ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet01f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_542560.2| PREDICTED: Canis familiaris similar to Calcium ... 40 2.4
2emb|BX247906.8| Zebrafish DNA sequence from clone DKEY-9O22 in l... 40 2.4
3dbj|AB111408.1| Acipenser baerii PGK mRNA for phosphoglycerate k... 40 2.4
4gb|AC110499.19| Mus musculus chromosome 1, clone RP23-202J6, com... 38 9.6
5ref|XM_866257.1| PREDICTED: Bos taurus similar to pre-mRNA splic... 38 9.6
6gb|AC157771.8| Mus musculus chromosome 1, clone RP24-287N8, comp... 38 9.6
7gb|AC164701.4| Mus musculus BAC clone RP24-108J12 from chromosom... 38 9.6
8gb|AC119853.9| Mus musculus chromosome 16, clone RP23-231E23, co... 38 9.6
9ref|XM_447859.1| Candida glabrata CBS138, CAGL0J03564g partial mRNA 38 9.6
10ref|XM_810095.1| Trypanosoma cruzi strain CL Brener trans-sialid... 38 9.6
11emb|AL021346.1|CEH37A05 Caenorhabditis elegans Fosmid H37A05, co... 38 9.6
12gb|AC121945.2| Mus musculus BAC clone RP24-211I4 from 17, comple... 38 9.6
13emb|CR713718.2|CNS0GDNM Tetraodon nigroviridis full-length cDNA 38 9.6
14emb|AL354726.17| Human DNA sequence from clone RP11-535C21 on ch... 38 9.6
15emb|AL353621.19| Human DNA sequence from clone RP11-490D19 on ch... 38 9.6
16gb|AC129471.1| Homo sapiens chromosome 5 clone RP11-352J21, comp... 38 9.6
17emb|AL136370.4| Human DNA sequence from clone RP11-101E13 on chr... 38 9.6
18emb|AL079301.14|HSDJ753M9 Human DNA sequence from clone RP4-753M... 38 9.6
19emb|AL021877.1|HS101G11 Human DNA sequence from clone RP1-101G11... 38 9.6
20emb|CR380956.1| Candida glabrata strain CBS138 chromosome J comp... 38 9.6
21emb|BX914196.10| Zebrafish DNA sequence from clone DKEYP-71E8 in... 38 9.6
22gb|AC025033.20| Homo sapiens 3 BAC RP11-79M21 (Roswell Park Canc... 38 9.6
23gb|AC150372.15| Medicago truncatula clone mth2-151k24, complete ... 38 9.6
24gb|AC146347.4| Pan troglodytes clone rp43-34h2, complete sequence 38 9.6
25gb|AC027031.5| Homo sapiens chromosome 8, clone RP11-778D12, com... 38 9.6
26gb|AC106791.4| Homo sapiens chromosome 5 clone RP11-381K20, comp... 38 9.6
27gb|AC093811.3| Homo sapiens BAC clone RP11-355H11 from 4, comple... 38 9.6
28gb|AC010265.5| Homo sapiens chromosome 5 clone CTC-470E21, compl... 38 9.6
29ref|XM_940288.1| PREDICTED: Homo sapiens hypothetical protein LO... 38 9.6
30ref|XM_927435.1| PREDICTED: Homo sapiens hypothetical protein LO... 38 9.6
31gb|AC026639.6| Homo sapiens chromosome 11, clone RP11-4B7, compl... 38 9.6
32gb|AC122710.3| Homo sapiens chromosome 5 clone RP11-332J15, comp... 38 9.6
33gb|AC007398.6|AC007398 Drosophila melanogaster, chromosome 2R, r... 38 9.6
34gb|AC079835.5| Homo sapiens BAC clone RP11-15O17 from 4, complet... 38 9.6
35gb|AC124016.3| Homo sapiens BAC clone RP11-127B20 from 4, comple... 38 9.6
36gb|AC117073.2| Dictyostelium discoideum chromosome 2 map 6045872... 38 9.6
37gb|AC098817.3| Homo sapiens BAC clone RP11-92A1 from 2, complete... 38 9.6
38gb|AC018462.4| Homo sapiens BAC clone RP11-270B14 from 2, comple... 38 9.6
39gb|AC051627.4|AC051627 Genomic Sequence For Arabidopsis thaliana... 38 9.6
40emb|BX648095.1|HSM808242 Homo sapiens mRNA; cDNA DKFZp686N0232 (... 38 9.6
41emb|Z48506.1|BSMRVPP Brome streak mosaic rymovirus polyprotein RNA 38 9.6
42emb|BX897668.12| Zebrafish DNA sequence from clone CH211-13H4 in... 38 9.6
43gb|AC147900.2| Xenopus tropicalis clone CH216-53P23, complete se... 38 9.6
44emb|AL954657.14| Zebrafish DNA sequence from clone CH211-223E21 ... 38 9.6
45gb|AE003829.4| Drosophila melanogaster chromosome 2R, section 21... 38 9.6
46gb|AC154579.3| Mus musculus BAC clone RP23-376B1 from chromosome... 38 9.6
47emb|AL442637.4|HS495L19 Homo sapiens chromosome 9 BAC RP11-495L1... 38 9.6
48gb|AC159289.3| Mus musculus BAC clone RP23-290F13 from chromosom... 38 9.6
49dbj|AB050255.1| Macaca fascicularis brain cDNA, clone:QnpA-18332 38 9.6 
>ref|XM_542560.2| PREDICTED: Canis familiaris similar to Calcium binding protein
           39-like (Mo25-like protein) (Antigen MLAA-34)
           (LOC485442), mRNA
          Length = 993

