ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah46g06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 Score = 1195 bits (603), Expect = 0.0 Identities = 628/638 (98%), Gaps = 1/638 (0%) Strand = Plus / Minus Query: 1 tattaaacttatatatgatgtctttcgatn-caagacgatnaaattatgcatcacatagc 59 ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 1474 tattaaacttatatatgatgtctttcgatcacaagacgatcaaattatgcatcacatagc 1415 Query: 60 agtacaattcctcgtcagaaaatggtgaagnnnnnnnggttctattgcttatggcaaatt 119 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1414 agtacaattcctcgtcagaaaatggtgaagaaaaaaaggttctattgcttatggcaaatt 1355 Query: 120 cacatcgggccatccggcatccagtactggacaataacgggtacgcactcccatggcatt 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1354 cacatcgggccatccggcatccagtactggacaataacgggtacgcactcccatggcatt 1295 Query: 180 gcattcacatcgatcggacgatatcttgatatatgtacgtttgtatatgtcggagttaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1294 gcattcacatcgatcggacgatatcttgatatatgtacgtttgtatatgtcggagttaac 1235 Query: 240 cggtggggaagatttactgctcccatgtttcgaacttgccggagacgaagtcgtagtggc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1234 cggtggggaagatttactgctcccatgtttcgaacttgccggagacgaagtcgtagtggc 1175 Query: 300 cgccgacgagcttgagggttccgttggtcacaccctccttgacgaacgggtaggtcaaga 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1174 cgccgacgagcttgagggttccgttggtcacaccctccttgacgaacgggtaggtcaaga 1115 Query: 360 ggttctggagggacacgttgacggcctccttctccaggacggtgcactggtcatcgaaag 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1114 ggttctggagggacacgttgacggcctccttctccaggacggtgcactggtcatcgaaag 1055 Query: 420 gcatggaggcgcactcagtctgcaccttcttcttggccgggaacccgatcctgacccagt 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 gcatggaggcgcactcagtctgcaccttcttcttggccgggaacccgatcctgacccagt 995 Query: 480 cctcaacgaagtggaaggagtcgtctgcgccatccttgagcgagagcagagccttgattc 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 994 cctcaacgaagtggaaggagtcgtctgcgccatccttgagcgagagcagagccttgattc 935 Query: 540 caccgcagcggctgtggccaatcaccacgatgacctcaaccttgagcgcgcagacggcgt 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 934 caccgcagcggctgtggccaatcaccacgatgacctcaaccttgagcgcgcagacggcgt 875 Query: 600 attcgatggccgatccaacaccggcgtacttgttcttg 637 |||||||||||||||||||||||||||||||||||||| Sbjct: 874 attcgatggccgatccaacaccggcgtacttgttcttg 837
>ref|NM_192260.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 819 Score = 363 bits (183), Expect = 5e-97 Identities = 318/363 (87%) Strand = Plus / Minus Query: 275 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 334 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 797 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 738 Query: 335 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 394 ||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||| Sbjct: 737 tccttgacgaacgggtaggtcttgaggttctccagggattggttcacggcctccttctcc 678 Query: 395 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 454 | || || ||| |||||||||||||||| |||||| ||| ||||| |||||||||||| Sbjct: 677 aagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaaccttcttcttg 618 Query: 455 gccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatcc 514 || ||||| ||| |||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 617 gcggggaaaccggtcctgacccagtcctcgacgaagtggaaggagtctggtgctccatcc 558 Query: 515 ttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacc 574 ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 ttgagtgagaggagggccttgattccaccgcagcggctgtggccaatcaccacgatgagt 498 Query: 575 tcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttc 634 || |||||||| |||||||||||||| ||||||||||| || || || |||| |||| || Sbjct: 497 tcgaccttgagggcgcagacggcgtactcgatggccgacccgacgccagcgtgcttgatc 438 Query: 635 ttg 637 ||| Sbjct: 437 ttg 435
>dbj|AK099825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102G17, full insert sequence Length = 1163 Score = 363 bits (183), Expect = 5e-97 Identities = 318/363 (87%) Strand = Plus / Minus Query: 275 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 334 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 847 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 788 Query: 335 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 394 ||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||| Sbjct: 787 tccttgacgaacgggtaggtcttgaggttctccagggattggttcacggcctccttctcc 728 Query: 395 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 454 | || || ||| |||||||||||||||| |||||| ||| ||||| |||||||||||| Sbjct: 