ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast79h07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ILV5_PEA (O82043) Ketol-acid reductoisomerase, chloroplast precu... 104 9e-23
2ILV5_SPIOL (Q01292) Ketol-acid reductoisomerase, chloroplast pre... 103 1e-22
3ILV5_ARATH (Q05758) Ketol-acid reductoisomerase, chloroplast pre... 102 4e-22

>ILV5_PEA (O82043) Ketol-acid reductoisomerase, chloroplast precursor (EC|
           1.1.1.86) (Acetohydroxy-acid reductoisomerase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 581

 Score =  104 bits (260), Expect = 9e-23
 Identities = 48/57 (84%), Positives = 55/57 (96%)
 Frame = +2

Query: 278 SLDFDTAVFNKEKVSLAGHEEYIVRGGRNLFPLLPEAFKGVKQIGVIGWGSQGPAQA 448
           SLDF+T+VF KE+V+LAGHEEYIVRGGR+LF LLP+AFKG+KQIGVIGWGSQGPAQA
Sbjct: 69  SLDFETSVFKKERVNLAGHEEYIVRGGRDLFHLLPDAFKGIKQIGVIGWGSQGPAQA 125



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>ILV5_SPIOL (Q01292) Ketol-acid reductoisomerase, chloroplast precursor (EC|
           1.1.1.86) (Acetohydroxy-acid reductoisomerase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 595

 Score =  103 bits (258), Expect = 1e-22
 Identities = 46/57 (80%), Positives = 54/57 (94%)
 Frame = +2

Query: 278 SLDFDTAVFNKEKVSLAGHEEYIVRGGRNLFPLLPEAFKGVKQIGVIGWGSQGPAQA 448
           + DFD++VF KEKV+L+GH+EYIVRGGRNLFPLLP+AFKG+KQIGVIGWGSQ PAQA
Sbjct: 85  TFDFDSSVFKKEKVTLSGHDEYIVRGGRNLFPLLPDAFKGIKQIGVIGWGSQAPAQA 141



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>ILV5_ARATH (Q05758) Ketol-acid reductoisomerase, chloroplast precursor (EC|
           1.1.1.86) (Acetohydroxy-acid reductoisomerase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 591

 Score =  102 bits (254), Expect = 4e-22
 Identities = 48/57 (84%), Positives = 54/57 (94%)
 Frame = +2

Query: 278 SLDFDTAVFNKEKVSLAGHEEYIVRGGRNLFPLLPEAFKGVKQIGVIGWGSQGPAQA 448
           SLDF+T+VF KEKVSLAG+EEYIVRGGR+LF  LP+AFKG+KQIGVIGWGSQGPAQA
Sbjct: 79  SLDFETSVFKKEKVSLAGYEEYIVRGGRDLFKHLPDAFKGIKQIGVIGWGSQGPAQA 135


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.140    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,920,890
Number of Sequences: 219361
Number of extensions: 359643
Number of successful extensions: 1219
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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