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  tccttgagtttctgagcagc 51
           ||||||||||||||||||||
Sbjct: 902 tccttgagtttctgagcagc 921
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>emb|BX247906.8| Zebrafish DNA sequence from clone DKEY-9O22 in linkage group 24,
             complete sequence
          Length = 213917

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     taggatgatctataaatctc 26
             ||||||||||||||||||||
Sbjct: 48930 taggatgatctataaatctc 48949
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>dbj|AB111408.1| Acipenser baerii PGK mRNA for phosphoglycerate kinase, partial cds
          Length = 1634

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  acacatgaacaaaaacaagc 138
            ||||||||||||||||||||
Sbjct: 1408 acacatgaacaaaaacaagc 1389
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>gb|AC110499.19| Mus musculus chromosome 1, clone RP23-202J6, complete sequence
          Length = 212282

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 26     ctcccttccttgagtttct 44
              |||||||||||||||||||
Sbjct: 109288 ctcccttccttgagtttct 109270
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>ref|XM_866257.1| PREDICTED: Bos taurus similar to pre-mRNA splicing factor-like
           (LOC614680), partial mRNA
          Length = 1131

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 37  gagtttctgagcagcacag 55
           |||||||||||||||||||
Sbjct: 976 gagtttctgagcagcacag 994
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>gb|AC157771.8| Mus musculus chromosome 1, clone RP24-287N8, complete sequence
          Length = 189621

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 26     ctcccttccttgagtttct 44
              |||||||||||||||||||
Sbjct: 148970 ctcccttccttgagtttct 148952
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>gb|AC164701.4| Mus musculus BAC clone RP24-108J12 from chromosome 17, complete sequence
          Length = 184296

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 18     ataaatctctcccttcctt 36
              |||||||||||||||||||
Sbjct: 149328 ataaatctctcccttcctt 149310
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>gb|AC119853.9| Mus musculus chromosome 16, clone RP23-231E23, complete sequence
          Length = 236274

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 119   acacatgaacaaaaacaag 137
             |||||||||||||||||||
Sbjct: 89407 acacatgaacaaaaacaag 89389
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>ref|XM_447859.1| Candida glabrata CBS138, CAGL0J03564g partial mRNA
          Length = 3090

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 128  caaaaacaagcattgttgg 146
            |||||||||||||||||||
Sbjct: 2171 caaaaacaagcattgttgg 2189
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>ref|XM_810095.1| Trypanosoma cruzi strain CL Brener trans-sialidase
            (Tc00.1047053506131.170) partial mRNA
          Length = 2589

