>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 64     gcgcggtgccgaggccgcggcga 86
              |||||||||||||||||||||||
Sbjct: 599791 gcgcggtgccgaggccgcggcga 599813

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 64     gcgcggtgccgaggccgcggcga 86
              |||||||||||||||||||||||
Sbjct: 326663 gcgcggtgccgaggccgcggcga 326641

>ref|NM_189853.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1008

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 60  aggcgcgcggtgccgaggccgcggcgaggc 89
           |||||||| |||||| ||||||||||||||
Sbjct: 767 aggcgcgccgtgccgcggccgcggcgaggc 796

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 60       aggcgcgcggtgccgaggccgcggcgaggc 89
                |||||||| |||||| ||||||||||||||
Sbjct: 25580745 aggcgcgccgtgccgcggccgcggcgaggc 25580774

>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0594D10
          Length = 143200

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 60    aggcgcgcggtgccgaggccgcggcgaggc 89
             |||||||| |||||| ||||||||||||||
Sbjct: 34718 aggcgcgccgtgccgcggccgcggcgaggc 34747

>dbj|AP004309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0560B08
          Length = 128098

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 60     aggcgcgcggtgccgaggccgcggcgaggc 89
              |||||||| |||||| ||||||||||||||
Sbjct: 118015 aggcgcgccgtgccgcggccgcggcgaggc 118044

>emb|AL008638.1|HS992D9 Human DNA sequence from clone CTA-992D9 on chromosome 22q12.1,
            complete sequence
          Length = 155147

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 244  ctgcttctggtcttgttcagg 264
            |||||||||||||||||||||
Sbjct: 1061 ctgcttctggtcttgttcagg 1041

>gb|BC076448.1| Danio rerio zgc:91818, mRNA (cDNA clone MGC:91818 IMAGE:7036609),
           complete cds
          Length = 1619

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 atcatttatatggacaaaac 241
           ||||||||||||||||||||
Sbjct: 844 atcatttatatggacaaaac 863

>gb|AC132413.3| Mus musculus BAC clone RP23-375I11 from chromosome 1, complete sequence
          Length = 191541

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    caggagaataaaaaagttgg 280
              ||||||||||||||||||||
Sbjct: 185284 caggagaataaaaaagttgg 185303

>gb|AC121566.3| Mus musculus BAC clone RP23-225D10 from 1, complete sequence
          Length = 152435

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   caggagaataaaaaagttgg 280
             ||||||||||||||||||||
Sbjct: 37215 caggagaataaaaaagttgg 37234

>gb|AC110221.6| Mus musculus chromosome 3, clone RP24-567P14, complete sequence
          Length = 138203

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   gcagttcaacaaggcttacc 166
             ||||||||||||||||||||
Sbjct: 53178 gcagttcaacaaggcttacc 53159

>emb|AL512639.8| Human DNA sequence from clone RP11-346G21 on chromosome 9, complete
             sequence
          Length = 164774

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   ggagaataaaaaagttggga 282
             ||||||||||||||||||||
Sbjct: 19381 ggagaataaaaaagttggga 19400

>emb|AL162591.16| Human DNA sequence from clone RP11-350G8 on chromosome 1 Contains the
             3' end of the AQP10 gene for aquaporin 10, the ATP8B2 gene
             for ATPase, Class I, type 8B, member 2, a mitochondrial
             ribosomal protein S33 (MRPS33) pseudogene, a novel gene,
             the IL6R gene for interleukin 6 receptor, a proteasome
             (prosome, macropain) 26S subunit, non-ATPase, 8 (PSMD8)
             pseduogene, a novel gene (LOC126669), the 5' end of a
             novel gene (DKFZp434M202) and a CpG island, complete
             sequence
          Length = 201167

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    gaggccgcggcgaggccccg 93
             ||||||||||||||||||||
Sbjct: 21839 gaggccgcggcgaggccccg 21820

>ref|NM_001002693.1| Danio rerio zgc:91818 (zgc:91818), mRNA
          Length = 1619

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 atcatttatatggacaaaac 241
           ||||||||||||||||||||
Sbjct: 844 atcatttatatggacaaaac 863

>gb|AC011120.11| Homo sapiens chromosome 17, clone RP11-171G2, complete sequence
          Length = 167746

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 236    caaaacatctgcttctggtc 255
              ||||||||||||||||||||
Sbjct: 121129 caaaacatctgcttctggtc 121148

>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 57      tccaggcgcgcggtgccgag 76
               ||||||||||||||||||||
Sbjct: 3989495 tccaggcgcgcggtgccgag 3989476

>gb|AC096728.3| Homo sapiens BAC clone RP11-53C16 from 4, complete sequence
          Length = 82696

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    tggaagctgccaaatctcca 60
             ||||||||||||||||||||
Sbjct: 10514 tggaagctgccaaatctcca 10495

>gb|AC011737.10| Homo sapiens BAC clone RP11-33N4 from 2, complete sequence
          Length = 176709

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 259   ttcaggagaataaaaaagtt 278
             ||||||||||||||||||||
Sbjct: 55939 ttcaggagaataaaaaagtt 55920

>ref|NM_001010846.1| Homo sapiens Src homology 2 domain containing E (SHE), mRNA
          Length = 6243

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 74 gaggccgcggcgaggccccg 93
          ||||||||||||||||||||
Sbjct: 67 gaggccgcggcgaggccccg 48

>gb|AC167563.3| Mus musculus BAC clone RP24-392I11 from chromosome 16, complete
             sequence
          Length = 201682

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   tcttgttcaggagaataaaa 273
             ||||||||||||||||||||
Sbjct: 90224 tcttgttcaggagaataaaa 90243

>gb|AC102895.7| Mus musculus chromosome 15, clone RP24-356D22, complete sequence
          Length = 165778

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   catcatttatatggacaaaa 240
             ||||||||||||||||||||
Sbjct: 10361 catcatttatatggacaaaa 10342

>dbj|AK115260.1| Ciona intestinalis cDNA, clone:cieg041m22, full insert sequence
          Length = 1355

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  tcttggaagctgccaaatct 57
           ||||||||||||||||||||
Sbjct: 241 tcttggaagctgccaaatct 260

>gb|AC154874.9| Mus musculus chromosome 15, clone RP23-227M7, complete sequence
          Length = 206926

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 221  catcatttatatggacaaaa 240
            ||||||||||||||||||||
Sbjct: 5511 catcatttatatggacaaaa 5530

>gb|AC080037.11| Homo sapiens chromosome 17, clone CTD-3010D24, complete sequence
          Length = 248996

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 236    caaaacatctgcttctggtc 255
              ||||||||||||||||||||
Sbjct: 228244 caaaacatctgcttctggtc 228263


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,463,401
Number of Sequences: 3902068
Number of extensions: 2463401
Number of successful extensions: 49946
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49744
Number of HSP's gapped (non-prelim): 202
length of query: 282
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 260
effective length of database: 17,147,199,772
effective search space: 4458271940720
effective search space used: 4458271940720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)