727 aagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaaccttcttcttg 668 Query: 455 gccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatcc 514 || ||||| ||| |||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 667 gcggggaaaccggtcctgacccagtcctcgacgaagtggaaggagtctggtgctccatcc 608 Query: 515 ttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacc 574 ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 607 ttgagtgagaggagggccttgattccaccgcagcggctgtggccaatcaccacgatgagt 548 Query: 575 tcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttc 634 || |||||||| |||||||||||||| ||||||||||| || || || |||| |||| || Sbjct: 547 tcgaccttgagggcgcagacggcgtactcgatggccgacccgacgccagcgtgcttgatc 488 Query: 635 ttg 637 ||| Sbjct: 487 ttg 485
>dbj|AK060890.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B12, full insert sequence Length = 1165 Score = 363 bits (183), Expect = 5e-97 Identities = 318/363 (87%) Strand = Plus / Minus Query: 275 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 334 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 846 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 787 Query: 335 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 394 ||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||| Sbjct: 786 tccttgacgaacgggtaggtcttgaggttctccagggattggttcacggcctccttctcc 727 Query: 395 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 454 | || || ||| |||||||||||||||| |||||| ||| ||||| |||||||||||| Sbjct: 726 aagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaaccttcttcttg 667 Query: 455 gccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatcc 514 || ||||| ||| |||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 666 gcggggaaaccggtcctgacccagtcctcgacgaagtggaaggagtctggtgctccatcc 607 Query: 515 ttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacc 574 ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 606 ttgagtgagaggagggccttgattccaccgcagcggctgtggccaatcaccacgatgagt 547 Query: 575 tcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttc 634 || |||||||| |||||||||||||| ||||||||||| || || || |||| |||| || Sbjct: 546 tcgaccttgagggcgcagacggcgtactcgatggccgacccgacgccagcgtgcttgatc 487 Query: 635 ttg 637 ||| Sbjct: 486 ttg 484
>gb|AF182806.1|AF182806 Oryza sativa carbonic anhydrase 3 mRNA, complete cds Length = 1169 Score = 363 bits (183), Expect = 5e-97 Identities = 318/363 (87%) Strand = Plus / Minus Query: 275 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 334 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 841 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 782 Query: 335 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 394 ||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||| Sbjct: 781 tccttgacgaacgggtaggtcttgaggttctccagggattggttcacggcctccttctcc 722 Query: 395 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 454 | || || ||| |||||||||||||||| |||||| ||| ||||| |||||||||||| Sbjct: 721 aagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaaccttcttcttg 662 Query: 455 gccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatcc 514 || ||||| ||| |||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 661 gcggggaaaccggtcctgacccagtcctcgacgaagtggaaggagtctggtgctccatcc 602 Query: 515 ttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacc 574 ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 ttgagtgagaggagggccttgattccaccgcagcggctgtggccaatcaccacgatgagt 542 Query: 575 tcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttc 634 || |||||||| |||||||||||||| ||||||||||| || || || |||| |||| || Sbjct: 541 tcgaccttgagggcgcagacggcgtactcgatggccgacccgacgccagcgtgcttgatc 482 Query: 635 ttg 637 ||| Sbjct: 481 ttg 479
>gb|U08404.1|OSU08404 Oryza sativa chloroplast carbonic anhydrase mRNA, complete cds Length = 1148 Score = 363 bits (183), Expect = 5e-97 Identities = 318/363 (87%) Strand = Plus / Minus Query: 275 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 334 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 832 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 773 Query: 335 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 394 ||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||| Sbjct: 772 tccttgacgaacgggtaggtcttgaggttctccagggattggttcacggcctccttctcc 713 Query: 395 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 454 | || || ||| |||||||||||||||| |||||| ||| ||||| |||||||||||| Sbjct: 712 aagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaaccttcttcttg 653 Query: 455 gccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatcc 514 || ||||| ||| |||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 652 gcggggaaaccggtcctgacccagtcctcgacgaagtggaaggagtctggtgctccatcc 593 Query: 515 ttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacc 574 ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 592 ttgagtgagaggagggccttgattccaccgcagcggctgtggccaatcaccacgatgagt 533 Query: 575 tcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttc 634 || |||||||| |||||||||||||| ||||||||||| || || || |||| |||| || Sbjct: 532 tcgaccttgagggcgcagacggcgtactcgatggccgacccgacgccagcgtgcttgatc 473 Query: 635 ttg 637 ||| Sbjct: 472 ttg 470
>gb|AY109272.1| Zea mays PCO064414 mRNA sequence Length = 978 Score = 238 bits (120), Expect = 2e-59 Identities = 279/332 (84%) Strand = Plus / Minus Query: 278 ccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctcc 337 ||||| ||||||||||||||| ||||||| ||||||||||| || |||| || || ||| Sbjct: 719 ccggacacgaagtcgtagtgggcgccgaccagcttgagggtccccttggccagcccttcc 660 Query: 338 ttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccagg 397 | |||||| ||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 659 tggacgaaggggtaggtcttgaggttctccagggacacgttcacggcctccttctccagg 600 Query: 398 acggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttggcc 457 | || ||||||||||||||| |||| ||||||| ||| ||| |||||| |||||| Sbjct: 599 atggagcactggtcatcgaagggcacggaggcgtgctctttcttcaccttgaccttggca 540 Query: 458 gggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatccttg 517 ||||| |||||| ||||||||| ||| |||||||||||| |||| ||| || |||| | Sbjct: 539 gggaagccgatcttgacccagttctcgacgaagtggaagttgtcgggtgcaccgtcctgg 480 Query: 518 agcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacctca 577 || |||||||| ||| ||| |||||||||| ||||||||| || ||||||| |||||| Sbjct: 479 agggagagcagcgcccggatgccaccgcagcagctgtggccgatgaccacgaggacctcc 420 Query: 578 accttgagcgcgcagacggcgtattcgatggc 609 |||||||| ||||| |||||||| |||||||| Sbjct: 419 accttgagggcgcacacggcgtactcgatggc 388
>gb|U08403.1|ZMU08403 Zea mays Golden Bantam carbonic anhydrase mRNA, complete cds Length = 2184 Score = 220 bits (111), Expect = 4e-54 Identities = 255/303 (84%) Strand = Plus / Minus Query: 335 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 394 ||||||||||| |||||| || |||||||||||| |||||||| ||||||||||||||| Sbjct: 671 tccttgacgaaggggtagctcttgaggttctggagcgacacgttcacggcctccttctcc 612 Query: 395 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 454 |||| || ||||||||||||||| |||| ||| ||| ||| ||| |||||| |||||| Sbjct: 611 aggatggagcactggtcatcgaacggcacggacgcgtgctctttcttcaccttgttcttg 552 Query: 455 gccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatcc 514 || ||| |||||||||||||||||||| |||||| |||| |||| ||||| ||| Sbjct: 551 gcagggctgccgatcctgacccagtcctccacgaaggtgaagttgtcgggcgcgccgtcc 492 Query: 515 ttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacc 574 ||||| ||||| || ||| |||| |||||||||| |||||||||||| |||||||||||| Sbjct: 491 ttgagggagaggagcgccctgatgccaccgcagcagctgtggccaatgaccacgatgacc 432 Query: 575 tcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttc 634 | |||||||||||||| |||||||| |||||||| || || |||||||||||| || Sbjct: 431 tgcaccttgagcgcgcacacggcgtactcgatggcggaccctgtgccggcgtacttgatc 372 Query: 635 ttg 637 ||| Sbjct: 371 ttg 369 Score = 204 bits (103), Expect = 3e-49 Identities = 232/275 (84%) Strand = Plus / Minus Query: 335 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 394 |||||||| || |||||| || |||||||||||| |||||||| ||||||||||||||| Sbjct: 1277 tccttgaccaaggggtagctcttgaggttctggagcgacacgttcacggcctccttctcc 1218 Query: 395 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 454 |||| || ||||||||||||||| |||| ||| ||| ||| ||| |||||| |||||| Sbjct: 1217 aggatggagcactggtcatcgaacggcacggacgcgtgctctttcttcaccttgttcttg 1158 Query: 455 gccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatcc 514 || ||| |||||||||||||||||||| |||||||||||| |||| ||||| ||| Sbjct: 1157 gcagggctgccgatcctgacccagtcctccacgaagtggaagttgtcgggcgcgccgtcc 1098 Query: 515 ttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacc 574 ||||| ||||| || ||| |||| |||||||||| ||| |||||||| ||||||| |||| Sbjct: 1097 ttgagggagaggagcgccctgatgccaccgcagcagctatggccaatgaccacgaggacc 1038 Query: 575 tcaaccttgagcgcgcagacggcgtattcgatggc 609 || |||||||| ||||| || ||||| |||||||| Sbjct: 1037 tccaccttgagggcgcacacagcgtactcgatggc 1003 Score = 168 bits (85), Expect = 1e-38 Identities = 268/329 (81%) Strand = Plus / Minus Query: 281 gagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 340 ||||| |||||||||||| |||||| ||||||||||| || || | | || |||||| Sbjct: 1934 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 1875 Query: 341 acgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccaggacg 400 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| || | | Sbjct: 1874 acgaaggggtaggtcttgaggttctccagggacacgttcacggcctccttctcgagaatg 1815 Query: 401 gtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttggccggg 460 | |||||||||||||| |||| |||||| ||| ||| |||||| ||||||| | Sbjct: 1814 gaccactggtcatcgaacggcaccgaggcgtgctctttctttaccttcatcttggcaatg 1755 Query: 461 aacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatccttgagc 520 || ||||| | ||||||||||| ||||||||||||| ||| |||||| |||| ||| Sbjct: 1754 aaggcgatcttaacccagtcctcgacgaagtggaaggtgtcaggtgcgccgtcctggagt 1695 Query: 521 gagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacctcaacc 580 ||||| || ||| |||| |||||||||| ||| |||||||| ||||||| |||||| ||| Sbjct: 1694 gagaggagcgccctgatgccaccgcagcagctatggccaatgaccacgaggacctccacc 1635 Query: 581 ttgagcgcgcagacggcgtattcgatggc 609 ||||| ||||| || ||||| |||||||| Sbjct: 1634 ttgagggcgcacacagcgtactcgatggc 1606
>gb|U08401.1|ZMU08401 Zea mays carbonic anhydrase mRNA, complete cds Length = 1920 Score = 220 bits (111), Expect = 4e-54 Identities = 255/303 (84%) Strand = Plus / Minus Query: 335 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 394 ||||||||||| |||||| || |||||||||||| |||||||| ||||||||||||||| Sbjct: 950 tccttgacgaaggggtagctcttgaggttctggagcgacacgttcacggcctccttctcc 891 Query: 395 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 454 |||| || ||||||||||||||| |||| ||| ||| ||| ||| |||||| |||||| Sbjct: 890 aggatggagcactggtcatcgaacggcacggacgcgtgctctttcttcaccttgttcttg 831 Query: 455 gccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatcc 514 || ||| |||||||||||||||||||| |||||| |||| |||| ||||| ||| Sbjct: 830 gcagggctgccgatcctgacccagtcctccacgaaggtgaagttgtcgggcgcgccgtcc 771 Query: 515 ttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacc 574 ||||| ||||| || ||| |||| |||||||||| |||||||||||| |||||||||||| Sbjct: 770 ttgagggagaggagcgccctgatgccaccgcagcagctgtggccaatgaccacgatgacc 711 Query: 575 tcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttc 634 | |||||||||||||| |||||||| |||||||| || || |||||||||||| || Sbjct: 710 tgcaccttgagcgcgcacacggcgtactcgatggcggaccctgtgccggcgtacttgatc 651 Query: 635 ttg 637 ||| Sbjct: 650 ttg 648 Score = 192 bits (97), Expect = 1e-45 Identities = 271/329 (82%) Strand = Plus / Minus Query: 281 gagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 340 ||||| |||||||||||| |||||| ||||||||||| || || | | || |||||| Sbjct: 1610 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 1551 Query: 341 acgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccaggacg 400 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| || | | Sbjct: 1550 acgaaggggtaggtcttgaggttctccagggacacgttcacggcctccttctcgagaatg 1491 Query: 401 gtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttggccggg 460 | ||||||||||||||| |||| |||||| ||| ||| |||||| ||||||| | Sbjct: 1490 gagcactggtcatcgaacggcaccgaggcgtgctctttctttaccttcatcttggcaatg 1431 Query: 461 aacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatccttgagc 520 || |||||| | ||||||||||| ||||||||||||| || | ||||||| |||| ||| Sbjct: 1430 aagccgatcttaacccagtcctcgacgaagtggaaggtgtaggctgcgccgtcctggagt 1371 Query: 521 gagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacctcaacc 580 ||||| || ||| |||| |||||||||| ||| |||||||| ||||||| |||||| ||| Sbjct: 1370 gagaggagcgccctgatgccaccgcagcagctatggccaatgaccacgaggacctccacc 1311 Query: 581 ttgagcgcgcagacggcgtattcgatggc 609 ||||| ||||| || ||||| |||||||| Sbjct: 1310 ttgagggcgcacacagcgtactcgatggc 1282
>gb|AY109373.1| Zea mays CL2331_1 mRNA sequence Length = 2552 Score = 184 bits (93), Expect = 2e-43 Identities = 270/329 (82%) Strand = Plus / Minus Query: 281 gagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 340 ||||| |||||||||||| |||||| ||||||||||| || || | | || |||||| Sbjct: 1610 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 1551 Query: 341 acgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccaggacg 400 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| || | | Sbjct: 1550 acgaaggggtaggtcttgaggttctccagggacacgttcacggcctccttctcgagaatg 1491 Query: 401 gtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttggccggg 460 | ||||||||||||||| |||| |||||| ||| ||| |||||| ||||||| | Sbjct: 1490 gagcactggtcatcgaacggcaccgaggcgtgctctttctttaccttcatcttggcaatg 