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 102  gatggtttctcatcatcac 120
            |||||||||||||||||||
Sbjct: 1343 gatggtttctcatcatcac 1325
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>emb|AL021346.1|CEH37A05 Caenorhabditis elegans Fosmid H37A05, complete sequence
          Length = 31226

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 7     taggatgatctataaatctctcc 29
             |||||||||||||| ||||||||
Sbjct: 21232 taggatgatctatagatctctcc 21254
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>gb|AC121945.2| Mus musculus BAC clone RP24-211I4 from 17, complete sequence
          Length = 157262

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 18    ataaatctctcccttcctt 36
             |||||||||||||||||||
Sbjct: 80520 ataaatctctcccttcctt 80502
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>emb|CR713718.2|CNS0GDNM Tetraodon nigroviridis full-length cDNA
          Length = 467

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 114 tcatcacacatgaacaaaa 132
           |||||||||||||||||||
Sbjct: 131 tcatcacacatgaacaaaa 149
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>emb|AL354726.17| Human DNA sequence from clone RP11-535C21 on chromosome 9 Contains 5'
             end of HEMGN gene for hemogen, the ANP32B gene for acidic
             (leucine-rich) nuclear phosphoprotein 32 family, member B
             and a CpG island, complete sequence
          Length = 82316

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 127   acaaaaacaagcattgttg 145
             |||||||||||||||||||
Sbjct: 66974 acaaaaacaagcattgttg 66956
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>emb|AL353621.19| Human DNA sequence from clone RP11-490D19 on chromosome 9 Contains a
              novel pseudogene, the MRPL50 gene for mitochondrial
              ribosomal protein L50, the ZNF189 gene for zinc finger
              protein 189, the ALDOB gene for aldolase B,
              fructose-bisphosphate, a NADH dehydrogenase (ubiquinone) 1
              alpha subcomplex (NDUFA4) pseudogene, three novel genes,
              the 5' end of the RNF20 gene for ring finger protein 20 and
              three CpG islands, complete sequence
          Length = 164115

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 127    acaaaaacaagcattgttg 145
              |||||||||||||||||||
Sbjct: 133737 acaaaaacaagcattgttg 133755
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>gb|AC129471.1| Homo sapiens chromosome 5 clone RP11-352J21, complete sequence
          Length = 180334

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 127    acaaaaacaagcattgttg 145
              |||||||||||||||||||
Sbjct: 172513 acaaaaacaagcattgttg 172495
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>emb|AL136370.4| Human DNA sequence from clone RP11-101E13 on chromosome 1q31.2-31.3
              Contains a zinc finger protein 101 (ZNF101) pseudogene, the
              UCHL5 gene for ubiquitin carboxyl-terminal hydrolase L5,
              the SSA2 gene for Sjogren syndrome antigen A2 (60kDa,
              ribonucleoprotein autoantigen SS-A/Ro), the GLRX2 gene for
              glutaredoxin 2 and two CpG islands, complete sequence
          Length = 147978

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 127    acaaaaacaagcattgttg 145
              |||||||||||||||||||
Sbjct: 143142 acaaaaacaagcattgttg 143160
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>emb|AL079301.14|HSDJ753M9 Human DNA sequence from clone RP4-753M9 on chromosome 22 Contains
           EST and STS, complete sequence
          Length = 57698

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 127 acaaaaacaagcattgttg 145
           |||||||||||||||||||
Sbjct: 507 acaaaaacaagcattgttg 525
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>emb|AL021877.1|HS101G11 Human DNA sequence from clone RP1-101G11 on chromosome 22q12, complete
             sequence
          Length = 150236

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 127   acaaaaacaagcattgttg 145
             |||||||||||||||||||
Sbjct: 91671 acaaaaacaagcattgttg 91653
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>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence
          Length = 1192501

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 128    caaaaacaagcattgttgg 146
              |||||||||||||||||||
Sbjct: 340214 caaaaacaagcattgttgg 340232
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>emb|BX914196.10| Zebrafish DNA sequence from clone DKEYP-71E8 in linkage group 7,
             complete sequence
          Length = 166715

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 126   aacaaaaacaagcattgtt 144
             |||||||||||||||||||
Sbjct: 91304 aacaaaaacaagcattgtt 91322
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>gb|AC025033.20| Homo sapiens 3 BAC RP11-79M21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 90801

