ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet01g08 |
|---|---|
| Clone Library Name | barley_pub |
>PRP33_DAUCA (P06600) Proline-rich 33 kDa extensin-related protein precursor| (Fragment) Length = 211 Score = 36.6 bits (83), Expect = 0.026 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +1 Query: 298 PGHQLQCLLSTHFSSHGHHGPFPLHTPCLHTPQQQH-PNMHPP 423 P H + H+ +H H P P+H P +H P +H P +H P Sbjct: 111 PVHNTPSVTDDHYPAHPIHKPQPIHRPPVHKPPTEHKPPVHEP 153
>LDB3_HUMAN (O75112) LIM domain-binding protein 3 (Z-band alternatively spliced| PDZ-motif protein) (Protein cypher) Length = 727 Score = 35.0 bits (79), Expect = 0.075 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = +3 Query: 303 APVAMPPINAFFQSRSPRTLSTPYSMPTYTPATAPQYAPS 422 +P P A + SP TP +PTYTP+ AP Y PS Sbjct: 425 SPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPS 464 Score = 28.9 bits (63), Expect = 5.4 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +3 Query: 312 AMPPINAFFQSRSPRTLSTPYSMPTYTPATAPQYAPS 422 A P A + SP TP P YTP+ AP Y P+ Sbjct: 436 AYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPA 472 Score = 28.9 bits (63), Expect = 5.4 Identities = 19/50 (38%), Positives = 23/50 (46%) Frame = +3 Query: 273 PLLLLAAETRAPVAMPPINAFFQSRSPRTLSTPYSMPTYTPATAPQYAPS 422 P ++ A R P P+ A S SP YS YTP+ AP Y PS Sbjct: 395 PRVVTTASIR-PSVYQPVPASTYSPSP---GANYSPTPYTPSPAPAYTPS 440
>TI17B_HUMAN (O60830) Mitochondrial import inner membrane translocase subunit| Tim17-B Length = 172 Score = 34.7 bits (78), Expect = 0.098 Identities = 21/71 (29%), Positives = 37/71 (52%) Frame = -2 Query: 415 AYWGAVAGVYVGMEYGVERVRGDRDWKNALIGGIATGALVSAASNNKGNKIAQDAITGGA 236 A WG G++ ++ G+ R+RG D N++ G TGA+++A S + A+ GG Sbjct: 67 AVWG---GLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLA--MVGSAMMGGI 121 Query: 235 IATAVEFINYL 203 + +E + L Sbjct: 122 LLALIEGVGIL 132
>TI17B_MOUSE (Q9Z0V7) Mitochondrial import inner membrane translocase subunit| Tim17-B Length = 172 Score = 34.3 bits (77), Expect = 0.13 Identities = 21/71 (29%), Positives = 37/71 (52%) Frame = -2 Query: 415 AYWGAVAGVYVGMEYGVERVRGDRDWKNALIGGIATGALVSAASNNKGNKIAQDAITGGA 236 A WG G++ ++ G+ R+RG D N++ G TGA+++A S + A+ GG Sbjct: 67 AVWG---GLFSTIDCGLVRLRGKEDPWNSISSGALTGAVLAARSGPLA--MVGSAMMGGI 121 Query: 235 IATAVEFINYL 203 + +E + L Sbjct: 122 LLALIEGVGIL 132
>LDB3_MOUSE (Q9JKS4) LIM domain-binding protein 3 (Z-band alternatively spliced| PDZ-motif protein) (Protein cypher) (Protein oracle) Length = 723 Score = 33.1 bits (74), Expect = 0.29 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = +3 Query: 348 SPRTLSTPYSMPTYTPATAPQYAPS 422 SP TP PTYTP+ AP Y+PS Sbjct: 428 SPAPAYTPSPAPTYTPSPAPTYSPS 452 Score = 32.7 bits (73), Expect = 0.37 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +3 Query: 303 APVAMPPINAFFQSRSPRTLSTPYSMPTYTPATAPQYAPS 422 +P P A + SP TP PTY+P+ AP Y PS Sbjct: 421 SPTPYTPSPAPAYTPSPAPTYTPSPAPTYSPSPAPAYTPS 