ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast79h07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016666.1| Zea mays clone Contig499 mRNA sequence Length = 1992 Score = 234 bits (118), Expect = 2e-58 Identities = 195/221 (88%) Strand = Plus / Plus Query: 218 cgccgccgggcggtcgccgccatggtcgcggccccggccaaggtcggcgccgccatgccc 277 |||||||||| ||||||||||||||| | || ||| | |||||| |||||||||| Sbjct: 179 cgccgccgggacgtcgccgccatggtctccgcgccgccggccgtcggcaccgccatgccg 238 Query: 278 tcgctcgacttcgacaccgccgtcttcaacaaggagaaggtctccctcgccggccacgag 337 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 239 tcgctcgacttcgacacctccgtcttcaacaaggagaaggtctccctcgccggccacgac 298 Query: 338 gagtacatcgtcaggggcgggcggaacctcttcccgctgctcccggaggccttcaagggc 397 ||||||||||| | |||||| ||||||| ||||||||||| ||||||| |||||||| Sbjct: 299 gagtacatcgtgcgcggcgggaggaacctgttcccgctgctttcggaggcgttcaagggg 358 Query: 398 gtcaagcagatcggngtcatcggatggggctcacagggtcc 438 |||||||||||||| ||||| ||||||||||| |||||||| Sbjct: 359 gtcaagcagatcggagtcattggatggggctcgcagggtcc 399
>dbj|AK065295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N13, full insert sequence Length = 1983 Score = 230 bits (116), Expect = 3e-57 Identities = 190/215 (88%) Strand = Plus / Plus Query: 221 cgccgggcggtcgccgccatggtcgcggccccggccaaggtcggcgccgccatgccctcg 280 ||||| |||||| |||||||||||||||| ||| | ||||| ||||||||||| ||| Sbjct: 207 cgccgcgcggtcaccgccatggtcgcggcgccgccggccgtcggggccgccatgccgtcg 266 Query: 281 ctcgacttcgacaccgccgtcttcaacaaggagaaggtctccctcgccggccacgaggag 340 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 ctcgacttcgacacatccgtcttcaacaaggagaaggtctccctcgccggccacgaggag 326 Query: 341 tacatcgtcaggggcgggcggaacctcttcccgctgctcccggaggccttcaagggcgtc 400 || ||||| ||||| ||| ||||||| ||||||||||| || ||||| ||||||||| || Sbjct: 327 tatatcgtgaggggtgggaggaacctgttcccgctgcttcccgaggcgttcaagggcatc 386 Query: 401 aagcagatcggngtcatcggatggggctcacaggg 435 ||||||||||| || || ||||||||||| ||||| Sbjct: 387 aagcagatcggagtgattggatggggctctcaggg 421 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 120 cccaccccaaaaccctagccgccgccg 146 ||||||||||||||||||||||||||| Sbjct: 94 cccaccccaaaaccctagccgccgccg 120
>gb|AY103782.1| Zea mays PCO080860 mRNA sequence Length = 2117 Score = 226 bits (114), Expect = 5e-56 Identities = 194/221 (87%) Strand = Plus / Plus Query: 218 cgccgccgggcggtcgccgccatggtcgcggccccggccaaggtcggcgccgccatgccc 277 |||||||||| ||||||||||||||| | || ||| | |||||| |||||||||| Sbjct: 271 cgccgccgggacgtcgccgccatggtctccgcgccgccggccgtcggcaccgccatgccg 330 Query: 278 tcgctcgacttcgacaccgccgtcttcaacaaggagaaggtctccctcgccggccacgag 337 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 331 tcgctcgacttcgacacctccgtcttcaacaaggagaaggtctccctcgccggccacgac 390 Query: 338 gagtacatcgtcaggggcgggcggaacctcttcccgctgctcccggaggccttcaagggc 397 ||||||||||| | |||||| ||||||| ||||||||||| ||||||| |||||||| Sbjct: 391 gagtacatcgtgcgcggcgggaggaacctgttcccgctgctttcggaggcgttcaagggg 450 Query: 398 gtcaagcagatcggngtcatcggatggggctcacagggtcc 438 |||||||||||||| || || ||||||||||| |||||||| Sbjct: 451 gtcaagcagatcggagttattggatggggctcgcagggtcc 491 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 122 caccccaaaaccctagccgccgccgg 147 ||||| |||||||||||||||||||| Sbjct: 148 cacccaaaaaccctagccgccgccgg 173
>gb|BT009123.1| Triticum aestivum clone wl1n.pk0013.e12:fis, full insert mRNA sequence Length = 1957 Score = 153 bits (77), Expect = 6e-34 Identities = 157/184 (85%) Strand = Plus / Plus Query: 261 tcggcgccgccatgccctcgctcgacttcgacaccgccgtcttcaacaaggagaaggtct 320 ||||| |||||||||| |||||||||||||| ||| |||||||||| ||||| ||||| | Sbjct: 217 tcggcaccgccatgccgtcgctcgacttcgagacctccgtcttcaagaaggaaaaggtgt 276 Query: 321 ccctcgccggccacgaggagtacatcgtcaggggcgggcggaacctcttcccgctgctcc 380 |||| |||||||| |||||||| || || ||||| ||| || | || ||||||||| | | Sbjct: 277 ccctggccggccatgaggagtatattgtgaggggtgggagggatctgttcccgctgttac 336 Query: 381 cggaggccttcaagggcgtcaagcagatcggngtcatcggatggggctcacagggtccgg 440 |||||||||||||||| |||| |||||||| || ||||| |||||||| |||||||| | Sbjct: 337 cggaggccttcaagggaatcaaacagatcggtgtaatcggctggggctcgcagggtcctg 396 Query: 441 cgca 444 |||| Sbjct: 397 cgca 400
>gb|AY103707.1| Zea mays PCO072121 mRNA sequence Length = 1985 Score = 153 bits (77), Expect = 6e-34 Identities = 157/184 (85%) Strand = Plus / Plus Query: 261 tcggcgccgccatgccctcgctcgacttcgacaccgccgtcttcaacaaggagaaggtct 320 ||||| |||||||||| |||||||||||||| ||| |||||||||| ||||| ||||| | Sbjct: 228 tcggcaccgccatgccgtcgctcgacttcgagacctccgtcttcaagaaggaaaaggtgt 287 Query: 321 ccctcgccggccacgaggagtacatcgtcaggggcgggcggaacctcttcccgctgctcc 380 |||| |||||||| |||||||| || || ||||| ||| || | || ||||||||| | | Sbjct: 288 ccctggccggccatgaggagtatattgtgaggggtgggagggatctgttcccgctgttac 347 Query: 381 cggaggccttcaagggcgtcaagcagatcggngtcatcggatggggctcacagggtccgg 440 |||||||||||||||| |||| |||||||| || ||||| |||||||| |||||||| | Sbjct: 348 cggaggccttcaagggaatcaaacagatcggtgtaatcggctggggctcgcagggtcctg 407 Query: 441 cgca 444 |||| Sbjct: 408 cgca 411
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 143 bits (72), Expect = 6e-31 Identities = 108/120 (90%) Strand = Plus / Minus Query: 221 cgccgggcggtcgccgccatggtcgcggccccggccaaggtcggcgccgccatgccctcg 280 ||||| |||||| |||||||||||||||| ||| | ||||| ||||||||||| ||| Sbjct: 146326 cgccgcgcggtcaccgccatggtcgcggcgccgccggccgtcggggccgccatgccgtcg 146267 Query: 281 ctcgacttcgacaccgccgtcttcaacaaggagaaggtctccctcgccggccacgaggag 340 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146266 ctcgacttcgacacatccgtcttcaacaaggagaaggtctccctcgccggccacgaggag 146207 Score = 89.7 bits (45), Expect = 7e-15 Identities = 83/96 (86%) Strand = Plus / Minus Query: 339 agtacatcgtcaggggcgggcggaacctcttcccgctgctcccggaggccttcaagggcg 398 |||| ||||| ||||| ||| ||||||| ||||||||||| || ||||| ||||||||| Sbjct: 146106 agtatatcgtgaggggtgggaggaacctgttcccgctgcttcccgaggcgttcaagggca 146047 Query: 399 tcaagcagatcggngtcatcggatggggctcacagg 434 ||||||||||||| || || ||||||||||| |||| Sbjct: 146046 tcaagcagatcggagtgattggatggggctctcagg 146011 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 120 cccaccccaaaaccctagccgccgccg 146 ||||||||||||||||||||||||||| Sbjct: 146439 cccaccccaaaaccctagccgccgccg 146413
