>ATG17_SCHPO (O42651) Autophagy-related protein 17|
          Length = 481

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 100 CFLQCFSIFCCRRSHVHVLNNLFYCV 23
           C+++  +IF  RR H  +L+N F C+
Sbjct: 2   CYMRSLAIFQFRRKHTTLLHNQFLCI 27

>TOF1_YEAST (P53840) Topoisomerase 1-associated factor 1|
          Length = 1238

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = +2

Query: 104 PIINTQGGWLQSRSSYSVLSDKNIAADMASQLGEVVDE 217
           P+ N++ G+ Q    Y+VL+++++ A  ASQ   + DE
Sbjct: 767 PLHNSEVGFYQRYGEYNVLNNESMYAAPASQFKPIPDE 804

>PURA_BDEBA (Q6MN06) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 432

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
 Frame = +2

Query: 89  LEETAPIINTQGGWLQSRSSYSVLSD-----KNIAADMASQLGEVVDELDGG 229
           LE+  P+I    GW Q  +    LSD      N    + SQLG  +D +  G
Sbjct: 366 LEKVEPVIEWIPGWTQDLTKVKTLSDLPRPTTNYIDYLGSQLGTPIDVISVG 417

>Y423_MYCGE (P47662) Hypothetical protein MG423|
          Length = 561

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = +2

Query: 110 INTQGGWLQSRSSYSVLSDKNIAADMASQLGEVVDEL 220
           +NT  G++     + VL+DKNIA +  +QL +++ +L
Sbjct: 151 LNTDNGYIVFIDDFIVLNDKNIAFE--NQLNQIIPKL 185

>Y493_HAEIN (O05023) Hypothetical transposase-like protein HI0493|
          Length = 118

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +2

Query: 59  RTPATKNGKTLEETAPIINTQGGWLQSRSSYSVLSDKNIAADMASQLGEVVD 214
           RT  TK  K L+   PI+++  GWL     Y  +  +N      S+ G  +D
Sbjct: 23  RTQPTK--KDLKTQNPILHSDQGWLYQMVGYQAILRENSIQQNMSRKGNYLD 72


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,726,608
Number of Sequences: 219361
Number of extensions: 486584
Number of successful extensions: 1531
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1531
length of database: 80,573,946
effective HSP length: 52
effective length of database: 69,167,174
effective search space used: 1660012176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)