1431 Query: 461 aacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatccttgagc 520 || |||||| | ||||||||||| ||||||||||||| ||| |||||| |||| ||| Sbjct: 1430 aagccgatcttaacccagtcctcgacgaagtggaaggtgtcaggtgcgccgtcctggagg 1371 Query: 521 gagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacctcaacc 580 ||||| || ||| |||| |||||||||| ||| |||||||| ||||||| |||||| ||| Sbjct: 1370 gagaggagcgccctgatgccaccgcagcagctatggccaatgaccacgaggacctccacc 1311 Query: 581 ttgagcgcgcagacggcgtattcgatggc 609 ||||| ||||| || ||||| |||||||| Sbjct: 1310 ttgagggcgcacacagcgtactcgatggc 1282 Score = 170 bits (86), Expect = 4e-39 Identities = 212/254 (83%) Strand = Plus / Minus Query: 384 cctccttctccaggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgca 443 ||||||||||||||| || ||||||||||||||| |||| ||| ||| ||| ||| || Sbjct: 901 cctccttctccaggatggagcactggtcatcgaacggcacggacgcgtgctctttcttca 842 Query: 444 ccttcttcttggccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgt 503 |||| |||||||| ||| |||||||||||||||||||| |||||| |||| |||| Sbjct: 841 ccttgttcttggcagggctgccgatcctgacccagtcctccacgaaggtgaagttgtcgg 782 Query: 504 ctgcgccatccttgagcgagagcagagccttgattccaccgcagcggctgtggccaatca 563 ||||| |||||||| ||||| || ||| |||| |||||||||| |||||||||||| | Sbjct: 781 gcgcgccgtccttgagggagaggagcgccctgatgccaccgcagcagctgtggccaatga 722 Query: 564 ccacgatgacctcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccgg 623 |||||||||||| |||||||||||||| |||||||| |||||||| || || |||| Sbjct: 721 ccacgatgacctgcaccttgagcgcgcacacggcgtactcgatggcggaccctgtgccgg 662 Query: 624 cgtacttgttcttg 637 |||||||| ||||| Sbjct: 661 cgtacttgatcttg 648
>gb|U19741.1|UPU19741 Urochloa panicoides carbonic anhydrase 1 mRNA, complete cds Length = 1208 Score = 133 bits (67), Expect = 8e-28 Identities = 142/167 (85%) Strand = Plus / Minus Query: 443 accttcttcttggccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcg 502 |||||||||||||| |||| |||||||||||||||||||| |||||||||||| |||| Sbjct: 704 accttcttcttggcgaggaagccgatcctgacccagtcctcgacgaagtggaagttgtcg 645 Query: 503 tctgcgccatccttgagcgagagcagagccttgattccaccgcagcggctgtggccaatc 562 ||||||| |||| | ||||| || |||||||| |||||||||||||||||||| || Sbjct: 644 gctgcgccgtcctgcattgagaggagcgccttgatgccaccgcagcggctgtggccgatg 585 Query: 563 accacgatgacctcaaccttgagcgcgcagacggcgtattcgatggc 609 || || ||||| |||||||| |||||||||||||| |||||||| Sbjct: 584 acggtgaggaccttgaccttgagggcgcagacggcgtactcgatggc 538 Score = 125 bits (63), Expect = 2e-25 Identities = 117/135 (86%) Strand = Plus / Minus Query: 283 gacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttgac 342 |||||||||||||||||||||||| |||||||||| ||||||| |||||| ||||| || Sbjct: 864 gacgaagtcgtagtggccgccgaccagcttgagggagccgttggacacaccttccttcac 805 Query: 343 gaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccaggacggt 402 | |||||||||| |||||| | ||||| |||||||||||||||||||||| || || Sbjct: 804 ccaggggtaggtcaggaggttgtacagggagacgttgacggcctccttctccaagatgga 745 Query: 403 gcactggtcatcgaa 417 ||||||||| ||||| Sbjct: 744 gcactggtcgtcgaa 730
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 275 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 334 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 25698466 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 25698407 Query: 335 tccttgacgaacgggtaggtcaagaggttct 365 ||||||||||||||||||||| |||||||| Sbjct: 25698406 tccttgacgaacgggtaggtcttgaggttct 25698376 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 509 ccatccttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacg 568 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 25697883 ccatccttgagtgagaggagggccttgattccaccgcagcggctgtggccaatcaccacg 25697824 Query: 569 atga 572 |||| Sbjct: 25697823 atga 25697820 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 387 ccttctccaggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcacct 446 ||||||||| || || ||| |||||||||||||||| |||||| ||| ||||| |||| Sbjct: 25698164 ccttctccaagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaacct 25698105 Query: 447 tcttcttggccgggaacccgatcctgacccagtcctcaacgaagtgg 493 |||||||||| ||||| ||| |||||||||||||||| ||||||||| Sbjct: 25698104 tcttcttggcggggaaaccggtcctgacccagtcctcgacgaagtgg 25698058 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 578 accttgagcgcgcagacggcgtattcgatggccga 612 |||||||| |||||||||||||| ||||||||||| Sbjct: 25697360 accttgagggcgcagacggcgtactcgatggccga 25697326 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 531 ccttgattccaccgcagcggctgtggccaatcac 564 ||||||||||||| |||| |||||| |||||||| Sbjct: 25709583 ccttgattccaccacagcagctgtgaccaatcac 25709550