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 143 bits (72), Expect = 6e-31 Identities = 108/120 (90%) Strand = Plus / Minus Query: 221 cgccgggcggtcgccgccatggtcgcggccccggccaaggtcggcgccgccatgccctcg 280 ||||| |||||| |||||||||||||||| ||| | ||||| ||||||||||| ||| Sbjct: 28362084 cgccgcgcggtcaccgccatggtcgcggcgccgccggccgtcggggccgccatgccgtcg 28362025 Query: 281 ctcgacttcgacaccgccgtcttcaacaaggagaaggtctccctcgccggccacgaggag 340 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28362024 ctcgacttcgacacatccgtcttcaacaaggagaaggtctccctcgccggccacgaggag 28361965 Score = 89.7 bits (45), Expect = 7e-15 Identities = 83/96 (86%) Strand = Plus / Minus Query: 339 agtacatcgtcaggggcgggcggaacctcttcccgctgctcccggaggccttcaagggcg 398 |||| ||||| ||||| ||| ||||||| ||||||||||| || ||||| ||||||||| Sbjct: 28361864 agtatatcgtgaggggtgggaggaacctgttcccgctgcttcccgaggcgttcaagggca 28361805 Query: 399 tcaagcagatcggngtcatcggatggggctcacagg 434 ||||||||||||| || || ||||||||||| |||| Sbjct: 28361804 tcaagcagatcggagtgattggatggggctctcagg 28361769 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 120 cccaccccaaaaccctagccgccgccg 146 ||||||||||||||||||||||||||| Sbjct: 28362197 cccaccccaaaaccctagccgccgccg 28362171 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 122 caccccaaaaccctagccgccgccg 146 ||||||||||||||||||||||||| Sbjct: 8395480 caccccaaaaccctagccgccgccg 8395504
>ref|NM_192395.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1746 Score = 133 bits (67), Expect = 5e-28 Identities = 150/178 (84%) Strand = Plus / Plus Query: 261 tcggcgccgccatgccctcgctcgacttcgacaccgccgtcttcaacaaggagaaggtct 320 |||| ||| ||||||| ||||| |||||||| || |||||||||| ||||||||||| | Sbjct: 191 tcggggccaccatgccgtcgctggacttcgagacatccgtcttcaagaaggagaaggtgt 250 Query: 321 ccctcgccggccacgaggagtacatcgtcaggggcgggcggaacctcttcccgctgctcc 380 | || || ||||| || ||||| || || ||||||||| |||| || ||||||||||| | Sbjct: 251 ctctagctggccatgacgagtatattgtgaggggcgggaggaatctgttcccgctgctgc 310 Query: 381 cggaggccttcaagggcgtcaagcagatcggngtcatcggatggggctcacagggtcc 438 ||||||| |||||||| ||||||||||||| || ||||||||||| || |||||||| Sbjct: 311 cggaggcgttcaaggggatcaagcagatcggcgtaatcggatggggttctcagggtcc 368
>dbj|AK072075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013115K02, full insert sequence Length = 1917 Score = 125 bits (63), Expect = 1e-25 Identities = 140/166 (84%) Strand = Plus / Plus Query: 273 tgccctcgctcgacttcgacaccgccgtcttcaacaaggagaaggtctccctcgccggcc 332 |||| ||||| |||||||| || |||||||||| ||||||||||| || || || |||| Sbjct: 154 tgccgtcgctggacttcgagacatccgtcttcaagaaggagaaggtgtctctagctggcc 213 Query: 333 acgaggagtacatcgtcaggggcgggcggaacctcttcccgctgctcccggaggccttca 392 | || ||||| || || ||||||||| |||| || ||||||||||| |||||||| |||| Sbjct: 214 atgacgagtatattgtgaggggcgggaggaatctgttcccgctgctgccggaggcgttca 273 Query: 393 agggcgtcaagcagatcggngtcatcggatggggctcacagggtcc 438 |||| ||||||||||||| || ||||||||||| || |||||||| Sbjct: 274 aggggatcaagcagatcggcgtaatcggatggggttctcagggtcc 319
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 93.7 bits (47), Expect = 5e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 262 cggcgccgccatgccctcgctcgacttcgacaccgccgtcttcaacaaggagaaggtctc 321 ||||||||||||| | |||||||||||||| || | ||||||||||||||||||||| Sbjct: 5416315 cggcgccgccatgacgtcgctcgacttcgagacatctatcttcaacaaggagaaggtctt 5416374 Query: 322 cctcgccggccacgaggag 340 ||||||||||||||||||| Sbjct: 5416375 cctcgccggccacgaggag 5416393 Score = 83.8 bits (42), Expect = 4e-13 Identities = 68/77 (88%) Strand = Plus / Plus Query: 350 aggggcgggcggaacctcttcccgctgctcccggaggccttcaagggcgtcaagcagatc 409 ||||||||| |||| || ||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 26385851 aggggcgggaggaatctgttcccgctgctgccggaggcgttcaaggggatcaagcagatc 26385910 Query: 410 ggngtcatcggatgggg 426 || || ||||||||||| Sbjct: 26385911 ggcgtaatcggatgggg 26385927 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 261 tcggcgccgccatgccctcgctcgacttcgacaccgccgtcttcaacaaggagaaggt 318 |||| ||| ||||||| ||||| |||||||| || |||||||||| ||||||||||| Sbjct: 26385661 tcggggccaccatgccgtcgctggacttcgagacatccgtcttcaagaaggagaaggt 26385718 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 124 ccccaaaaccctagccgccgccg 146 ||||||||||||||||||||||| Sbjct: 3985707 ccccaaaaccctagccgccgccg 3985729
>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1015E06 Length = 164583 Score = 93.7 bits (47), Expect = 5e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 262 cggcgccgccatgccctcgctcgacttcgacaccgccgtcttcaacaaggagaaggtctc 321 ||||||||||||| | |||||||||||||| || | ||||||||||||||||||||| Sbjct: 13155 cggcgccgccatgacgtcgctcgacttcgagacatctatcttcaacaaggagaaggtctt 13214 Query: 322 cctcgccggccacgaggag 340 ||||||||||||||||||| Sbjct: 13215 cctcgccggccacgaggag 13233
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 83.8 bits (42), Expect = 4e-13 Identities = 68/77 (88%) Strand = Plus / Plus Query: 350 aggggcgggcggaacctcttcccgctgctcccggaggccttcaagggcgtcaagcagatc 409 ||||||||| |||| || ||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 59716 aggggcgggaggaatctgttcccgctgctgccggaggcgttcaaggggatcaagcagatc 59775 Query: 410 ggngtcatcggatgggg 426 || || ||||||||||| Sbjct: 59776 ggcgtaatcggatgggg 59792 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 261 tcggcgccgccatgccctcgctcgacttcgacaccgccgtcttcaacaaggagaaggt 318 |||| ||| ||||||| ||||| |||||||| || |||||||||| ||||||||||| Sbjct: 59526 tcggggccaccatgccgtcgctggacttcgagacatccgtcttcaagaaggagaaggt 59583
>ref|NM_196741.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0094K20.16), mRNA Length = 294 Score = 63.9 bits (32), Expect = 4e-07 Identities = 64/75 (85%) Strand = Plus / Plus Query: 361 gaacctcttcccgctgctcccggaggccttcaagggcgtcaagcagatcggngtcatcgg 420 |||||| ||||||||||| || ||||| ||||||||| ||||| ||||| || ||||| Sbjct: 3 gaacctgttcccgctgcttcccgaggcgttcaagggcaataagcaaatcggagtgatcgg 62 Query: 421 atggggctcacaggg 435 ||||||||| ||||| Sbjct: 63 atggggctctcaggg 77
>dbj|AK120099.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022F17, full insert sequence Length = 4310 Score = 63.9 bits (32), Expect = 4e-07 Identities = 64/75 (85%) Strand = Plus / Plus Query: 361 gaacctcttcccgctgctcccggaggccttcaagggcgtcaagcagatcggngtcatcgg 420 |||||| ||||||||||| || ||||| ||||||||| ||||| ||||| || ||||| Sbjct: 2715 gaacctgttcccgctgcttcccgaggcgttcaagggcaataagcaaatcggagtgatcgg 2774 Query: 421 atggggctcacaggg 435 ||||||||| ||||| Sbjct: 2775 atggggctctcaggg 2789
>dbj|AK100611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107L23, full insert sequence Length = 3082 Score = 63.9 bits (32), Expect = 4e-07 Identities = 64/75 (85%) Strand = Plus / Plus Query: 361 gaacctcttcccgctgctcccggaggccttcaagggcgtcaagcagatcggngtcatcgg 420 |||||| ||||||||||| || ||||| ||||||||| ||||| ||||| || ||||| Sbjct: 1083 gaacctgttcccgctgcttcccgaggcgttcaagggcaataagcaaatcggagtgatcgg 1142 Query: 421 atggggctcacaggg 435 ||||||||| ||||| Sbjct: 1143 atggggctctcaggg 1157
