insert sequence
          Length = 3188

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 67   aaagaaaacaaaaaggaac 85
            |||||||||||||||||||
Sbjct: 1327 aaagaaaacaaaaaggaac 1345
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>gb|AC153906.4| Mus musculus 10 BAC RP23-191C14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 209293

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 66     gaaagaaaacaaaaaggaa 84
              |||||||||||||||||||
Sbjct: 133390 gaaagaaaacaaaaaggaa 133372
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>gb|AC158680.4| Mus musculus 6 BAC RP23-112F6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 206705

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 66    gaaagaaaacaaaaaggaa 84
             |||||||||||||||||||
Sbjct: 77737 gaaagaaaacaaaaaggaa 77755
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 62      aaccgaaagaaaacaaaaaggaa 84
               ||||||||||||| |||||||||
Sbjct: 1053044 aaccgaaagaaaagaaaaaggaa 1053022
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 59      aagaaccgaaagaaaacaa 77
               |||||||||||||||||||
Sbjct: 6443322 aagaaccgaaagaaaacaa 6443340
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 56      aaaaagaaccgaaagaaaacaaa 78
               |||||||| ||||||||||||||
Sbjct: 8379740 aaaaagaagcgaaagaaaacaaa 8379718
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>emb|BX833632.1|CNS0A0HU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL67ZC04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 403

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 66  gaaagaaaacaaaaaggaa 84
           |||||||||||||||||||
Sbjct: 352 gaaagaaaacaaaaaggaa 334
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>emb|BX831736.1|CNS09ZRQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH26ZH10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1374

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 76  aaaaaggaacgtgagagtc 94
           |||||||||||||||||||
Sbjct: 602 aaaaaggaacgtgagagtc 620
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>emb|BX833634.1|CNS09YYQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL67ZD03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 399

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 66  gaaagaaaacaaaaaggaa 84
           |||||||||||||||||||
Sbjct: 348 gaaagaaaacaaaaaggaa 330
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>gb|AC116543.6| Drosophila melanogaster X BAC RP98-1A14 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 182387

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 48    tggaatggaaaaagaaccgaaagaaaa 74
             ||||||||||| ||||| |||||||||
Sbjct: 87030 tggaatggaaacagaacggaaagaaaa 87004
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>gb|AC012073.9| Homo sapiens BAC clone RP11-443B20 from 2, complete sequence
          Length = 153792

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    gaaagaaaacaaaaaggaa 84
             |||||||||||||||||||
Sbjct: 97712 gaaagaaaacaaaaaggaa 97694
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>dbj|AP000816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0503G09
          Length = 59843

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 56    aaaaagaaccgaaagaaaacaaa 78
             |||||||| ||||||||||||||
Sbjct: 44366 aaaaagaagcgaaagaaaacaaa 44344
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>dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1006_D05
          Length = 128178

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 59    aagaaccgaaagaaaacaa 77
             |||||||||||||||||||
Sbjct: 85315 aagaaccgaaagaaaacaa 85333
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>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:B1307A11
          Length = 131538

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 59   aagaaccgaaagaaaacaa 77
            |||||||||||||||||||
Sbjct: 3935 aagaaccgaaagaaaacaa 3953
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>dbj|AB026639.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21L13
          Length = 63921

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 58    aaagaaccgaaagaaaacaaaaa 80
             |||||| ||||||||||||||||
Sbjct: 45143 aaagaaacgaaagaaaacaaaaa 45121
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>dbj|AB023030.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K24F5
          Length = 5880

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 66   gaaagaaaacaaaaaggaa 84
            |||||||||||||||||||
Sbjct: 5406 gaaagaaaacaaaaaggaa 5424
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>dbj|AK110993.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-D12, full
            insert sequence
          Length = 2231

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 59   aagaaccgaaagaaaacaa 77
            |||||||||||||||||||
Sbjct: 1092 aagaaccgaaagaaaacaa 1110
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>emb|CT573052.2| Medicago truncatula chromosome 5 clone mth2-60f21, COMPLETE SEQUENCE
          Length = 131869

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    gaaagaaaacaaaaaggaa 84
             |||||||||||||||||||
Sbjct: 28997 gaaagaaaacaaaaaggaa 28979
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>gb|AE003426.3| Drosophila melanogaster chromosome X, section 10 of 74 of the complete
              sequence
          Length = 396604

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 48     tggaatggaaaaagaaccgaaagaaaa 74
              ||||||||||| ||||| |||||||||
Sbjct: 209577 tggaatggaaacagaacggaaagaaaa 209603
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>emb|BX470101.6| Mouse DNA sequence from clone RP23-217L21 on chromosome X, complete
             sequence
          Length = 161169

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    gaaagaaaacaaaaaggaa 84
             |||||||||||||||||||
Sbjct: 89378 gaaagaaaacaaaaaggaa 89360
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 62      aaccgaaagaaaacaaaaaggaa 84
               ||||||||||||| |||||||||
Sbjct: 1053041 aaccgaaagaaaagaaaaaggaa 1053019
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>gb|AC134606.4| Mus musculus BAC clone RP23-52K6 from 9, complete sequence
          Length = 171495

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 67    aaagaaaacaaaaaggaac 85
             |||||||||||||||||||
Sbjct: 17788 aaagaaaacaaaaaggaac 17806
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>gb|AC115017.11| Mus musculus chromosome 3, clone RP24-220A11, complete sequence
          Length = 167811

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    gaaagaaaacaaaaaggaa 84
             |||||||||||||||||||
Sbjct: 69583 gaaagaaaacaaaaaggaa 69565
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>emb|AL355818.13| Human DNA sequence from clone RP4-667C9 on chromosome 1, complete
           sequence
          Length = 101854

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 44  accttggaatggaaaaaga 62
           |||||||||||||||||||
Sbjct: 911 accttggaatggaaaaaga 929
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>emb|AL732475.6| Mouse DNA sequence from clone RP23-202H24 on chromosome X, complete
              sequence
          Length = 165720

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 67     aaagaaaacaaaaaggaac 85
              |||||||||||||||||||
Sbjct: 129662 aaagaaaacaaaaaggaac 129680
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>dbj|AB004814.1| Oryza sativa (japonica cultivar-group) DNA for NLS receptor,
          complete cds
          Length = 6530

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                 
Query: 56 aaaaagaaccgaaagaaaacaaa 78
          |||||||| ||||||||||||||
Sbjct: 39 aaaaagaagcgaaagaaaacaaa 17
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>dbj|AP003784.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-654C20, complete
             sequence
          Length = 153539

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    ccgaaagaaaacaaaaagg 82
             |||||||||||||||||||
Sbjct: 71681 ccgaaagaaaacaaaaagg 71699


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,159,429
Number of Sequences: 3902068
Number of extensions: 1159429
Number of successful extensions: 127162
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126837
Number of HSP's gapped (non-prelim): 325
length of query: 95
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 74
effective length of database: 17,151,101,840
effective search space: 1269181536160
effective search space used: 1269181536160
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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