ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet01g03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ011921.1|HVU011921 Hordeum vulgare mRNA for putative amino... 442 e-121
2gb|AY107980.1| Zea mays PCO142484 mRNA sequence 50 0.003
3gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.048
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.048
5dbj|AK101693.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.048
6gb|AC140283.3| Mus musculus BAC clone RP24-510I14 from chromosom... 42 0.75
7gb|AC158903.4| Mus musculus chromosome 18, clone RP23-318E22, co... 42 0.75
8gb|AC116071.5| Rattus norvegicus 3 BAC CH230-230O7 (Children's H... 42 0.75
9emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 42 0.75
10gb|AC147068.3| Pan troglodytes BAC clone RP43-165E11 from 7, com... 40 3.0
11gb|AC146089.2| Pan troglodytes BAC clone RP43-47D18 from 7, comp... 40 3.0
12gb|AC114824.5| Mus musculus BAC clone RP23-342J11 from chromosom... 40 3.0
13gb|AC006482.3| Homo sapiens BAC clone RP11-455B5 from 7, complet... 40 3.0
14emb|AL513323.14| Human DNA sequence from clone RP11-550P17 on ch... 40 3.0
15emb|AL450108.12| Human DNA sequence from clone RP11-456E1 on chr... 40 3.0
16emb|AL138789.12| Human DNA sequence from clone RP4-694A7 on chro... 40 3.0
17emb|AL132671.20|HSDJ92C8 Human DNA sequence from clone RP1-92C8 ... 40 3.0
18emb|CR936843.10| Mouse DNA sequence from clone RP23-270K2 on chr... 40 3.0
19emb|AL606723.7| Zebrafish DNA sequence from clone BUSM1-230D15 i... 40 3.0
20gb|AC109211.10| Mus musculus chromosome 8, clone RP23-27N18, com... 40 3.0
21gb|AC083807.17| Homo sapiens 12 BAC RP11-775A14 (Roswell Park Ca... 40 3.0
22gb|AC067981.6| Homo sapiens chromosome 18, clone RP11-805E19, co... 40 3.0
23gb|AC093329.6| Homo sapiens chromosome 8, clone RP11-662G23, com... 40 3.0
24gb|AC091914.3| Homo sapiens chromosome 5 clone RP11-221N1, compl... 40 3.0
25gb|AC090282.6| Homo sapiens chromosome 17, clone CTD-2309O5, com... 40 3.0
26gb|AC068510.8| Homo sapiens chromosome 8, clone RP11-662E23, com... 40 3.0
27gb|AF003530.2|AF003530 Homo sapiens homeobox protein CDX4 (CDX4)... 40 3.0
28gb|AC146028.2| Pan troglodytes BAC clone RP43-123H13 from chromo... 40 3.0
29gb|AC097370.10| Homo sapiens chromosome 17, clone CTD-2513A7, co... 40 3.0
30gb|AC013434.8|AC013434 Homo sapiens chromosome 7 clone RP11-192D... 40 3.0
31gb|AC109491.3| Homo sapiens chromosome 5 clone RP11-727F19, comp... 40 3.0
32emb|BX004783.13| Zebrafish DNA sequence from clone DKEY-14E1 in ... 40 3.0
33emb|CT025756.17| Zebrafish DNA sequence from clone CH211-81M17 i... 40 3.0
34emb|AL359238.4|CNS05TEP Human chromosome 14 DNA sequence BAC R-4... 40 3.0
35emb|AL773593.10| Zebrafish DNA sequence from clone CH211-202N20 ... 40 3.0
36emb|BX119318.5| Human DNA sequence from clone DASS-49J3 on chrom... 40 3.0
37emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chr... 40 3.0
38gb|L77118.1|MII2CG Methanocaldococcus jannaschii DSM 2661 large ... 40 3.0
39emb|AL772397.3| Mouse DNA sequence from clone RP23-95M14 on chro... 40 3.0
40dbj|AP000897.6| Homo sapiens genomic DNA, chromosome 18, clone:R... 40 3.0
41dbj|AP001091.5| Homo sapiens genomic DNA, chromosome 18p clone:R... 40 3.0 
>emb|AJ011921.1|HVU011921 Hordeum vulgare mRNA for putative amino acid selective channel
           protein
          Length = 674

 Score =  442 bits (223), Expect = e-121
 Identities = 229/231 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atcacaactgaaggattcaaaccacgcagtaaaataaattgttaagtacatggacatgag 60
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 663 atcacaactgaaggattcaaaccacgcagtaaaataaattgttaagaacatggacatgag 604