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 61.9 bits (31), Expect = 2e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 361 gaacctcttcccgctgctcccggaggccttcaagggcgtcaagcagatcggngtcatcgg 420 |||||| ||||||||||| || ||||| ||||||||| ||||| ||||| || ||||| Sbjct: 15649470 gaacctgttcccgctgcttcccgaggcgttcaagggcaataagcaaatcggagtgatcgg 15649411 Query: 421 atggggctcacagg 434 ||||||||| |||| Sbjct: 15649410 atggggctctcagg 15649397 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 86 gcggcgcccacctcctccaccctcgccccc 115 ||||||||||||| ||||| |||||||||| Sbjct: 17091776 gcggcgcccaccttctccagcctcgccccc 17091747 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 cggcgccgccatgccctcgc 281 |||||||||||||||||||| Sbjct: 14923888 cggcgccgccatgccctcgc 14923907
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 61.9 bits (31), Expect = 2e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 361 gaacctcttcccgctgctcccggaggccttcaagggcgtcaagcagatcggngtcatcgg 420 |||||| ||||||||||| || ||||| ||||||||| ||||| ||||| || ||||| Sbjct: 16009273 gaacctgttcccgctgcttcccgaggcgttcaagggcaataagcaaatcggagtgatcgg 16009332 Query: 421 atggggctcacagg 434 ||||||||| |||| Sbjct: 16009333 atggggctctcagg 16009346 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 121 ccaccccaaaaccctagccgccgccg 146 |||||||||||||||||||||||||| Sbjct: 21033751 ccaccccaaaaccctagccgccgccg 21033726 Score = 42.1 bits (21), Expect = 1.5 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 118 cccccaccccaaaa-ccctagccgccgcc 145 |||||||||||||| |||||||||||||| Sbjct: 16507082 cccccaccccaaaaaccctagccgccgcc 16507054
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 2e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 361 gaacctcttcccgctgctcccggaggccttcaagggcgtcaagcagatcggngtcatcgg 420 |||||| ||||||||||| || ||||| ||||||||| ||||| ||||| || ||||| Sbjct: 2846549 gaacctgttcccgctgcttcccgaggcgttcaagggcaataagcaaatcggagtgatcgg 2846608 Query: 421 atggggctcacagg 434 ||||||||| |||| Sbjct: 2846609 atggggctctcagg 2846622 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 cccaccccaaaaccctagccgccgc 144 |||||||| |||||||||||||||| Sbjct: 34518613 cccacccccaaaccctagccgccgc 34518637 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cttctccccggccgcctcgc 197 |||||||||||||||||||| Sbjct: 28936410 cttctccccggccgcctcgc 28936429
>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20, complete sequence Length = 193119 Score = 61.9 bits (31), Expect = 2e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 361 gaacctcttcccgctgctcccggaggccttcaagggcgtcaagcagatcggngtcatcgg 420 |||||| ||||||||||| || ||||| ||||||||| ||||| ||||| || ||||| Sbjct: 136836 gaacctgttcccgctgcttcccgaggcgttcaagggcaataagcaaatcggagtgatcgg 136777 Query: 421 atggggctcacagg 434 ||||||||| |||| Sbjct: 136776 atggggctctcagg 136763
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 61.9 bits (31), Expect = 2e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 361 gaacctcttcccgctgctcccggaggccttcaagggcgtcaagcagatcggngtcatcgg 420 |||||| ||||||||||| || ||||| ||||||||| ||||| ||||| || ||||| Sbjct: 114777 gaacctgttcccgctgcttcccgaggcgttcaagggcaataagcaaatcggagtgatcgg 114836 Query: 421 atggggctcacagg 434 ||||||||| |||| Sbjct: 114837 atggggctctcagg 114850
>dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1328_D07 Length = 155007 Score = 61.9 bits (31), Expect = 2e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 361 gaacctcttcccgctgctcccggaggccttcaagggcgtcaagcagatcggngtcatcgg 420 |||||| ||||||||||| || ||||| ||||||||| ||||| ||||| || ||||| Sbjct: 9486 gaacctgttcccgctgcttcccgaggcgttcaagggcaataagcaaatcggagtgatcgg 9545 Query: 421 atggggctcacagg 434 ||||||||| |||| Sbjct: 9546 atggggctctcagg 9559
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 61.9 bits (31), Expect = 2e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 361 gaacctcttcccgctgctcccggaggccttcaagggcgtcaagcagatcggngtcatcgg 420 |||||| ||||||||||| || ||||| ||||||||| ||||| ||||| || ||||| Sbjct: 15657711 gaacctgttcccgctgcttcccgaggcgttcaagggcaataagcaaatcggagtgatcgg 15657652 Query: 421 atggggctcacagg 434 ||||||||| |||| Sbjct: 15657651 atggggctctcagg 15657638 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 86 gcggcgcccacctcctccaccctcgccccc 115 ||||||||||||| ||||| |||||||||| Sbjct: 17100816 gcggcgcccaccttctccagcctcgccccc 17100787 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 cggcgccgccatgccctcgc 281 |||||||||||||||||||| Sbjct: 14932129 cggcgccgccatgccctcgc 14932148
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 121 ccaccccaaaaccctagccgccgccg 146 |||||||||||||||||||||||||| Sbjct: 125840 ccaccccaaaaccctagccgccgccg 125815
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 121 ccaccccaaaaccctagccgccgccg 146 |||||||||||||||||||||||||| Sbjct: 55051 ccaccccaaaaccctagccgccgccg 55026
>gb|AC105768.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1122_B08, complete sequence Length = 143955 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 122 caccccaaaaccctagccgccgccg 146 ||||||||||||||||||||||||| Sbjct: 116524 caccccaaaaccctagccgccgccg 116548
>ref|XM_550320.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2910 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 124 ccccaaaaccctagccgccgccg 146 ||||||||||||||||||||||| Sbjct: 62 ccccaaaaccctagccgccgccg 84
>gb|AC009222.4| Homo sapiens chromosome 17, clone RP11-429O1, complete sequence Length = 184304 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 gcccccttcccccaccccaaaac 132 ||||||||||||||||||||||| Sbjct: 47495 gcccccttcccccaccccaaaac 47473
>gb|AC024918.5| Homo sapiens chromosome 17, clone RP11-254J21, complete sequence Length = 172784 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 gcccccttcccccaccccaaaac 132 ||||||||||||||||||||||| Sbjct: 124460 gcccccttcccccaccccaaaac 124438
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 86 gcggcgcccacctcctccaccctcgcc 112 |||||| |||||||||||||||||||| Sbjct: 5030856 gcggcgaccacctcctccaccctcgcc 5030830
>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013F10 Length = 163095 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 124 ccccaaaaccctagccgccgccg 146 ||||||||||||||||||||||| Sbjct: 107611 ccccaaaaccctagccgccgccg 107633
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 86 gcggcgcccacctcctccaccctcgcc 112 |||||| |||||||||||||||||||| Sbjct: 72970 gcggcgaccacctcctccaccctcgcc 72944
>dbj|AK103230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123D13, full insert sequence Length = 2910 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 124 ccccaaaaccctagccgccgccg 146 ||||||||||||||||||||||| Sbjct: 62 ccccaaaaccctagccgccgccg 84