460 Score = 28.9 bits (63), Expect = 5.4 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +3 Query: 312 AMPPINAFFQSRSPRTLSTPYSMPTYTPATAPQYAPS 422 A P A + SP +P P YTP+ AP Y P+ Sbjct: 432 AYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPNYTPT 468 Score = 28.9 bits (63), Expect = 5.4 Identities = 19/50 (38%), Positives = 23/50 (46%) Frame = +3 Query: 273 PLLLLAAETRAPVAMPPINAFFQSRSPRTLSTPYSMPTYTPATAPQYAPS 422 P ++ A R P P+ A S SP YS YTP+ AP Y PS Sbjct: 391 PRVVTTASIR-PSVYQPVPASSYSPSP---GANYSPTPYTPSPAPAYTPS 436 Score = 28.1 bits (61), Expect = 9.2 Identities = 24/66 (36%), Positives = 28/66 (42%) Frame = +3 Query: 231 AMAPPVMASWAILFPLLLLAAETRAPVAMPPINAFFQSRSPRTLSTPYSMPTYTPATAPQ 410 A A P+ AS P L AA T A A A +PR ++ YS PA A Sbjct: 322 AAASPIAAS-----PTLATAAATHAAAASAAGPAASPVENPRPQASAYS-----PAAAAS 371 Query: 411 YAPSLH 428 APS H Sbjct: 372 PAPSAH 377
>TIM22_MOUSE (Q9CQ85) Mitochondrial import inner membrane translocase subunit| Tim22 Length = 194 Score = 32.3 bits (72), Expect = 0.49 Identities = 21/66 (31%), Positives = 28/66 (42%) Frame = -2 Query: 400 VAGVYVGMEYGVERVRGDRDWKNALIGGIATGALVSAASNNKGNKIAQDAITGGAIATAV 221 V ++ E VE RG DWKN++I G TG + + K I GG A + Sbjct: 132 VGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGVKAGAIG----CGGFAAFSA 187 Query: 220 EFINYL 203 YL Sbjct: 188 AIDYYL 193
>TIM22_RAT (Q9JKW1) Mitochondrial import inner membrane translocase subunit| Tim22 Length = 192 Score = 32.3 bits (72), Expect = 0.49 Identities = 21/66 (31%), Positives = 28/66 (42%) Frame = -2 Query: 400 VAGVYVGMEYGVERVRGDRDWKNALIGGIATGALVSAASNNKGNKIAQDAITGGAIATAV 221 V ++ E VE RG DWKN++I G TG + + K I GG A + Sbjct: 130 VGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGVKAGAIG----CGGFAAFSA 185 Query: 220 EFINYL 203 YL Sbjct: 186 AIDYYL 191
>TIM22_HUMAN (Q9Y584) Mitochondrial import inner membrane translocase subunit| Tim22 (Testis-expressed sequence 4) Length = 194 Score = 32.0 bits (71), Expect = 0.64 Identities = 20/66 (30%), Positives = 28/66 (42%) Frame = -2 Query: 400 VAGVYVGMEYGVERVRGDRDWKNALIGGIATGALVSAASNNKGNKIAQDAITGGAIATAV 221 V ++ E +E RG DWKN++I G TG + + K I GG A + Sbjct: 132 VGAMFSCTECLIESYRGTSDWKNSVISGCITGGAIGFRAGLKAGAIG----CGGFAAFSA 187 Query: 220 EFINYL 203 YL Sbjct: 188 AIDYYL 193
>TIM22_BOVIN (Q5BIN4) Mitochondrial import inner membrane translocase subunit| Tim22 Length = 194 Score = 32.0 bits (71), Expect = 0.64 Identities = 21/66 (31%), Positives = 28/66 (42%) Frame = -2 Query: 400 VAGVYVGMEYGVERVRGDRDWKNALIGGIATGALVSAASNNKGNKIAQDAITGGAIATAV 221 V ++ E VE RG DWKN++I G TG + + K I GG A + Sbjct: 132 VGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGLKAGVIG----CGGFAAFSA 187 Query: 220 EFINYL 203 YL Sbjct: 188 AIDYYL 193
