>gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 genomic sequence, complete
              sequence
          Length = 149978

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 158    ggagcggcggggaaggggcggc 179
              ||||||||||||||||||||||
Sbjct: 109362 ggagcggcggggaaggggcggc 109383

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 158      ggagcggcggggaaggggcggc 179
                ||||||||||||||||||||||
Sbjct: 16491263 ggagcggcggggaaggggcggc 16491284

>dbj|AK066946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089G05, full
           insert sequence
          Length = 575

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 158 ggagcggcggggaaggggcggc 179
           ||||||||||||||||||||||
Sbjct: 64  ggagcggcggggaaggggcggc 85

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 158      ggagcggcggggaaggggcggc 179
                ||||||||||||||||||||||
Sbjct: 16499504 ggagcggcggggaaggggcggc 16499525

>gb|AC158364.4| Mus musculus BAC clone RP23-187J8 from chromosome 8, complete sequence
          Length = 208153

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 136    tgagctccagggccagggcca 156
              |||||||||||||||||||||
Sbjct: 194190 tgagctccagggccagggcca 194210

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 139     gctccagggccagggccatgg 159
               |||||||||||||||||||||
Sbjct: 2325864 gctccagggccagggccatgg 2325884

>gb|AC132126.3| Mus musculus BAC clone RP23-400E10 from 8, complete sequence
          Length = 204800

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 136    tgagctccagggccagggcca 156
              |||||||||||||||||||||
Sbjct: 154368 tgagctccagggccagggcca 154348

>ref|XM_880076.1| PREDICTED: Bos taurus similar to sine oculis homeobox homolog 5,
           transcript variant 2 (LOC513676), mRNA
          Length = 1746

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 161 gcggcggggaaggggcggct 180
           ||||||||||||||||||||
Sbjct: 499 gcggcggggaaggggcggct 480

>ref|XM_591403.2| PREDICTED: Bos taurus similar to sine oculis homeobox homolog 5,
           transcript variant 1 (LOC513676), mRNA
          Length = 2543

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 161 gcggcggggaaggggcggct 180
           ||||||||||||||||||||
Sbjct: 499 gcggcggggaaggggcggct 480

>ref|NM_175875.3| Homo sapiens sine oculis homeobox homolog 5 (Drosophila) (SIX5),
           mRNA
          Length = 3145

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 161 gcggcggggaaggggcggct 180
           ||||||||||||||||||||
Sbjct: 674 gcggcggggaaggggcggct 655

>ref|XM_808640.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053509657.20) partial mRNA
          Length = 10443

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  ggagcggcggggaaggggcg 177
            ||||||||||||||||||||
Sbjct: 5981 ggagcggcggggaaggggcg 6000

>ref|XM_811214.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053506613.130) partial mRNA
          Length = 10452

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  ggagcggcggggaaggggcg 177
            ||||||||||||||||||||
Sbjct: 5987 ggagcggcggggaaggggcg 6006

>ref|XM_813798.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053510197.110) partial mRNA
          Length = 10452

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  ggagcggcggggaaggggcg 177
            ||||||||||||||||||||
Sbjct: 5981 ggagcggcggggaaggggcg 6000

>ref|XM_849979.1| PREDICTED: Canis familiaris similar to sine oculis homeobox homolog
           5 (LOC612242), mRNA
          Length = 1761

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 161 gcggcggggaaggggcggct 180
           ||||||||||||||||||||
Sbjct: 530 gcggcggggaaggggcggct 511

>emb|AL121753.30|HSDJ614O4 Human DNA sequence from clone RP4-614O4 on chromosome 20q11.1-12
             Contains the C20orf127 locus for a metallothionein protein
             pseudogene, the MMP24 gene for matrix metalloproteinase 24
             (membrane-inserted), a novel gene, the ITGB4BP gene for
             integrin beta 4 binding protein, the C20orf120 gene for
             chromosome 20 open reading frame 120, the C20orf128 gene
             for chromosome 20 open reading frame 128, the 3' end of
             the C20orf44 gene for chromosome 20 open reading frame 44
             and three CpG islands, complete sequence
          Length = 150481

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   ccagggccagggccatggag 161
             ||||||||||||||||||||
Sbjct: 64397 ccagggccagggccatggag 64416

>gb|AC020656.33| Homo sapiens 12 BAC RP11-1143G9 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 123070