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 127   acaaaaacaagcattgttg 145
             |||||||||||||||||||
Sbjct: 27096 acaaaaacaagcattgttg 27078
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>gb|AC150372.15| Medicago truncatula clone mth2-151k24, complete sequence
          Length = 100538

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 126   aacaaaaacaagcattgtt 144
             |||||||||||||||||||
Sbjct: 35676 aacaaaaacaagcattgtt 35694
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>gb|AC146347.4| Pan troglodytes clone rp43-34h2, complete sequence
          Length = 157530

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 127   acaaaaacaagcattgttg 145
             |||||||||||||||||||
Sbjct: 64082 acaaaaacaagcattgttg 64064
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>gb|AC027031.5| Homo sapiens chromosome 8, clone RP11-778D12, complete sequence
          Length = 175125

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 127    acaaaaacaagcattgttg 145
              |||||||||||||||||||
Sbjct: 109327 acaaaaacaagcattgttg 109345
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>gb|AC106791.4| Homo sapiens chromosome 5 clone RP11-381K20, complete sequence
          Length = 216877

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 127    acaaaaacaagcattgttg 145
              |||||||||||||||||||
Sbjct: 157669 acaaaaacaagcattgttg 157651
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>gb|AC093811.3| Homo sapiens BAC clone RP11-355H11 from 4, complete sequence
          Length = 115335

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 127   acaaaaacaagcattgttg 145
             |||||||||||||||||||
Sbjct: 10842 acaaaaacaagcattgttg 10824
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>gb|AC010265.5| Homo sapiens chromosome 5 clone CTC-470E21, complete sequence
          Length = 126619

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 127   acaaaaacaagcattgttg 145
             |||||||||||||||||||
Sbjct: 14150 acaaaaacaagcattgttg 14132
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>ref|XM_940288.1| PREDICTED: Homo sapiens hypothetical protein LOC651159 (LOC651159),
           mRNA
          Length = 327

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 127 acaaaaacaagcattgttg 145
           |||||||||||||||||||
Sbjct: 80  acaaaaacaagcattgttg 62
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>ref|XM_927435.1| PREDICTED: Homo sapiens hypothetical protein LOC644255 (LOC644255),
           mRNA
          Length = 327

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 127 acaaaaacaagcattgttg 145
           |||||||||||||||||||
Sbjct: 80  acaaaaacaagcattgttg 62
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>gb|AC026639.6| Homo sapiens chromosome 11, clone RP11-4B7, complete sequence
          Length = 174711

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 127    acaaaaacaagcattgttg 145
              |||||||||||||||||||
Sbjct: 101884 acaaaaacaagcattgttg 101866
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>gb|AC122710.3| Homo sapiens chromosome 5 clone RP11-332J15, complete sequence
          Length = 204540

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 127    acaaaaacaagcattgttg 145
              |||||||||||||||||||
Sbjct: 193546 acaaaaacaagcattgttg 193564
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>gb|AC007398.6|AC007398 Drosophila melanogaster, chromosome 2R, region 47A-47B, BAC clone
             BACR20O22, complete sequence
          Length = 168567

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 118   cacacatgaacaaaaacaa 136
             |||||||||||||||||||
Sbjct: 57250 cacacatgaacaaaaacaa 57232
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>gb|AC079835.5| Homo sapiens BAC clone RP11-15O17 from 4, complete sequence
          Length = 165047

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 127   acaaaaacaagcattgttg 145
             |||||||||||||||||||
Sbjct: 65017 acaaaaacaagcattgttg 64999
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>gb|AC124016.3| Homo sapiens BAC clone RP11-127B20 from 4, complete sequence
          Length = 102218

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 127   acaaaaacaagcattgttg 145
             |||||||||||||||||||
Sbjct: 61833 acaaaaacaagcattgttg 61815
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>gb|AC117073.2| Dictyostelium discoideum chromosome 2 map 6045872-6061342 strain AX4,
             complete sequence
          Length = 15470