                                                                       
Query: 61  aacgccggcaacaaaaaatggaaaaacattggaggaaacagctccaattattaacacaca 120
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 603 aacgccggcaacaaaaaatggaaaaacattggaggaaacggctccaattattaacacaca 544

                                                                       
Query: 121 gggtggatggcttcagtcaagaagttcttattcagtcttgtccgataaaaacatcgccgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gggtggatggcttcagtcaagaagttcttattcagtcttgtccgataaaaacatcgccgc 484

                                                              
Query: 181 ggatatggcctcacagctaggtgaggtagttgatgaactcgacggcggtcg 231
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ggatatggcctcacagctaggtgaggtagttgatgaactcgacggcggtcg 433
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>gb|AY107980.1| Zea mays PCO142484 mRNA sequence
          Length = 690

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 194 cagctaggtgaggtagttgatgaactcgacggc 226
           |||||||||||||||||||  ||||||||||||
Sbjct: 459 cagctaggtgaggtagttggcgaactcgacggc 427
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>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04,
             complete sequence
          Length = 176678

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 201   gtgaggtagttgatgaactcgac 223
             |||||||||||||||||||||||
Sbjct: 89062 gtgaggtagttgatgaactcgac 89040
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 201    gtgaggtagttgatgaactcgac 223
              |||||||||||||||||||||||
Sbjct: 571663 gtgaggtagttgatgaactcgac 571641
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>dbj|AK101693.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033059M19, full
           insert sequence
          Length = 697

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 201 gtgaggtagttgatgaactcgac 223
           |||||||||||||||||||||||
Sbjct: 519 gtgaggtagttgatgaactcgac 497
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>gb|AC140283.3| Mus musculus BAC clone RP24-510I14 from chromosome 18, complete
             sequence
          Length = 149264

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 28    agtaaaataaattgttaagta 48
             |||||||||||||||||||||
Sbjct: 38084 agtaaaataaattgttaagta 38064
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>gb|AC158903.4| Mus musculus chromosome 18, clone RP23-318E22, complete sequence
          Length = 201073

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    agtaaaataaattgttaagta 48
             |||||||||||||||||||||
Sbjct: 16752 agtaaaataaattgttaagta 16772
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>gb|AC116071.5| Rattus norvegicus 3 BAC CH230-230O7 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 224778

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 76     aaatggaaaaacattggagga 96
              |||||||||||||||||||||
Sbjct: 166199 aaatggaaaaacattggagga 166219
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 73      aaaaaatggaaaaacattgga 93
               |||||||||||||||||||||
Sbjct: 2361479 aaaaaatggaaaaacattgga 2361459



 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 73      aaaaaatggaaaaacattgga 93
               |||||||||||||||||||||
Sbjct: 2361352 aaaaaatggaaaaacattgga 2361332
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>gb|AC147068.3| Pan troglodytes BAC clone RP43-165E11 from 7, complete sequence
          Length = 177119

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     aacaaaaaatggaaaaacat 89
              ||||||||||||||||||||
Sbjct: 165419 aacaaaaaatggaaaaacat 165400
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>gb|AC146089.2| Pan troglodytes BAC clone RP43-47D18 from 7, complete sequence
          Length = 178573

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    aacaaaaaatggaaaaacat 89
             ||||||||||||||||||||
Sbjct: 85854 aacaaaaaatggaaaaacat 85873
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>gb|AC114824.5| Mus musculus BAC clone RP23-342J11 from chromosome 17, complete sequence
          Length = 216044

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 116    acacagggtggatggcttcagtca 139
              |||||||| |||||||||||||||
Sbjct: 108272 acacaggggggatggcttcagtca 108295
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>gb|AC006482.3| Homo sapiens BAC clone RP11-455B5 from 7, complete sequence
          Length = 180568

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     acaaaaaatggaaaaacatt 90
              ||||||||||||||||||||
Sbjct: 164257 acaaaaaatggaaaaacatt 164276
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>emb|AL513323.14| Human DNA sequence from clone RP11-550P17 on chromosome 1 Contains a
             pentraxin pseudogene, the OR10J2P olfactory receptor,
             family 10, subfamily J, member 2 pseudogene, the FCER1A
             gene for Fc fragment of IgE, high affinity I, receptor
             for; alpha polypeptide, the OR10J3 gene for olfactory
             receptor, family 10, subfamily J, member 3, the OR10J7P
             olfactory receptor, family 10, subfamily J, member 7
             pseudogene, the OR10J8P olfactory receptor, family 10,
             subfamily J, member 8 pseudogene, the OR10J9P olfactory
             receptor, family 10, subfamily J, member 9 pseudogene and
             the 3' end of a novel gene, complete sequence
          Length = 168339