>TI17A_RAT (O35092) Mitochondrial import inner membrane translocase subunit| Tim17-A (Inner membrane preprotein translocase Tim17a) Length = 171 Score = 32.0 bits (71), Expect = 0.64 Identities = 19/66 (28%), Positives = 34/66 (51%) Frame = -2 Query: 415 AYWGAVAGVYVGMEYGVERVRGDRDWKNALIGGIATGALVSAASNNKGNKIAQDAITGGA 236 A WG G++ ++ G+ ++RG D N++ G TGA++ A+ N + A GG Sbjct: 67 AVWG---GLFSTIDCGMVQIRGKEDPWNSITSGALTGAIL--AARNGPVAMVGSAAMGGI 121 Query: 235 IATAVE 218 + +E Sbjct: 122 LLALIE 127
>TIM22_XENTR (Q5M7K0) Mitochondrial import inner membrane translocase subunit| Tim22 Length = 186 Score = 31.2 bits (69), Expect = 1.1 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = -2 Query: 400 VAGVYVGMEYGVERVRGDRDWKNALIGGIATGALVSAASNNKGNKI 263 V ++ E VE RG DWKN++I G TG + + K + Sbjct: 124 VGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGLKAGAL 169
>PTPRZ_RAT (Q62656) Receptor-type tyrosine-protein phosphatase zeta precursor| (EC 3.1.3.48) (R-PTP-zeta) (Phosphacan) (3F8 chondroitin sulfate proteoglycan) (3H1 keratan sulfate proteoglycan) Length = 2316 Score = 30.4 bits (67), Expect = 1.9 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +2 Query: 125 GWLQSRSSYSVLSDKNIAADMASQLGEVVD-ELDGGRDGTSGDGVLGDLVPF 277 G +S + S+ K ++AD++ + + D +LD G D +SG VPF Sbjct: 555 GTAESLNMVSITEYKEVSADLSEEENLLTDFKLDSGADDSSGSSPASSTVPF 606
>ANP_NOTCO (P24856) Ice-structuring glycoprotein precursor (ISGP) (Antifreeze| glycopeptide polyprotein) (AFGP polyprotein) [Contains: AFGP7 (AFGP 7); AFGP8 (AFGP 8); AFGP8-like] (Fragment) Length = 790 Score = 30.0 bits (66), Expect = 2.4 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = +3 Query: 213 MNSTAVAMAPPVMASWAILFPLLLLAAETRAPVAMPPINAFFQSRSPRTLSTPYSMPTYT 392 +N A A P A+ A++F AA T A A +N + +P T +TP + T Sbjct: 54 LNFAATAATPATAATPALIFAA---AAATAATPATAALNFAATAATPATAATPALIFAAT 110 Query: 393 PATAPQYA-PSLH 428 ATA A P+ H Sbjct: 111 AATAATPATPAFH 123 Score = 28.9 bits (63), Expect = 5.4 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Frame = +3 Query: 213 MNSTAVAMAPPVMASWAILFPLLLLAAETRAPVAMPPINAFFQSRSPRTLSTPYSMPTYT 392 +N A A P A+ A++F A T A A+ N + +P T +TP + T Sbjct: 530 LNFAATAATPATAATPALIFAATAATAATPATAAL---NFAATAATPATAATPALIFAAT 586 Query: 393 PATAPQYA-PSLH 428 ATA A P+ H Sbjct: 587 AATAATPATPAFH 599 Score = 28.9 bits (63), Expect = 5.4 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Frame = +3 Query: 213 MNSTAVAMAPPVMASWAILFPLLLLAAETRAPVAMPPINAFFQSRSPRTLSTPYSMPTYT 392 +N A A P A+ A++F A T A A P + + +P T +TP + T Sbjct: 88 LNFAATAATPATAATPALIFAA---TAATAATPATPAFHFAATAATPATAATPALIFAAT 144 Query: 393 PATAPQYA-PSLH 428 ATA A P+ H Sbjct: 145 AATAATPATPAFH 157
>TIM22_NEUCR (Q9C1E8) Mitochondrial import inner membrane translocase subunit| tim-22 Length = 194 Score = 30.0 bits (66), Expect = 2.4 Identities = 18/59 (30%), Positives = 29/59 (49%) Frame = -2 Query: 400 VAGVYVGMEYGVERVRGDRDWKNALIGGIATGALVSAASNNKGNKIAQDAITGGAIATA 224 V ++ G+E G+E +R D N + G TGA++ + N G + A G A +A Sbjct: 126 VGALFSGIECGIEGLRAKNDLGNGVAAGCLTGAIL---AKNGGPQAAAVGCAGFAAFSA 181