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004A09 Length = 158826 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 275 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 334 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 145272 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 145213 Query: 335 tccttgacgaacgggtaggtcaagaggttct 365 ||||||||||||||||||||| |||||||| Sbjct: 145212 tccttgacgaacgggtaggtcttgaggttct 145182 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 509 ccatccttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacg 568 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 144689 ccatccttgagtgagaggagggccttgattccaccgcagcggctgtggccaatcaccacg 144630 Query: 569 atga 572 |||| Sbjct: 144629 atga 144626 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 387 ccttctccaggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcacct 446 ||||||||| || || ||| |||||||||||||||| |||||| ||| ||||| |||| Sbjct: 144970 ccttctccaagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaacct 144911 Query: 447 tcttcttggccgggaacccgatcctgacccagtcctcaacgaagtgg 493 |||||||||| ||||| ||| |||||||||||||||| ||||||||| Sbjct: 144910 tcttcttggcggggaaaccggtcctgacccagtcctcgacgaagtgg 144864 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 578 accttgagcgcgcagacggcgtattcgatggccga 612 |||||||| |||||||||||||| ||||||||||| Sbjct: 144166 accttgagggcgcagacggcgtactcgatggccga 144132 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 531 ccttgattccaccgcagcggctgtggccaatcac 564 ||||||||||||| |||| |||||| |||||||| Sbjct: 156389 ccttgattccaccacagcagctgtgaccaatcac 156356
>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039G05 Length = 138429 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 275 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 334 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 930 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 871 Query: 335 tccttgacgaacgggtaggtcaagaggttct 365 ||||||||||||||||||||| |||||||| Sbjct: 870 tccttgacgaacgggtaggtcttgaggttct 840 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 509 ccatccttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacg 568 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 347 ccatccttgagtgagaggagggccttgattccaccgcagcggctgtggccaatcaccacg 288 Query: 569 atga 572 |||| Sbjct: 287 atga 284 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 387 ccttctccaggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcacct 446 ||||||||| || || ||| |||||||||||||||| |||||| ||| ||||| |||| Sbjct: 628 ccttctccaagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaacct 569 Query: 447 tcttcttggccgggaacccgatcctgacccagtcctcaacgaagtgg 493 |||||||||| ||||| ||| |||||||||||||||| ||||||||| Sbjct: 568 tcttcttggcggggaaaccggtcctgacccagtcctcgacgaagtgg 522 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 531 ccttgattccaccgcagcggctgtggccaatcac 564 ||||||||||||| |||| |||||| |||||||| Sbjct: 12047 ccttgattccaccacagcagctgtgaccaatcac 12014
>gb|U19739.1|UPU19739 Urochloa panicoides carbonic anhydrase 2 mRNA, complete cds Length = 1034 Score = 125 bits (63), Expect = 2e-25 Identities = 117/135 (86%) Strand = Plus / Minus Query: 283 gacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttgac 342 |||||||||||||||||||||||| |||||||||| ||||||| ||| || ||||| || Sbjct: 703 gacgaagtcgtagtggccgccgaccagcttgagggacccgttggacacgccttccttcac 644 Query: 343 gaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccaggacggt 402 | |||||||||| |||||| | |||||| |||||||| ||||||||||||| || || Sbjct: 643 ccaggggtaggtcaggaggttgtagagggagacgttgactgcctccttctccaagatgga 584 Query: 403 gcactggtcatcgaa 417 ||||||||||||||| Sbjct: 583 gcactggtcatcgaa 569 Score = 125 bits (63), Expect = 2e-25 Identities = 141/167 (84%) Strand = Plus / Minus Query: 443 accttcttcttggccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcg 502 ||||||||||| || |||| |||||||||||||| ||||| |||||||||||| |||| Sbjct: 543 accttcttcttcgcgaggaagccgatcctgacccaatcctcgacgaagtggaagttgtcg 484 Query: 503 tctgcgccatccttgagcgagagcagagccttgattccaccgcagcggctgtggccaatc 562 |||||||||||| | ||||| || |||||||| |||||||||||||||||||| || Sbjct: 483 gctgcgccatcctgcatggagaggagcgccttgatgccaccgcagcggctgtggccgatg 424 Query: 563 accacgatgacctcaaccttgagcgcgcagacggcgtattcgatggc 609 || || ||||| |||||||| |||||||||||||| |||||||| Sbjct: 423 acggtgaggaccttgaccttgagggcgcagacggcgtactcgatggc 377