>dbj|AK071363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092F04, full insert sequence Length = 2303 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 86 gcggcgcccacctcctccaccctcgcc 112 |||||| |||||||||||||||||||| Sbjct: 1953 gcggcgaccacctcctccaccctcgcc 1927
>ref|NM_196977.1| Oryza sativa (japonica cultivar-group) putative plant disease resistant protein (OSJNBa0001K12.15), mRNA Length = 5445 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 86 gcggcgcccacctcctccaccctcgccccc 115 ||||||||||||| ||||| |||||||||| Sbjct: 140 gcggcgcccaccttctccagcctcgccccc 111
>ref|XM_507356.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.28 mRNA Length = 1487 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 ccaccccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||||| Sbjct: 12 ccaccacaaaaccctagccgccgccg 37
>ref|XM_476865.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1395 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 ccaccccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||||| Sbjct: 16 ccaccacaaaaccctagccgccgccg 41
>ref|XM_507355.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.28 mRNA Length = 1641 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 ccaccccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||||| Sbjct: 16 ccaccacaaaaccctagccgccgccg 41
>ref|XM_507354.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.28 mRNA Length = 1480 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 ccaccccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||||| Sbjct: 17 ccaccacaaaaccctagccgccgccg 42
>ref|XM_506197.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1014_E09.28 mRNA Length = 1486 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 ccaccccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||||| Sbjct: 17 ccaccacaaaaccctagccgccgccg 42
>gb|AY023157.1| Oryza sativa microsatellite MRG5482 containing (GCC)X10, closest to marker L538T7, genomic sequence Length = 230 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 ccaccccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||||| Sbjct: 85 ccaccacaaaaccctagccgccgccg 110
>gb|AC145321.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094P07, complete sequence Length = 162311 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 120 cccaccccaaaaccctagccgccgcc 145 |||||||| ||||||||||||||||| Sbjct: 26035 cccacccccaaaccctagccgccgcc 26010
>emb|AL390879.20| Human DNA sequence from clone RP11-308D16 on chromosome Xq25-27.1 Contains the 3' end of a novel gene, a serine/arginine repetitive matrix 1 (SRRM1) pseudogene (LOC347480), the GPR101 gene for G protein-coupled receptor 101 and four CpG islands, complete sequence Length = 172280 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 111 cccccttcccccaccccaaaac 132 |||||||||||||||||||||| Sbjct: 154761 cccccttcccccaccccaaaac 154782
>gb|AC124784.4| Homo sapiens 12 BAC RP11-461F16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 144000 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 101 tccaccctcgcccccttcccccaccccaaaaccc 134 ||||||| |||| ||| ||||||||||||||||| Sbjct: 132365 tccacccccgccacctccccccaccccaaaaccc 132398
>gb|AC123518.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0088N01, complete sequence Length = 123954 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 120 cccaccccaaaaccctagccgccgcc 145 |||||||| ||||||||||||||||| Sbjct: 78851 cccacccccaaaccctagccgccgcc 78826
>emb|BX571660.1| Wolinella succinogenes, complete genome; segment 4/7 Length = 349926 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 ccacctcctccaccctcgcccc 114 |||||||||||||||||||||| Sbjct: 32264 ccacctcctccaccctcgcccc 32243
>gb|AC107030.3| Homo sapiens 3 BAC RP11-603J22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171343 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 111 cccccttcccccaccccaaaac 132 |||||||||||||||||||||| Sbjct: 45215 cccccttcccccaccccaaaac 45236
>gb|AC009728.14| Homo sapiens 12 BAC RP11-864B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 108793 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 111 cccccttcccccaccccaaaac 132 |||||||||||||||||||||| Sbjct: 85256 cccccttcccccaccccaaaac 85277
>gb|AC093862.3| Homo sapiens BAC clone RP11-549C16 from 4, complete sequence Length = 172195 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 111 cccccttcccccaccccaaaac 132 |||||||||||||||||||||| Sbjct: 108174 cccccttcccccaccccaaaac 108153
>gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 genomic sequence, complete sequence Length = 144724 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 86 gcggcgcccacctcctccaccctcgccccc 115 ||||||||||||| ||||| |||||||||| Sbjct: 100560 gcggcgcccaccttctccagcctcgccccc 100589
>gb|AC017015.4|AC017015 Homo sapiens BAC clone RP11-142L1 from 3, complete sequence Length = 163509 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 111 cccccttcccccaccccaaaac 132 |||||||||||||||||||||| Sbjct: 131678 cccccttcccccaccccaaaac 131699
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 120 cccaccccaaaaccctagccgccgcc 145 |||||||| ||||||||||||||||| Sbjct: 15392036 cccacccccaaaccctagccgccgcc 15392061 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 accccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||| Sbjct: 2386592 acccccaaaccctagccgccgccg 2386615 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 caaaaccctagccgccgccg 146 |||||||||||||||||||| Sbjct: 495694 caaaaccctagccgccgccg 495675
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 120 cccaccccaaaaccctagccgccgcc 145 |||||||| ||||||||||||||||| Sbjct: 5271364 cccacccccaaaccctagccgccgcc 5271389
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 120 cccaccccaaaaccctagccgccgcc 145 |||||||| ||||||||||||||||| Sbjct: 16896543 cccacccccaaaccctagccgccgcc 16896568 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 ccaccccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||||| Sbjct: 4295340 ccaccacaaaaccctagccgccgccg 4295365 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 cccaaaaccctagccgccgcc 145 ||||||||||||||||||||| Sbjct: 21653933 cccaaaaccctagccgccgcc 21653953
>gb|AC093008.10| Homo sapiens 3 BAC RP11-663C11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187889 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 111 cccccttcccccaccccaaaac 132 |||||||||||||||||||||| Sbjct: 25287 cccccttcccccaccccaaaac 25266