>TIM22_XENLA (Q5U4U5) Mitochondrial import inner membrane translocase subunit| Tim22 Length = 184 Score = 29.6 bits (65), Expect = 3.2 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -2 Query: 400 VAGVYVGMEYGVERVRGDRDWKNALIGGIATGALV 296 V ++ E VE RG DWKN+++ G TG + Sbjct: 122 VGAMFSCTECLVESYRGKSDWKNSVMSGCITGGAI 156
>TI17A_MOUSE (Q9Z0V8) Mitochondrial import inner membrane translocase subunit| Tim17-A (Inner membrane preprotein translocase Tim17a) Length = 171 Score = 29.6 bits (65), Expect = 3.2 Identities = 18/66 (27%), Positives = 33/66 (50%) Frame = -2 Query: 415 AYWGAVAGVYVGMEYGVERVRGDRDWKNALIGGIATGALVSAASNNKGNKIAQDAITGGA 236 A WG G++ ++ + ++RG D N++ G TGA++ A+ N + A GG Sbjct: 67 AVWG---GLFSTIDCSMVQIRGKEDPWNSITSGALTGAIL--AARNGPVAMVGSAAMGGI 121 Query: 235 IATAVE 218 + +E Sbjct: 122 LLALIE 127
>TI17A_HUMAN (Q99595) Mitochondrial import inner membrane translocase subunit| Tim17-A (Inner membrane preprotein translocase Tim17a) Length = 171 Score = 29.6 bits (65), Expect = 3.2 Identities = 19/66 (28%), Positives = 33/66 (50%) Frame = -2 Query: 415 AYWGAVAGVYVGMEYGVERVRGDRDWKNALIGGIATGALVSAASNNKGNKIAQDAITGGA 236 A WG G++ ++ + +VRG D N++ G TGA++ A+ N + A GG Sbjct: 67 AVWG---GLFSMIDCSMVQVRGKEDPWNSITSGALTGAIL--AARNGPVAMVGSAAMGGI 121 Query: 235 IATAVE 218 + +E Sbjct: 122 LLALIE 127
>SGT1_YEAST (Q08446) Protein SGT1 (Suppressor of G2 allele of SKP1)| Length = 395 Score = 29.6 bits (65), Expect = 3.2 Identities = 25/108 (23%), Positives = 46/108 (42%) Frame = +3 Query: 60 ERRQQKMEKHWRKQLQLLTHRVDGFSQEVLIQSCPIKTSPRIWPHS*VR*LMNSTAVAMA 239 ++++ KH K ++ + +R D S I I+T+P+ P + +ST+V ++ Sbjct: 140 KKQKDSTNKHTIKPVESIENRGDNNSSHSPISPLKIETAPQESPKFKIDWYQSSTSVTIS 199 Query: 240 PPVMASWAILFPLLLLAAETRAPVAMPPINAFFQSRSPRTLSTPYSMP 383 LF + L P + +N + RTLS Y +P Sbjct: 200 ---------LFTVNL-------PESKEQVNIYISPNDRRTLSISYQVP 231
>GCNL2_HUMAN (Q92830) General control of amino acid synthesis protein 5-like 2| (EC 2.3.1.48) (Histone acetyltransferase GCN5) (hsGCN5) (STAF97) Length = 837 Score = 29.3 bits (64), Expect = 4.1 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = +3 Query: 291 AETRAPVAMP-PINAFFQSRSPRTLSTPYSMPTYTPATAPQYAPS 422 A T AP A P P+ + + +P +P S P TP AP AP+ Sbjct: 7 APTPAPAAQPRPLQSPAPAPTPTPAPSPASAPIPTPTPAPAPAPA 51 Score = 28.9 bits (63), Expect = 5.4 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +3 Query: 285 LAAETRAPVAMPPINAFFQSRSPRTLSTPYSMPTYTPATAPQYAP 419 +A ++AP P + PR L +P PT TPA +P AP Sbjct: 1 MAEPSQAPTPAP-------AAQPRPLQSPAPAPTPTPAPSPASAP 38
>HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engrailed| Length = 596 Score = 28.9 bits (63), Expect = 5.4 Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%) Frame = +1 Query: 331 HFSSHGHHGPFPLHTPCLHTPQQQ-HPNMHPP 423 H H HH P H H PQQQ P PP Sbjct: 93 HHHQHPHHHQLPHHPHHQHHPQQQPSPQTSPP 124