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    acaaaaaatggaaaaacatt 90
             ||||||||||||||||||||
Sbjct: 66253 acaaaaaatggaaaaacatt 66234
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>emb|AL450108.12| Human DNA sequence from clone RP11-456E1 on chromosome X Contains the
              CDX4 gene for caudal type homeo box transcription factor 4,
              a mortality factor 4 like 1 (MORF4L1) pseudogene, a
              mitogen-activated protein kinase kinase 4(LOC139201,
              MAP2K4) pseudogene and a ribosomal protein L7 (RPL7)
              pseudogene, complete sequence
          Length = 188281

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     acaaaaaatggaaaaacatt 90
              ||||||||||||||||||||
Sbjct: 117076 acaaaaaatggaaaaacatt 117095
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>emb|AL138789.12| Human DNA sequence from clone RP4-694A7 on chromosome 1p31.2-32.1
             Contains the 3' end of the gene for cell cycle control
             protein SDP35 (SDP35), two novel genes and a thioredoxin
             (TXN) pseudogene, complete sequence
          Length = 96157

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    acaaaaaatggaaaaacatt 90
             ||||||||||||||||||||
Sbjct: 34150 acaaaaaatggaaaaacatt 34131
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>emb|AL132671.20|HSDJ92C8 Human DNA sequence from clone RP1-92C8 on chromosome 6 Contains a novel
             gene, a RAP1A pseudogene, the 5' end of the ROS1 gene for
             v-ros UR2 sarcoma virus oncogene homolog 1 (avian), the 5'
             end of the DCBLD1 gene for discoidin CUB and LCCL domain
             containing 1 and two CpG islands, complete sequence
          Length = 131060

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    acaaaaaatggaaaaacatt 90
             ||||||||||||||||||||
Sbjct: 58956 acaaaaaatggaaaaacatt 58975
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>emb|CR936843.10| Mouse DNA sequence from clone RP23-270K2 on chromosome 4, complete
             sequence
          Length = 128921

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   tcacagctaggtgaggtagt 210
             ||||||||||||||||||||
Sbjct: 23653 tcacagctaggtgaggtagt 23634
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>emb|AL606723.7| Zebrafish DNA sequence from clone BUSM1-230D15 in linkage group 6
             Contains a novel gene similar to TRIO (triple functional
             domain protein, PTPRF interacting) and a CpG island,
             complete sequence
          Length = 63674

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    aaaaaatggaaaaacattgg 92
             ||||||||||||||||||||
Sbjct: 58996 aaaaaatggaaaaacattgg 58977
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>gb|AC109211.10| Mus musculus chromosome 8, clone RP23-27N18, complete sequence
          Length = 212670

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     taaattgttaagtacatgga 54
              ||||||||||||||||||||
Sbjct: 181554 taaattgttaagtacatgga 181535
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>gb|AC083807.17| Homo sapiens 12 BAC RP11-775A14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 123587

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    acaaaaaatggaaaaacatt 90
             ||||||||||||||||||||
Sbjct: 64131 acaaaaaatggaaaaacatt 64112
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>gb|AC067981.6| Homo sapiens chromosome 18, clone RP11-805E19, complete sequence
          Length = 158750

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     acaaaaaatggaaaaacatt 90
              ||||||||||||||||||||
Sbjct: 100032 acaaaaaatggaaaaacatt 100051
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>gb|AC093329.6| Homo sapiens chromosome 8, clone RP11-662G23, complete sequence
          Length = 191820

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     acaaaaaatggaaaaacatt 90
              ||||||||||||||||||||
Sbjct: 111794 acaaaaaatggaaaaacatt 111775
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>gb|AC091914.3| Homo sapiens chromosome 5 clone RP11-221N1, complete sequence
          Length = 165237

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    acaaaaaatggaaaaacatt 90
             ||||||||||||||||||||
Sbjct: 75622 acaaaaaatggaaaaacatt 75603
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>gb|AC090282.6| Homo sapiens chromosome 17, clone CTD-2309O5, complete sequence
          Length = 164883

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    acaaaaaatggaaaaacatt 90
             ||||||||||||||||||||
Sbjct: 35263 acaaaaaatggaaaaacatt 35244
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>gb|AC068510.8| Homo sapiens chromosome 8, clone RP11-662E23, complete sequence
          Length = 191820

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     acaaaaaatggaaaaacatt 90
              ||||||||||||||||||||
Sbjct: 111793 acaaaaaatggaaaaacatt 111774
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>gb|AF003530.2|AF003530 Homo sapiens homeobox protein CDX4 (CDX4) gene, complete cds and
             flanking repeat regions
          Length = 97968