>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete sequence Length = 135216 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 86 gcggcgcccacctcctccaccctcgccccc 115 ||||||||||||| ||||| |||||||||| Sbjct: 132268 gcggcgcccaccttctccagcctcgccccc 132239
>dbj|AP004347.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0675B10 Length = 136229 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 120 cccaccccaaaaccctagccgccgcc 145 |||||||| ||||||||||||||||| Sbjct: 72297 cccacccccaaaccctagccgccgcc 72322
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 ccaccccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||||| Sbjct: 116394 ccaccacaaaaccctagccgccgccg 116419
>dbj|AK104504.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F06, full insert sequence Length = 1486 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 ccaccccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||||| Sbjct: 17 ccaccacaaaaccctagccgccgccg 42
>dbj|AK104629.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-C02, full insert sequence Length = 1487 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 ccaccccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||||| Sbjct: 12 ccaccacaaaaccctagccgccgccg 37
>dbj|AK104447.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B12, full insert sequence Length = 1480 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 ccaccccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||||| Sbjct: 17 ccaccacaaaaccctagccgccgccg 42
>dbj|AK060963.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-A09, full insert sequence Length = 1395 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 ccaccccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||||| Sbjct: 16 ccaccacaaaaccctagccgccgccg 41
>dbj|AK060711.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B02, full insert sequence Length = 1641 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 ccaccccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||||| Sbjct: 16 ccaccacaaaaccctagccgccgccg 41
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 120 cccaccccaaaaccctagccgccgcc 145 |||||||| ||||||||||||||||| Sbjct: 5337841 cccacccccaaaccctagccgccgcc 5337866
>emb|AL662972.3|OSJN00173 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063G07, complete sequence Length = 157622 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 120 cccaccccaaaaccctagccgccgcc 145 |||||||| ||||||||||||||||| Sbjct: 80920 cccacccccaaaccctagccgccgcc 80945
>emb|AL731631.2|OSJN00279 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0112E13, complete sequence Length = 133197 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 120 cccaccccaaaaccctagccgccgcc 145 |||||||| ||||||||||||||||| Sbjct: 16103 cccacccccaaaccctagccgccgcc 16128
>emb|AL163152.4|CNS01RID Human chromosome 14 DNA sequence BAC R-98N22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 159772 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 111 cccccttcccccaccccaaaac 132 |||||||||||||||||||||| Sbjct: 9579 cccccttcccccaccccaaaac 9558
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 382 ggaggccttcaagggcgtcaagcag 406 ||||||||||||||||| ||||||| Sbjct: 324865 ggaggccttcaagggcgacaagcag 324841
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 385 ggccttcaagggcgtcaagca 405 ||||||||||||||||||||| Sbjct: 2999344 ggccttcaagggcgtcaagca 2999324
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 ccccttcccccaccccaaaac 132 ||||||||||||||||||||| Sbjct: 1738319 ccccttcccccaccccaaaac 1738339
>ref|XM_567793.1| Cryptococcus neoformans var. neoformans JEC21 phosphogluconate dehydrogenase (decarboxylating) (CNK01050) partial mRNA Length = 1639 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 382 ggaggccttcaagggcgtcaagcag 406 ||||||||||||||||| ||||||| Sbjct: 982 ggaggccttcaagggcgacaagcag 1006
>ref|XM_800183.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509945.20) partial mRNA Length = 1227 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 cgccgggcggtcgccgccatggtcg 245 |||||||||||||||||||| |||| Sbjct: 978 cgccgggcggtcgccgccatcgtcg 1002
>ref|XM_815187.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508277.200) partial mRNA Length = 900 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 cgccgggcggtcgccgccatggtcg 245 |||||||||||||||||||| |||| Sbjct: 648 cgccgggcggtcgccgccatcgtcg 672
>emb|BX284613.3| Human DNA sequence from clone RP5-1092L12 on chromosome 1 Contains the 3' end of a novel gene (FLJ23550) and a novel pseudogene, complete sequence Length = 106576 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 tcgtccatctcatcctccgtc 175 ||||||||||||||||||||| Sbjct: 36196 tcgtccatctcatcctccgtc 36176
>gb|AC046136.12| Homo sapiens 3 BAC RP11-190P13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155827 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 tcgtccatctcatcctccgtc 175 ||||||||||||||||||||| Sbjct: 97357 tcgtccatctcatcctccgtc 97377
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 agacgcggcacccacgatggc 87 ||||||||||||||||||||| Sbjct: 2800725 agacgcggcacccacgatggc 2800745
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 ccaaaaccctagccgccgccg 146 ||||||||||||||||||||| Sbjct: 20461107 ccaaaaccctagccgccgccg 20461127
>gb|AE004649.1| Pseudomonas aeruginosa PAO1, section 210 of 529 of the complete genome Length = 23425 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 250 cccggccaaggtcggcgccgccatg 274 ||||||||||| ||||||||||||| Sbjct: 20575 cccggccaaggccggcgccgccatg 20599
>gb|AC006343.3| Homo sapiens PAC clone RP4-548K24 from 7q34-q36, complete sequence Length = 124877 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 cctcctccaccctcgccccct 116 ||||||||||||||||||||| Sbjct: 18662 cctcctccaccctcgccccct 18682
>dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1123_B08 Length = 134028 Score = 42.1 bits (21), Expect = 1.5 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 118 cccccaccccaaaa-ccctagccgccgcc 145 |||||||||||||| |||||||||||||| Sbjct: 39307 cccccaccccaaaaaccctagccgccgcc 39279
>dbj|AP004064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1520_C09 Length = 145553 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 cccaccccaaaaccctagccgccgc 144 |||||||| |||||||||||||||| Sbjct: 29553 cccacccccaaaccctagccgccgc 29577
>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0456B03 Length = 152973 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 ccaaaaccctagccgccgccg 146 ||||||||||||||||||||| Sbjct: 91737 ccaaaaccctagccgccgccg 91757