>E75BC_DROME (P17671) Ecdysone-induced protein 75B isoforms C/D (E75-A)| Length = 1199 Score = 28.9 bits (63), Expect = 5.4 Identities = 18/45 (40%), Positives = 20/45 (44%) Frame = +1 Query: 289 QQRPGHQLQCLLSTHFSSHGHHGPFPLHTPCLHTPQQQHPNMHPP 423 QQ+P Q+ HF S HH P H P QQQH H P Sbjct: 140 QQQPQQQMP----QHFESLPHHHPQQEHQP--QQQQQQHHLQHHP 178
>YETS2_MOUSE (Q3TUF7) YEATS domain-containing protein 2| Length = 1407 Score = 28.9 bits (63), Expect = 5.4 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +1 Query: 334 FSSHGHHGPFPLHTPCLHTPQQQHPNMHPP 423 FSSHG+ P+ + C PQ Q PN P Sbjct: 418 FSSHGNSAFQPIASSCKIVPQSQVPNPESP 447
>NCPR_PHAAU (P37116) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR)| (P450R) Length = 690 Score = 28.9 bits (63), Expect = 5.4 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 252 ASWAILFPLLLLAAETRAPVAMPPINAFFQSRSPRTLSTPYSMPTYTPATAPQ 410 + W + L+ P A PP+ FF + +PR YS+ + +P APQ Sbjct: 430 SKWVVGSQRSLVEVMAEFPSAKPPLGVFFAAIAPRLQPRYYSISS-SPRFAPQ 481
>ATPE_SYNY3 (P26533) ATP synthase epsilon chain (EC 3.6.3.14) (ATP synthase F1| sector epsilon subunit) Length = 135 Score = 28.9 bits (63), Expect = 5.4 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%) Frame = -2 Query: 397 AGVYVGMEYGVERVRGDRDWKN-ALIGGIA 311 A + +E GV RVR +DW+N A++GG A Sbjct: 37 APLLTALEIGVMRVRPGKDWQNIAVMGGFA 66
>TIM22_CRYNE (Q5KKL8) Mitochondrial import inner membrane translocase subunit| TIM22 Length = 187 Score = 28.9 bits (63), Expect = 5.4 Identities = 21/65 (32%), Positives = 30/65 (46%) Frame = -2 Query: 418 GAYWGAVAGVYVGMEYGVERVRGDRDWKNALIGGIATGALVSAASNNKGNKIAQDAITGG 239 G + V VY G+E +E R D N + G TGA++ + N G A+ GG Sbjct: 112 GRGFAKVGMVYSGVECCIEGYRAKNDIYNGVSAGFLTGAIL---ARNAG----PTAMLGG 164 Query: 238 AIATA 224 +A A Sbjct: 165 GVAFA 169
>ATG17_SCHPO (O42651) Autophagy-related protein 17| Length = 481 Score = 28.9 bits (63), Expect = 5.4 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = -2 Query: 100 CFLQCFSIFCCRRSHVHVLNNLFYCV 23 C+++ +IF RR H +L+N F C+ Sbjct: 2 CYMRSLAIFQFRRKHTTLLHNQFLCI 27
>GATA5_HUMAN (Q9BWX5) Transcription factor GATA-5 (GATA-binding factor 5)| Length = 397 Score = 28.9 bits (63), Expect = 5.4 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Frame = +2 Query: 224 GGRDGTSGDGVLGDLVPFVVARSRDQGTSCNASYQRIFPVTV----TTDPFH-SILH 379 GGRDG++ G L F R GTS +A+Y V T PF S+LH Sbjct: 109 GGRDGSAYQGALLPREQFAAPLGRPVGTSYSATYPAYVSPDVAQSWTAGPFDGSVLH 165
>TIM22_YEAST (Q12328) Mitochondrial import inner membrane translocase subunit| TIM22 Length = 207 Score = 28.5 bits (62), Expect = 7.1 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = -2 Query: 409 WGAVAGVYVGMEYGVERVRGDRDWKNALIGGIATGALVSAASNNKGNKIAQDAITGGA 236 +G + +Y G+E +E +R D N + G TGA ++ + Q A+ GGA Sbjct: 129 FGYIGMIYAGVECVIESLRAKNDIYNGVTAGFFTGAGLAYKAG------PQAALMGGA 180