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    acaaaaaatggaaaaacatt 90
             ||||||||||||||||||||
Sbjct: 11440 acaaaaaatggaaaaacatt 11421
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>gb|AC146028.2| Pan troglodytes BAC clone RP43-123H13 from chromosome 7, complete
             sequence
          Length = 173456

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    acaaaaaatggaaaaacatt 90
             ||||||||||||||||||||
Sbjct: 18371 acaaaaaatggaaaaacatt 18352
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>gb|AC097370.10| Homo sapiens chromosome 17, clone CTD-2513A7, complete sequence
          Length = 158207

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    acaaaaaatggaaaaacatt 90
             ||||||||||||||||||||
Sbjct: 15884 acaaaaaatggaaaaacatt 15903
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>gb|AC013434.8|AC013434 Homo sapiens chromosome 7 clone RP11-192D18, complete sequence
          Length = 149103

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    aacaaaaaatggaaaaacat 89
             ||||||||||||||||||||
Sbjct: 57873 aacaaaaaatggaaaaacat 57854
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>gb|AC109491.3| Homo sapiens chromosome 5 clone RP11-727F19, complete sequence
          Length = 127489

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    acaaaaaatggaaaaacatt 90
             ||||||||||||||||||||
Sbjct: 25662 acaaaaaatggaaaaacatt 25643
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>emb|BX004783.13| Zebrafish DNA sequence from clone DKEY-14E1 in linkage group 6, complete
              sequence
          Length = 204385

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     aaaaaatggaaaaacattgg 92
              ||||||||||||||||||||
Sbjct: 193939 aaaaaatggaaaaacattgg 193920
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>emb|CT025756.17| Zebrafish DNA sequence from clone CH211-81M17 in linkage group 22,
             complete sequence
          Length = 162828

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    cagctccaattattaacaca 118
             ||||||||||||||||||||
Sbjct: 42505 cagctccaattattaacaca 42524
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>emb|AL359238.4|CNS05TEP Human chromosome 14 DNA sequence BAC R-452D21 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 166870

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     acaaaaaatggaaaaacatt 90
              ||||||||||||||||||||
Sbjct: 110692 acaaaaaatggaaaaacatt 110673
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>emb|AL773593.10| Zebrafish DNA sequence from clone CH211-202N20 in linkage group 5,
             complete sequence
          Length = 202726

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    cagctccaattattaacaca 118
             ||||||||||||||||||||
Sbjct: 64490 cagctccaattattaacaca 64471
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>emb|BX119318.5| Human DNA sequence from clone DASS-49J3 on chromosome 6, complete
             sequence
          Length = 134747

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    acaaaaaatggaaaaacatt 90
             ||||||||||||||||||||
Sbjct: 68610 acaaaaaatggaaaaacatt 68629
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>emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chromosome 4, complete
              sequence
          Length = 209214

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 191    tcacagctaggtgaggtagt 210
              ||||||||||||||||||||
Sbjct: 124373 tcacagctaggtgaggtagt 124354
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>gb|L77118.1|MII2CG Methanocaldococcus jannaschii DSM 2661 large extra-chromosomal element,
             complete sequence.~
          Length = 58407

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 74    aaaaatggaaaaacattggaggaa 97
             ||||||||||||| ||||||||||
Sbjct: 25933 aaaaatggaaaaatattggaggaa 25910
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>emb|AL772397.3| Mouse DNA sequence from clone RP23-95M14 on chromosome 4, complete
             sequence
          Length = 230672

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    aaaatggaaaaacattggag 94
             ||||||||||||||||||||
Sbjct: 27640 aaaatggaaaaacattggag 27621
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>dbj|AP000897.6| Homo sapiens genomic DNA, chromosome 18, clone:RP11-678G15, complete
             sequence
          Length = 187987

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    acaaaaaatggaaaaacatt 90
             ||||||||||||||||||||
Sbjct: 62001 acaaaaaatggaaaaacatt 61982
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>dbj|AP001091.5| Homo sapiens genomic DNA, chromosome 18p clone:RP11-713N19, complete
              sequences
          Length = 207785

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     acaaaaaatggaaaaacatt 90
              ||||||||||||||||||||
Sbjct: 201154 acaaaaaatggaaaaacatt 201135


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,681,293
Number of Sequences: 3902068
Number of extensions: 2681293
Number of successful extensions: 89318
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89199
Number of HSP's gapped (non-prelim): 119
length of query: 231
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 209
effective length of database: 17,147,199,772
effective search space: 3583764752348
effective search space used: 3583764752348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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