>dbj|AB016283.1| Oryza sativa gene for carbonic anhydrase, complete cds Length = 8532 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 275 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 334 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 8047 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 7988 Query: 335 tccttgacgaacgggtaggtcaagaggttct 365 ||||||||||||||||||||| |||||||| Sbjct: 7987 tccttgacgaacgggtaggtcttgaggttct 7957 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 509 ccatccttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacg 568 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 7464 ccatccttgagtgagaggagggccttgattccaccgcagcggctgtggccaatcaccacg 7405 Query: 569 atga 572 |||| Sbjct: 7404 atga 7401 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 387 ccttctccaggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcacct 446 ||||||||| || || ||| |||||||||||||||| |||||| ||| ||||| |||| Sbjct: 7745 ccttctccaagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaacct 7686 Query: 447 tcttcttggccgggaacccgatcctgacccagtcctcaacgaagtgg 493 |||||||||| ||||| ||| |||||||||||||||| ||||||||| Sbjct: 7685 tcttcttggcggggaaaccggtcctgacccagtcctcgacgaagtgg 7639 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 578 accttgagcgcgcagacggcgtattcgatggccga 612 |||||||| |||||||||||||| ||||||||||| Sbjct: 6941 accttgagggcgcagacggcgtactcgatggccga 6907
>gb|M95073.1|MZEORFN Zea mays putative carbonic anhydrase homolog mRNA, partial cds Length = 210 Score = 97.6 bits (49), Expect = 4e-17 Identities = 115/137 (83%) Strand = Plus / Minus Query: 281 gagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 340 ||||| |||||||||||| |||||| ||||||||||| || || | | || |||||| Sbjct: 171 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 112 Query: 341 acgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccaggacg 400 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| || | | Sbjct: 111 acgaaggggtaggtcttgaggttctccagggacacgttcacggcctccttctcgagaatg 52 Query: 401 gtgcactggtcatcgaa 417 | ||||||||||||||| Sbjct: 51 gagcactggtcatcgaa 35
>gb|AY107300.1| Zea mays PCO064410 mRNA sequence Length = 397 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 563 accacgatgacctcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccg 622 |||||||||||||| |||||||| |||||||||||||| |||||||| || || || ||| Sbjct: 394 accacgatgacctccaccttgagggcgcagacggcgtactcgatggcggagccgacgccg 335 Query: 623 gcgtacttgttcttg 637 ||||||||| ||||| Sbjct: 334 gcgtacttggtcttg 320
>emb|AJ547634.1|PVU547634 Phaseolus vulgaris partial mRNA for carbonic anhydrase (ca gene) Length = 313 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 535 gattccaccgcagcggctgtggccaatcacca 566 ||||||||||||||| ||||||||||| |||| Sbjct: 52 gattccaccgcagcgactgtggccaataacca 21
>emb|AJ543754.1|LJA543754 Lotus japonicus mRNA for carbonic anhydrase (ca1 gene) Length = 1088 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 536 attccaccgcagcggctgtggccaat 561 |||||||||||||||||||| ||||| Sbjct: 531 attccaccgcagcggctgtgtccaat 506
>dbj|AP006093.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT47G03, TM0166, complete sequence Length = 97864 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 536 attccaccgcagcggctgtggccaat 561 |||||||||||||||||||| ||||| Sbjct: 24604 attccaccgcagcggctgtgtccaat 24579
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 530 gccttgattccaccgcagcggctgtggccaatcaccacgat 570 |||||||| |||||||| || | |||||| ||||||||||| Sbjct: 1761790 gccttgatgccaccgcaacgcccgtggcccatcaccacgat 1761830
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 544 gcagcggctgtggccaatcac 564 ||||||||||||||||||||| Sbjct: 1821237 gcagcggctgtggccaatcac 1821257
>ref|XM_838468.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1386) partial mRNA Length = 4440 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 544 gcagcggctgtggccaatcac 564 ||||||||||||||||||||| Sbjct: 4371 gcagcggctgtggccaatcac 4391
>gb|AE009465.1| Brucella melitensis 16M chromosome I, section 22 of 195 of the complete sequence Length = 11987 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 530 gccttgattccaccgcagcggctgtggccaatcaccacgat 570 |||||||| |||||||| || | |||||| ||||||||||| Sbjct: 432 gccttgatgccaccgcaacgcccgtggcccatcaccacgat 392
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 530 gccttgattccaccgcagcggctgtggccaatcaccacgat 570 |||||||| |||||||| || | |||||| ||||||||||| Sbjct: 1778683 gccttgatgccaccgcaacgcccgtggcccatcaccacgat 1778723