>YL71_CAEEL (Q20624) Hypothetical protein F49E2.1 in chromosome X| Length = 600 Score = 28.5 bits (62), Expect = 7.1 Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 5/85 (5%) Frame = +2 Query: 158 LSDKNIAADMASQLGEVVDELDGGRDGTSGDGVLGDLVPFVVARSRDQGTSCNASYQRIF 337 L D+ D QL EV+ + + F RS + S N SY+ + Sbjct: 342 LRDRIRCGDSDEQLSEVIQKAVNNKKARHA--------VFRNGRSEEPAKSSNDSYRGLT 393 Query: 338 PVTVTTD-----PFHSILHAYIHPS 397 PVT + P S+ H+++H S Sbjct: 394 PVTSASSILVHLPSSSLYHSHLHSS 418
>YSR3_CAEEL (Q09951) Hypothetical protein F59B10.3| Length = 233 Score = 28.5 bits (62), Expect = 7.1 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = -1 Query: 410 LGCCCWGVCRHGVWSGKGPW 351 +GCC G C++G W + W Sbjct: 137 IGCCADGCCKNGYWHNRYGW 156
>PURA_BDEBA (Q6MN06) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 432 Score = 28.1 bits (61), Expect = 9.2 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 5/52 (9%) Frame = +2 Query: 89 LEETAPIINTQGGWLQSRSSYSVLSD-----KNIAADMASQLGEVVDELDGG 229 LE+ P+I GW Q + LSD N + SQLG +D + G Sbjct: 366 LEKVEPVIEWIPGWTQDLTKVKTLSDLPRPTTNYIDYLGSQLGTPIDVISVG 417
>TOF1_YEAST (P53840) Topoisomerase 1-associated factor 1| Length = 1238 Score = 28.1 bits (61), Expect = 9.2 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = +2 Query: 104 PIINTQGGWLQSRSSYSVLSDKNIAADMASQLGEVVDE 217 P+ N++ G+ Q Y+VL+++++ A ASQ + DE Sbjct: 767 PLHNSEVGFYQRYGEYNVLNNESMYAAPASQFKPIPDE 804
>PROP_PONPY (Q5RBP8) Properdin precursor (Factor P)| Length = 469 Score = 28.1 bits (61), Expect = 9.2 Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 9/46 (19%) Frame = -1 Query: 377 GVWSGKGPW*P*LEKC-----VDRRHCNW----CPGLCCEQQQREQ 267 G WSG GPW P C RR CN C G C Q Q + Sbjct: 137 GGWSGWGPWEPCSVTCSKGTRTRRRACNHPAPKCGGHCPGQAQESE 182
>PROP_HUMAN (P27918) Properdin precursor (Factor P)| Length = 469 Score = 28.1 bits (61), Expect = 9.2 Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 9/46 (19%) Frame = -1 Query: 377 GVWSGKGPW*P*LEKC-----VDRRHCNW----CPGLCCEQQQREQ 267 G WSG GPW P C RR CN C G C Q Q + Sbjct: 137 GGWSGWGPWEPCSVTCSKGTRTRRRACNHPAPKCGGHCPGQAQESE 182
>ABDB_DROME (P09087) Homeobox protein abdominal-B (P3) (Infraabdominal 7)| (IAB-7) (PH189) Length = 493 Score = 28.1 bits (61), Expect = 9.2 Identities = 17/42 (40%), Positives = 20/42 (47%) Frame = +1 Query: 289 QQRPGHQLQCLLSTHFSSHGHHGPFPLHTPCLHTPQQQHPNM 414 QQ Q Q L H +H HH P PLHT H HP++ Sbjct: 18 QQHLQEQQQHLQQLHHHAH-HHLPQPLHTTSHH--HSAHPHL 56
>WSC3_YEAST (Q12215) Cell wall integrity and stress response component 3| precursor Length = 556 Score = 28.1 bits (61), Expect = 9.2 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = -2 Query: 295 SAASNNKGNKIAQDAITGGAIATAV 221 +AASNN+ N ++ ++GGAIA V Sbjct: 362 AAASNNRSNSTSKQRLSGGAIAGIV 386
>TGFA_RAT (P01134) Transforming growth factor alpha precursor (TGF-alpha)| (EGF-like TGF) (ETGF) (TGF type 1) Length = 159 Score = 28.1 bits (61), Expect = 9.2 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = -1 Query: 332 CVDRRHCNWCPGLCCEQQQ 276 C R+HC WC L C ++ Sbjct: 123 CQVRKHCEWCRALVCRHEK 141