>dbj|AK120833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019P07, full insert sequence Length = 1647 Score = 42.1 bits (21), Expect = 1.5 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 118 cccccaccccaaaa-ccctagccgccgcc 145 |||||||||||||| |||||||||||||| Sbjct: 19 cccccaccccaaaaaccctagccgccgcc 47
>ref|XM_566400.1| Anopheles gambiae str. PEST ENSANGP00000027690 (ENSANGG00000003703), partial mRNA Length = 2985 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 ccgggcggtcgccgccatggtcgcg 247 |||| |||||||||||||||||||| Sbjct: 1242 ccggccggtcgccgccatggtcgcg 1266
>ref|XM_311131.2| Anopheles gambiae str. PEST ENSANGP00000004747 (ENSANGG00000003703), partial mRNA Length = 4140 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 ccgggcggtcgccgccatggtcgcg 247 |||| |||||||||||||||||||| Sbjct: 1473 ccggccggtcgccgccatggtcgcg 1497
>gb|AC145183.3| Macropus eugenii clone ME_KBa-60J17, complete sequence Length = 168360 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 ccccttcccccaccccaaaac 132 ||||||||||||||||||||| Sbjct: 24050 ccccttcccccaccccaaaac 24070
>dbj|AP003960.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1612_A04 Length = 124833 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 cccaaaaccctagccgccgcc 145 ||||||||||||||||||||| Sbjct: 84389 cccaaaaccctagccgccgcc 84409
>gb|AC171202.1| Mus musculus BAC clone RP24-288C12 from chromosome 16, complete sequence Length = 194527 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 cccccttcccccaccccaaaa 131 ||||||||||||||||||||| Sbjct: 85712 cccccttcccccaccccaaaa 85692
>emb|AL132988.4|CNS01DTW Human chromosome 14 DNA sequence BAC R-320M16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157962 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 105 ccctcgcccccttcccccaccccaa 129 ||||| ||||||||||||||||||| Sbjct: 133927 ccctcccccccttcccccaccccaa 133903
>ref|XM_467336.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2373 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cttctccccggccgcctcgc 197 |||||||||||||||||||| Sbjct: 118 cttctccccggccgcctcgc 137
>ref|XM_470188.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 912 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 caacctccccggccgcagcagcac 37 |||||||| ||||||||||||||| Sbjct: 237 caacctccgcggccgcagcagcac 260
>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete sequence Length = 906719 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 tcctcgtccatctcatcctc 171 |||||||||||||||||||| Sbjct: 50033 tcctcgtccatctcatcctc 50052
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 tcctcgtccatctcatcctc 171 |||||||||||||||||||| Sbjct: 12959 tcctcgtccatctcatcctc 12940
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 gccgtcttcaacaaggagaa 315 |||||||||||||||||||| Sbjct: 289930 gccgtcttcaacaaggagaa 289949
>gb|AC150515.3| Bos taurus BAC CH240-118E9 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 171213 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ccatctcatcctccgtcgccttct 182 ||||||||||||| |||||||||| Sbjct: 117749 ccatctcatcctctgtcgccttct 117772
>gb|AC150860.4| Bos taurus BAC CH240-424I20 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 165874 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ccatctcatcctccgtcgccttct 182 ||||||||||||| |||||||||| Sbjct: 151024 ccatctcatcctctgtcgccttct 151001
>gb|AC146541.2| Gasterosteus aculeatus clone CH213-33P7, complete sequence Length = 209797 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ccacctcctccaccctcgcc 112 |||||||||||||||||||| Sbjct: 38114 ccacctcctccaccctcgcc 38095
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 accccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||| Sbjct: 3917361 acccctaaaccctagccgccgccg 3917338 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 caacctccccggccgcagcagcac 37 |||||||| ||||||||||||||| Sbjct: 1916956 caacctccgcggccgcagcagcac 1916979
>gb|AC004112.2| Homo sapiens BAC clone CTA-313E3 from 7, complete sequence Length = 155536 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 cccttcccccaccccaaaac 132 |||||||||||||||||||| Sbjct: 78899 cccttcccccaccccaaaac 78918
>ref|XM_849454.1| PREDICTED: Canis familiaris similar to adaptor-related protein complex 3, delta 1 subunit, transcript variant 2 (LOC476750), mRNA Length = 3183 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 90 cgcccacctcctccaccctcgcccccttcccc 121 ||||| ||| ||||||||||||| |||||||| Sbjct: 2620 cgccctccttctccaccctcgcctccttcccc 2589
>ref|XM_567944.1| Cryptococcus neoformans var. neoformans JEC21 1-acylglycerol-3-phosphate O-acyltransferase (CNL03840) partial mRNA Length = 1326 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 tcctcgtccatctcatcctc 171 |||||||||||||||||||| Sbjct: 1184 tcctcgtccatctcatcctc 1165
>ref|XM_570402.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CND00940) partial mRNA Length = 2216 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 gccgtcttcaacaaggagaa 315 |||||||||||||||||||| Sbjct: 481 gccgtcttcaacaaggagaa 500
>ref|XM_572543.1| Cryptococcus neoformans var. neoformans JEC21 1-acylglycerol-3-phosphate O-acyltransferase (CNH03840) partial mRNA Length = 1326 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 tcctcgtccatctcatcctc 171 |||||||||||||||||||| Sbjct: 1184 tcctcgtccatctcatcctc 1165
>gb|AC129187.4| Mus musculus BAC clone RP23-427D4 from chromosome 5, complete sequence Length = 198245 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 101 tccaccctcgcccccttcccccacccca 128 ||||||||||||||| ||||||||||| Sbjct: 155343 tccaccctcgccccccacccccacccca 155370
>gb|AC113299.14| Mus musculus chromosome 5, clone RP23-429P17, complete sequence Length = 214124 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 cacagcagagggcagccctt 54 |||||||||||||||||||| Sbjct: 42914 cacagcagagggcagccctt 42895
>gb|AC159977.4| Mus musculus chromosome 5, clone RP24-121I11, complete sequence Length = 156847 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 cccccttcccccaccccaaaaccc 134 |||||||||||| ||||||||||| Sbjct: 80173 cccccttccccccccccaaaaccc 80150
>emb|AL606526.10| Human DNA sequence from clone RP13-534F18 on chromosome 1, complete sequence Length = 113654 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cccttcccccaccccaaaac 132 |||||||||||||||||||| Sbjct: 111328 cccttcccccaccccaaaac 111309
>emb|AL390741.12| Human DNA sequence from clone RP11-38F19 on chromosome 6 Contains the DSCR1L1 gene for Down syndrome critical region gene 1-like 1 (MCIP2, ZAKI-4) and a novel gene, complete sequence Length = 128461 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ccctcgcccccttcccccacccca 128 ||||| |||||||||||||||||| Sbjct: 15721 ccctcccccccttcccccacccca 15744