>dbj|AP002373.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-212D19, complete sequence Length = 138197 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 tatatgtacgtttgtatatgt 229 ||||||||||||||||||||| Sbjct: 80852 tatatgtacgtttgtatatgt 80872
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 530 gccttgattccaccgcagcggctgtggccaatcaccacgat 570 |||||||| |||||||| || | |||||| ||||||||||| Sbjct: 1775830 gccttgatgccaccgcaacgcccgtggcccatcaccacgat 1775870
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 374 acgttgacggcctccttctccagga 398 |||||||||||||||||| |||||| Sbjct: 2833138 acgttgacggcctccttcgccagga 2833114
>ref|XM_467687.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1138 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ggccgccgacgagcttgagg 316 |||||||||||||||||||| Sbjct: 102 ggccgccgacgagcttgagg 121
>ref|NM_196639.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0019M20.11), mRNA Length = 642 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ggccgccgacgagcttgagg 316 |||||||||||||||||||| Sbjct: 189 ggccgccgacgagcttgagg 208
>gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6 of 8 of the complete sequence Length = 252420 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 tgatatatgtacgtttgtatatgt 229 |||||||||||| ||||||||||| Sbjct: 127219 tgatatatgtacatttgtatatgt 127196
>emb|AL079341.19|HSDJ319M7 Human DNA sequence from clone RP1-319M7 on chromosome 6p21.1-21.3 Contains the 5' end of the gene for a novel protein (contains KIAA1880 and FLJ32945), a TRK-fused gene (TFG) pseudogene and a CpG island, complete sequence Length = 128216 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttctattgcttatggcaaat 118 |||||||||||||||||||| Sbjct: 55862 ttctattgcttatggcaaat 55881
>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20, complete sequence Length = 139421 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ggccgccgacgagcttgagg 316 |||||||||||||||||||| Sbjct: 110220 ggccgccgacgagcttgagg 110239
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ggccgccgacgagcttgagg 316 |||||||||||||||||||| Sbjct: 14930442 ggccgccgacgagcttgagg 14930461
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ggccgccgacgagcttgagg 316 |||||||||||||||||||| Sbjct: 28350077 ggccgccgacgagcttgagg 28350096
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ggccgccgacgagcttgagg 316 |||||||||||||||||||| Sbjct: 30832078 ggccgccgacgagcttgagg 30832097
>gb|AC018887.10| Homo sapiens BAC clone RP11-419E14 from 2, complete sequence Length = 189466 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 atatatgtacgtttgtatat 227 |||||||||||||||||||| Sbjct: 169067 atatatgtacgtttgtatat 169048
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 aacttatatatgatgtcttt 25 |||||||||||||||||||| Sbjct: 320903 aacttatatatgatgtcttt 320922
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ggccgccgacgagcttgagg 316 |||||||||||||||||||| Sbjct: 62655 ggccgccgacgagcttgagg 62674
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ggccgccgacgagcttgagg 316 |||||||||||||||||||| Sbjct: 148106 ggccgccgacgagcttgagg 148125
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ggccgccgacgagcttgagg 316 |||||||||||||||||||| Sbjct: 15655 ggccgccgacgagcttgagg 15674
>dbj|AK108113.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-C02, full insert sequence Length = 1138 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ggccgccgacgagcttgagg 316 |||||||||||||||||||| Sbjct: 102 ggccgccgacgagcttgagg 121
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ggccgccgacgagcttgagg 316 |||||||||||||||||||| Sbjct: 59918 ggccgccgacgagcttgagg 59937
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ggccgccgacgagcttgagg 316 |||||||||||||||||||| Sbjct: 14938683 ggccgccgacgagcttgagg 14938702
>gb|AF018256.1|AF018256 Ambystoma tigrinum glutamate transporter 1 (sEAAT1) mRNA, complete cds Length = 1980 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 tctgcaccttcttcttggcc 457 |||||||||||||||||||| Sbjct: 265 tctgcaccttcttcttggcc 246 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,874,245 Number of Sequences: 3902068 Number of extensions: 3874245 Number of successful extensions: 66974 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66590 Number of HSP's gapped (non-prelim): 373 length of query: 640 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 617 effective length of database: 17,143,297,704 effective search space: 10577414683368 effective search space used: 10577414683368 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