>LOZEN_DROME (Q9W349) Protein lozenge| Length = 826 Score = 28.1 bits (61), Expect = 9.2 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 4/35 (11%) Frame = +1 Query: 331 HFSSHGHHGPF----PLHTPCLHTPQQQHPNMHPP 423 H H H+ P+ P H P H P H + HPP Sbjct: 109 HHHLHHHYSPYHHAHPYHPPHPHAPHHHH-HHHPP 142
>SOX14_DROME (P40656) Putative transcription factor SOX-14| Length = 472 Score = 28.1 bits (61), Expect = 9.2 Identities = 9/25 (36%), Positives = 19/25 (76%) Frame = +3 Query: 348 SPRTLSTPYSMPTYTPATAPQYAPS 422 +P+ STP+++P ++P+ +P +PS Sbjct: 43 APKADSTPHTLPPFSPSPSPASSPS 67
>NCPR_CATRO (Q05001) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR)| (P450R) Length = 714 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = +3 Query: 282 LLAAETRAPVAMPPINAFFQSRSPRTLSTPYSMPTYTPATAPQYAPS 422 LL P A PP+ FF + +PR YS+ +++P+ APS Sbjct: 464 LLEVMAEFPSAKPPLGVFFAAIAPRLQPRFYSI-----SSSPRMAPS 505
>TGFA_PIG (Q06922) Transforming growth factor alpha precursor (TGF-alpha)| (EGF-like TGF) (ETGF) (TGF type 1) Length = 160 Score = 28.1 bits (61), Expect = 9.2 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = -1 Query: 332 CVDRRHCNWCPGLCCEQQQ 276 C R+HC WC L C ++ Sbjct: 124 CQVRKHCEWCRALICRHEK 142
>TGFA_MACMU (P55244) Transforming growth factor alpha precursor (TGF-alpha)| (EGF-like TGF) (ETGF) (TGF type 1) (Fragment) Length = 121 Score = 28.1 bits (61), Expect = 9.2 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = -1 Query: 332 CVDRRHCNWCPGLCCEQQQ 276 C R+HC WC L C ++ Sbjct: 101 CQVRKHCEWCRALICRHEK 119
>TGFA_HUMAN (P01135) Transforming growth factor alpha precursor (TGF-alpha)| (EGF-like TGF) (ETGF) (TGF type 1) Length = 160 Score = 28.1 bits (61), Expect = 9.2 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = -1 Query: 332 CVDRRHCNWCPGLCCEQQQ 276 C R+HC WC L C ++ Sbjct: 124 CQVRKHCEWCRALICRHEK 142
>ERCC4_MOUSE (Q9QZD4) DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision| repair protein ERCC-4) Length = 906 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = +3 Query: 273 PLLLLAAETRAPVAMPPINAFFQSRSPRTLSTPYSMPT-YTPATAPQYAPSLH 428 P+LL+ + P ++ P AFFQ S +S+ ++ T + P + PS H Sbjct: 745 PVLLIEFDPSKPFSLAPRGAFFQEMSSSDVSSKLTLLTLHFPRLRLLWCPSPH 797
>CP52B_CANTR (P30607) Cytochrome P450 52A2 (EC 1.14.14.-) (CYPLIIA2)| (Alkane-inducible P450-ALK2) Length = 522 Score = 28.1 bits (61), Expect = 9.2 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 6/57 (10%) Frame = +2 Query: 248 DGVLGDLVPFVVARSRDQGTSCNASYQRIFPV------TVTTDPFHSILHAYIHPSN 400 DG LG VPF + + +GT + +YQR + T T F ++ + + P N Sbjct: 51 DGYLGFRVPFELMGKKSEGTLIDFTYQRTLELDNPDIPTFTFPIFSVLIISTLEPDN 107 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,337,761 Number of Sequences: 219361 Number of extensions: 1290970 Number of successful extensions: 5154 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 4786 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5119 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