>emb|AL034344.24|HS118B18 Human DNA sequence from clone RP1-118B18 on chromosome 6p24.1-25.3 Contains the FOXC1 gene for forkhead box C1 gene, the 3' end of the GMDS gene for GDP-mannose 4 6-dehydratase and four CpG Islands, complete sequence Length = 104729 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 ccaccctcgcccccttcccc 121 |||||||||||||||||||| Sbjct: 75295 ccaccctcgcccccttcccc 75276
>emb|AL035420.15|HS550H1 Human DNA sequence from clone RP4-550H1 on chromosome 20q11.1-11.22 Contains a high mobility group protein pseudogene, three novel genes, the 5' end of the EPB41L1 gene for Erythrocyte membrane protein band 4.1-like 1 protein and three CpG islands, complete sequence Length = 108803 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cccccttcccccaccccaaa 130 |||||||||||||||||||| Sbjct: 13404 cccccttcccccaccccaaa 13423
>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06, complete sequence Length = 122218 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 caacctccccggccgcagcagcac 37 |||||||| ||||||||||||||| Sbjct: 58455 caacctccgcggccgcagcagcac 58432
>emb|AL731635.3|OSJN00277 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016B03, complete sequence Length = 125780 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 accccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||| Sbjct: 111911 acccccaaaccctagccgccgccg 111934
>emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095E20, complete sequence Length = 138572 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 accccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||| Sbjct: 2487 acccccaaaccctagccgccgccg 2510
>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06, complete sequence Length = 143730 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 caaaaccctagccgccgccg 146 |||||||||||||||||||| Sbjct: 26662 caaaaccctagccgccgccg 26643
>gb|AC108709.3| Homo sapiens 3 BAC RP11-81P15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179223 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 105 ccctcgcccccttcccccaccccaaaac 132 ||||| |||||| ||||||||||||||| Sbjct: 110400 ccctccccccctgcccccaccccaaaac 110373
>dbj|AK128409.1| Homo sapiens cDNA FLJ46552 fis, clone THYMU3038759 Length = 3473 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 ccaccctcgcccccttcccc 121 |||||||||||||||||||| Sbjct: 182 ccaccctcgcccccttcccc 201
>gb|AC103596.2| Homo sapiens chromosome 1 clone RP4-669H10, complete sequence Length = 121021 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cccttcccccaccccaaaac 132 |||||||||||||||||||| Sbjct: 24450 cccttcccccaccccaaaac 24431
>gb|AC109486.2| Homo sapiens chromosome 5 clone RP11-546M4, complete sequence Length = 202405 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ccctcgcccccttcccccacccca 128 ||||| |||||||||||||||||| Sbjct: 148494 ccctctcccccttcccccacccca 148517
>gb|AC080006.11| Homo sapiens 3 BAC RP11-789N15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 110483 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ccctcgcccccttcccccacccca 128 ||||| |||||||||||||||||| Sbjct: 100019 ccctcccccccttcccccacccca 100042
>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20, complete sequence Length = 139421 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 cggcgccgccatgccctcgc 281 |||||||||||||||||||| Sbjct: 103666 cggcgccgccatgccctcgc 103685
>dbj|AK023792.1| Homo sapiens cDNA FLJ13730 fis, clone PLACE3000136 Length = 5333 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 ctcctcgtccatctcatcctccgt 174 |||||| ||||||||||||||||| Sbjct: 3250 ctcctcttccatctcatcctccgt 3227
>gb|AC108714.3| Homo sapiens 3p BAC RP11-146G16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 151143 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ccctcgcccccttcccccacccca 128 ||||| |||||||||||||||||| Sbjct: 29330 ccctcccccccttcccccacccca 29307
>gb|AC090349.7| Homo sapiens chromosome 18, clone RP11-844N22, complete sequence Length = 132191 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ccctcgcccccttcccccacccca 128 ||||| |||||||||||||||||| Sbjct: 92096 ccctcccccccttcccccacccca 92119
>ref|XM_934556.1| PREDICTED: Homo sapiens hypothetical protein LOC644799, transcript variant 2 (LOC644799), mRNA Length = 5331 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 cccccttcccccaccccaaa 130 |||||||||||||||||||| Sbjct: 4108 cccccttcccccaccccaaa 4089
>ref|XM_934554.1| PREDICTED: Homo sapiens hypothetical protein LOC644799, transcript variant 1 (LOC644799), mRNA Length = 5271 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 cccccttcccccaccccaaa 130 |||||||||||||||||||| Sbjct: 4048 cccccttcccccaccccaaa 4029
>gb|AC021188.6| Homo sapiens BAC clone RP11-759A7 from 2, complete sequence Length = 236486 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cccttcccccaccccaaaac 132 |||||||||||||||||||| Sbjct: 181282 cccttcccccaccccaaaac 181263
>gb|AC026398.5| Homo sapiens chromosome 5 clone CTB-127M13, complete sequence Length = 88783 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ccctcgcccccttcccccacccca 128 |||||||||||| ||||||||||| Sbjct: 80669 ccctcgccccctccccccacccca 80646
>gb|AF362471.1|AF362471 Triticum aestivum cytokinin dehydrogenase mRNA, partial cds Length = 413 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 cgacttcgacaccgccgtcttcaa 306 ||||||||||| |||||||||||| Sbjct: 45 cgacttcgacagcgccgtcttcaa 68
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 caaaaccctagccgccgccg 146 |||||||||||||||||||| Sbjct: 22037476 caaaaccctagccgccgccg 22037457 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 accccaaaaccctagccgcc 142 |||||||||||||||||||| Sbjct: 19431198 accccaaaaccctagccgcc 19431217 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 caaaaccctagccgccgccg 146 |||||||||||||||||||| Sbjct: 15414842 caaaaccctagccgccgccg 15414823 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 caaaaccctagccgccgccg 146 |||||||||||||||||||| Sbjct: 13779318 caaaaccctagccgccgccg 13779337 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 caaaaccctagccgccgccg 146 |||||||||||||||||||| Sbjct: 11749670 caaaaccctagccgccgccg 11749689
>gb|AC092404.2| Mus musculus strain C57BL6/J chromosome 5 clone RP23-261D18, complete sequence Length = 225503 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 101 tccaccctcgcccccttcccccacccca 128 ||||||||||||||| ||||||||||| Sbjct: 56167 tccaccctcgccccccacccccacccca 56194