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  agcggcggggaaggggcggc 179
            ||||||||||||||||||||
Sbjct: 8332 agcggcggggaaggggcggc 8313

>gb|AC074212.5| Homo sapiens chromosome 19 clone LLNLF-145F10, complete sequence
          Length = 40311

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   gcggcggggaaggggcggct 180
             ||||||||||||||||||||
Sbjct: 29386 gcggcggggaaggggcggct 29405

>gb|AC011530.6| Homo sapiens chromosome 19 clone LLNLR-227G9, complete sequence
          Length = 45572

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   gcggcggggaaggggcggct 180
             ||||||||||||||||||||
Sbjct: 40528 gcggcggggaaggggcggct 40509

>gb|AC073447.8| Homo sapiens chromosome 2, clone RP13-504N18, complete sequence
          Length = 135325

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    gaccagtgaggcgaggcttg 56
             ||||||||||||||||||||
Sbjct: 84845 gaccagtgaggcgaggcttg 84826

>ref|XM_677830.1| PREDICTED: Danio rerio similar to synArfGEF (LOC555340), mRNA
          Length = 3213

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 166  ggggaaggggcggctgcttctgct 189
            |||||||||||||||||| |||||
Sbjct: 3100 ggggaaggggcggctgctgctgct 3077

>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    ctccagggccagggccatgg 159
              ||||||||||||||||||||
Sbjct: 982064 ctccagggccagggccatgg 982045

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 160     agcggcggggaaggggcggc 179
               ||||||||||||||||||||
Sbjct: 1549744 agcggcggggaaggggcggc 1549725

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 158     ggagcggcggggaaggggcg 177
               ||||||||||||||||||||
Sbjct: 2322191 ggagcggcggggaaggggcg 2322172

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 161     gcggcggggaaggggcggct 180
               ||||||||||||||||||||
Sbjct: 8815952 gcggcggggaaggggcggct 8815971

>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0473D02
          Length = 146185

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   ggagcggcggggaaggggcg 177
             ||||||||||||||||||||
Sbjct: 69690 ggagcggcggggaaggggcg 69671

>emb|AL928990.4| Zebrafish DNA sequence from clone CH211-11F8, complete sequence
          Length = 185618

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 166   ggggaaggggcggctgcttctgct 189
             |||||||||||||||||| |||||
Sbjct: 77392 ggggaaggggcggctgctgctgct 77369

>emb|AJ327641.1|HSA327641 Homo sapiens genomic sequence surrounding NotI site, clone NR5-HA6C
          Length = 637

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 161 gcggcggggaaggggcggct 180
           ||||||||||||||||||||
Sbjct: 71  gcggcggggaaggggcggct 90

>gb|AC016473.2|AC016473 Homo sapiens chromosome 17, clone RP11-99J11, complete sequence
          Length = 55028

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    gaccagtgaggcgaggcttg 56
             ||||||||||||||||||||
Sbjct: 54125 gaccagtgaggcgaggcttg 54106

>dbj|AK066886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088C17, full
           insert sequence
          Length = 930

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 agcggcggggaaggggcggc 179
           ||||||||||||||||||||
Sbjct: 502 agcggcggggaaggggcggc 521

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 139     gctccagggccagggccatg 158
               ||||||||||||||||||||
Sbjct: 1673712 gctccagggccagggccatg 1673731

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 160     agcggcggggaaggggcggc 179
               ||||||||||||||||||||
Sbjct: 1549744 agcggcggggaaggggcggc 1549725

>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 183385

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   agcggcggggaaggggcggc 179
             ||||||||||||||||||||
Sbjct: 75988 agcggcggggaaggggcggc 76007

>gb|AC002090.1|AC002090 Genomic sequence from Human 17, complete sequence
          Length = 137769

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     gaccagtgaggcgaggcttg 56
              ||||||||||||||||||||
Sbjct: 136674 gaccagtgaggcgaggcttg 136693

>emb|X84813.1|HSDMAHP H.sapiens DMAHP gene
          Length = 5800

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 161  gcggcggggaaggggcggct 180
            ||||||||||||||||||||
Sbjct: 1581 gcggcggggaaggggcggct 1562


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,783,275
Number of Sequences: 3902068
Number of extensions: 1783275
Number of successful extensions: 148256
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 147348
Number of HSP's gapped (non-prelim): 908
length of query: 220
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 198
effective length of database: 17,147,199,772
effective search space: 3395145554856
effective search space used: 3395145554856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)