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 118   cacacatgaacaaaaacaa 136
             |||||||||||||||||||
Sbjct: 10599 cacacatgaacaaaaacaa 10617
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>gb|AC098817.3| Homo sapiens BAC clone RP11-92A1 from 2, complete sequence
          Length = 154436

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 127   acaaaaacaagcattgttg 145
             |||||||||||||||||||
Sbjct: 55824 acaaaaacaagcattgttg 55842
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>gb|AC018462.4| Homo sapiens BAC clone RP11-270B14 from 2, complete sequence
          Length = 189326

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 127    acaaaaacaagcattgttg 145
              |||||||||||||||||||
Sbjct: 164484 acaaaaacaagcattgttg 164502
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>gb|AC051627.4|AC051627 Genomic Sequence For Arabidopsis thaliana Clone T1A4 From Chromosome V,
             complete sequence
          Length = 85746

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 103   atggtttctcatcatcaca 121
             |||||||||||||||||||
Sbjct: 36822 atggtttctcatcatcaca 36840
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>emb|BX648095.1|HSM808242 Homo sapiens mRNA; cDNA DKFZp686N0232 (from clone DKFZp686N0232)
          Length = 4262

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 127  acaaaaacaagcattgttg 145
            |||||||||||||||||||
Sbjct: 1565 acaaaaacaagcattgttg 1547
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>emb|Z48506.1|BSMRVPP Brome streak mosaic rymovirus polyprotein RNA
          Length = 9672

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 100  acgatggtttctcatcatcacac 122
            ||||||||| |||||||||||||
Sbjct: 3988 acgatggttcctcatcatcacac 3966
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>emb|BX897668.12| Zebrafish DNA sequence from clone CH211-13H4 in linkage group 4,
             complete sequence
          Length = 42562

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 123   atgaacaaaaacaagcatt 141
             |||||||||||||||||||
Sbjct: 18556 atgaacaaaaacaagcatt 18574
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>gb|AC147900.2| Xenopus tropicalis clone CH216-53P23, complete sequence
          Length = 157316

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 16     ctataaatctctcccttccttga 38
              ||||||||| |||||||||||||
Sbjct: 144653 ctataaatccctcccttccttga 144631
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>emb|AL954657.14| Zebrafish DNA sequence from clone CH211-223E21 in linkage group 4,
             complete sequence
          Length = 200352

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 123   atgaacaaaaacaagcatt 141
             |||||||||||||||||||
Sbjct: 17418 atgaacaaaaacaagcatt 17436
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>gb|AE003829.4| Drosophila melanogaster chromosome 2R, section 21 of 73 of the complete
             sequence
          Length = 281782

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 118   cacacatgaacaaaaacaa 136
             |||||||||||||||||||
Sbjct: 36154 cacacatgaacaaaaacaa 36136
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>gb|AC154579.3| Mus musculus BAC clone RP23-376B1 from chromosome 17, complete sequence
          Length = 193686

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 27     tcccttccttgagtttctg 45
              |||||||||||||||||||
Sbjct: 135804 tcccttccttgagtttctg 135786
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>emb|AL442637.4|HS495L19 Homo sapiens chromosome 9 BAC RP11-495L19, complete sequence
          Length = 180915

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 112   catcatcacacatgaacaa 130
             |||||||||||||||||||
Sbjct: 56378 catcatcacacatgaacaa 56360
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>gb|AC159289.3| Mus musculus BAC clone RP23-290F13 from chromosome 17, complete
            sequence
          Length = 200848

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 18   ataaatctctcccttcctt 36
            |||||||||||||||||||
Sbjct: 7178 ataaatctctcccttcctt 7160
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>dbj|AB050255.1| Macaca fascicularis brain cDNA, clone:QnpA-18332
          Length = 2733

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 127  acaaaaacaagcattgttg 145
            |||||||||||||||||||
Sbjct: 1874 acaaaaacaagcattgttg 1856


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,085,963
Number of Sequences: 3902068
Number of extensions: 2085963
Number of successful extensions: 150324
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 150222
Number of HSP's gapped (non-prelim): 102
length of query: 194
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 172
effective length of database: 17,147,199,772
effective search space: 2949318360784
effective search space used: 2949318360784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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