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 accccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||| Sbjct: 3917472 acccctaaaccctagccgccgccg 3917449 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 caacctccccggccgcagcagcac 37 |||||||| ||||||||||||||| Sbjct: 1916954 caacctccgcggccgcagcagcac 1916977
>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015N19, complete sequence Length = 168430 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 accccaaaaccctagccgccgccg 146 ||||| |||||||||||||||||| Sbjct: 123834 acccctaaaccctagccgccgccg 123811
>gb|U57899.1|ZMU57899 Zea mays repressor-like protein (in1) gene, complete cds Length = 8291 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gccgccgccggaggctcctc 156 |||||||||||||||||||| Sbjct: 7295 gccgccgccggaggctcctc 7276
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 cttcgacaccgccgtcttcaacaa 309 |||||||| ||||||||||||||| Sbjct: 7357498 cttcgacatcgccgtcttcaacaa 7357521
>gb|AC068448.10| Homo sapiens chromosome 15, clone RP11-624A21, complete sequence Length = 165208 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ccctcgcccccttcccccacccca 128 ||||| |||||||||||||||||| Sbjct: 129231 ccctcccccccttcccccacccca 129208
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 cctcgcccccttcccccacc 125 |||||||||||||||||||| Sbjct: 957014 cctcgcccccttcccccacc 956995
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 tcgccgccatggtcgcggcc 250 |||||||||||||||||||| Sbjct: 6808915 tcgccgccatggtcgcggcc 6808896
>emb|AL935071.4|CNS08CCN Oryza sativa chromosome 12, . BAC OSJNBb0016C24 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 87778 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 caaaaccctagccgccgccg 146 |||||||||||||||||||| Sbjct: 42625 caaaaccctagccgccgccg 42644
>emb|AL713910.2|CNS07YQB Oryza sativa chromosome 12, . BAC OSJNBa0042B03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145118 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 caaaaccctagccgccgccg 146 |||||||||||||||||||| Sbjct: 112919 caaaaccctagccgccgccg 112938
>dbj|BS000075.1| Pan troglodytes chromosome 22 clone:RP43-111A01, map 22, complete sequences Length = 160980 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tcccccaccccaaaacccta 136 |||||||||||||||||||| Sbjct: 29932 tcccccaccccaaaacccta 29913
>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1218_D07 Length = 114511 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cttctccccggccgcctcgc 197 |||||||||||||||||||| Sbjct: 19468 cttctccccggccgcctcgc 19487
>dbj|AP001683.1| Homo sapiens genomic DNA, chromosome 21q, section 27/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tcccccaccccaaaacccta 136 |||||||||||||||||||| Sbjct: 19641 tcccccaccccaaaacccta 19622
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 caaaaccctagccgccgccg 146 |||||||||||||||||||| Sbjct: 21965821 caaaaccctagccgccgccg 21965802 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 accccaaaaccctagccgcc 142 |||||||||||||||||||| Sbjct: 19357425 accccaaaaccctagccgcc 19357444 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 caaaaccctagccgccgccg 146 |||||||||||||||||||| Sbjct: 15369125 caaaaccctagccgccgccg 15369106 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 caaaaccctagccgccgccg 146 |||||||||||||||||||| Sbjct: 13733598 caaaaccctagccgccgccg 13733617 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 caaaaccctagccgccgccg 146 |||||||||||||||||||| Sbjct: 11749341 caaaaccctagccgccgccg 11749360
>emb|AL731757.6|CNS08C86 Oryza sativa chromosome 12, . Partial sequence from BAC OJ1281_G01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 69648 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 caaaaccctagccgccgccg 146 |||||||||||||||||||| Sbjct: 7678 caaaaccctagccgccgccg 7659
>emb|AL713911.3|CNS07YQC Oryza sativa chromosome 12, . BAC OSJNBb0066P16 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 126680 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 caaaaccctagccgccgccg 146 |||||||||||||||||||| Sbjct: 87645 caaaaccctagccgccgccg 87664
>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163490 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 accccaaaaccctagccgcc 142 |||||||||||||||||||| Sbjct: 108892 accccaaaaccctagccgcc 108911
>emb|AL731890.2|CNS08C8U Oryza sativa chromosome 12, . BAC OJ1563_B02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 101314 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 caaaaccctagccgccgccg 146 |||||||||||||||||||| Sbjct: 6996 caaaaccctagccgccgccg 6977
>emb|BX664709.2|CNS09SBZ Oryza sativa chromosome 12, . BAC B1270G11 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155451 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 caaaaccctagccgccgccg 146 |||||||||||||||||||| Sbjct: 94977 caaaaccctagccgccgccg 94996
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 cctcgcccccttcccccacc 125 |||||||||||||||||||| Sbjct: 640990 cctcgcccccttcccccacc 640971
>gb|AC168019.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940127D9, complete sequence Length = 102832 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 cgcggcacccacgatggcggcgcc 93 ||||||||||||||| |||||||| Sbjct: 72347 cgcggcacccacgatcgcggcgcc 72370
>emb|AL109617.2|HS9P14 Homo sapiens chromosome 21 Cosmid LLNLc116P149, complete sequence Length = 36353 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 tcccccaccccaaaacccta 136 |||||||||||||||||||| Sbjct: 6709 tcccccaccccaaaacccta 6728
>emb|AL590994.13| Mouse DNA sequence from clone RP23-382C19 on chromosome 11, complete sequence Length = 207814 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ccctcgcccccttcccccacccca 128 ||||| |||||||||||||||||| Sbjct: 52011 ccctctcccccttcccccacccca 51988
>dbj|AP000472.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B258A5, LL56-APP region, complete sequence Length = 169328 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tcccccaccccaaaacccta 136 |||||||||||||||||||| Sbjct: 13358 tcccccaccccaaaacccta 13339 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,354,908 Number of Sequences: 3902068 Number of extensions: 3354908 Number of successful extensions: 103919 Number of sequences better than 10.0: 152 Number of HSP's better than 10.0 without gapping: 165 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 101140 Number of HSP's gapped (non-prelim): 2773 length of query: 448 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 426 effective length of database: 17,147,199,772 effective search space: 7304707102872 effective search space used: 7304707102872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
