| Clone Name | rbaet01h09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | OXAA_MYCCT (P43042) Membrane protein oxaA | 28 | 4.2 | 2 | DSL1_YEAST (P53847) Protein transport protein DSL1 (Dependent on... | 28 | 7.2 | 3 | PRLR_COLLI (Q90374) Prolactin receptor precursor (PRL-R) | 27 | 9.4 | 4 | PRLR_MELGA (Q91094) Prolactin receptor precursor (PRL-R) (TPRLR) | 27 | 9.4 |
|---|
>OXAA_MYCCT (P43042) Membrane protein oxaA| Length = 388 Score = 28.5 bits (62), Expect = 4.2 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = -1 Query: 89 VISMFFLWVAVISMATGVCCYY 24 V+ MF + ++S+ATGVC Y+ Sbjct: 325 VVMMFVFIIIIVSVATGVCIYW 346
>DSL1_YEAST (P53847) Protein transport protein DSL1 (Dependent on SLY1-20| protein 1) Length = 754 Score = 27.7 bits (60), Expect = 7.2 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +3 Query: 9 NSPNLIVAAHSSSHGNHC 62 N N++V + SSSHG HC Sbjct: 228 NEKNILVFSKSSSHGQHC 245
>PRLR_COLLI (Q90374) Prolactin receptor precursor (PRL-R)| Length = 830 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +3 Query: 216 YPTYSPSQRKKTIVQVRAGPAPHGTWT 296 Y +S + KK IVQ+ P HG+W+ Sbjct: 395 YKMFSLNPGKKYIVQIHCKPDHHGSWS 421
>PRLR_MELGA (Q91094) Prolactin receptor precursor (PRL-R) (TPRLR)| Length = 831 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +3 Query: 216 YPTYSPSQRKKTIVQVRAGPAPHGTWT 296 Y +S + KK IVQ+ P HG+W+ Sbjct: 394 YKMFSLNPGKKYIVQIHCKPDHHGSWS 420 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,209,795 Number of Sequences: 219361 Number of extensions: 788931 Number of successful extensions: 1626 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1601 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1626 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)