>FLA7_ARATH (Q9SJ81) Fasciclin-like arabinogalactan protein 7 precursor|
          Length = 254

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 23/69 (33%), Positives = 37/69 (53%)
 Frame = +2

Query: 266 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 445
           N+T +L  AG +  F+  + ST        QAN ++ G T+F P D+AF + K   L++L
Sbjct: 46  NLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNL 105

Query: 446 SQQDQVTLV 472
           ++     LV
Sbjct: 106 TKDQLKQLV 114

>FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 precursor|
           (AtAGP8)
          Length = 420

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 27/74 (36%), Positives = 41/74 (55%)
 Frame = +2

Query: 254 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGT 433
           A+  N+T +LEKAG  T F  L+ S+     L    +  + G TVFAP+D AF +     
Sbjct: 185 ASLSNITGLLEKAGCKT-FANLLVSSGV---LKTYESAVEKGLTVFAPSDEAFKAEGVPD 240

Query: 434 LNSLSQQDQVTLVQ 475
           L  L+Q + V+L++
Sbjct: 241 LTKLTQAEVVSLLE 254

>FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 precursor|
          Length = 422

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 26/74 (35%), Positives = 41/74 (55%)
 Frame = +2

Query: 254 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGT 433
           A   N+T +LEKAG  T F  L+ S+     +    +  + G TVFAP+D AF +     
Sbjct: 186 AGVSNITGLLEKAGCKT-FANLLVSSGV---IKTFESTVEKGLTVFAPSDEAFKARGVPD 241

Query: 434 LNSLSQQDQVTLVQ 475
           L +L+Q + V+L++
Sbjct: 242 LTNLTQAEVVSLLE 255

>YH35_SYNP2 (O33752) Hypothetical protein sll1735 homolog|
          Length = 133

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 22/48 (45%), Positives = 28/48 (58%)
 Frame = +2

Query: 308 FIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSLSQ 451
           F  L+A+ Q    +   A E D  FTVFAP D+AF  L PGT+ +L Q
Sbjct: 14  FSTLVAAVQAAGLVETLAGEGD--FTVFAPNDDAFAKLPPGTIQTLVQ 59

>Y1735_SYNY3 (P73392) Hypothetical protein sll1735|
          Length = 133

 Score = 36.6 bits (83), Expect = 0.035
 Identities = 17/29 (58%), Positives = 20/29 (68%)
 Frame = +2

Query: 365 ESDTGFTVFAPTDNAFNSLKPGTLNSLSQ 451
           +S   FTVFAPTD AF  L PGT+ +L Q
Sbjct: 31  QSPGPFTVFAPTDTAFAKLPPGTITTLVQ 59

>Y1483_SYNY3 (P74615) Hypothetical protein sll1483 precursor|
          Length = 180

 Score = 36.6 bits (83), Expect = 0.035
 Identities = 23/64 (35%), Positives = 35/64 (54%)
 Frame = +2

Query: 254 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGT 433
           AA  +   ++E A     F  L+A+ +    + A + E    FTVFAPT++AF +L  GT
Sbjct: 40  AATDSAMTIVEVAAGNETFSTLVAAVKAADLVEALSAEGP--FTVFAPTNDAFAALPAGT 97

Query: 434 LNSL 445
           + SL
Sbjct: 98  VESL 101

>STAB2_RAT (Q8CFM6) Stabilin-2 precursor (Hyaluronan receptor for endocytosis)|
           [Contains: 175 kDa stabilin-2 (175 kDa hyaluronan
           receptor for endocytosis)] (Fragment)
          Length = 1431

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +2

Query: 266 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANES-DTGFTVFAPTDNAFNSLKPGTLNS 442
           N+T V    G YTKF +L+    QD+ L +   +S  T  TVF PTD A  +L P   + 
Sbjct: 607 NLTTVAANHG-YTKFSKLI----QDSGLLSVITDSIHTPVTVFWPTDKALEALPPEQQDF 661

Query: 443 LSQQD 457
           L  QD
Sbjct: 662 LFNQD 666

>BGH3_RABIT (Q95215) Transforming growth factor-beta-induced protein ig-h3|
           precursor (Beta ig-h3) (Kerato-epithelin)
           (RGD-containing collagen-associated protein) (RGD-CAP)
          Length = 683

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +2

Query: 380 FTVFAPTDNAFNSLKPGTLNSL 445
           +TVFAPT+ AF +L PG LN L
Sbjct: 537 YTVFAPTNEAFQALPPGELNKL 558

>STAB2_HUMAN (Q8WWQ8) Stabilin-2 precursor (FEEL-2 protein) (Fasciclin EGF-like|
           laminin-type EGF-like and link domain-containing
           scavenger receptor 1) (FAS1 EGF-like and X-link
           domain-containing adhesion molecule 2) (Hyaluronan
           receptor for endocytosis) [
          Length = 2551

 Score = 33.1 bits (74), Expect = 0.39
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +2

Query: 296 QYTKFIRLMASTQQDTQLNAQANESDTG--FTVFAPTDNAFNSLKPGTLNSL 445
           +Y+KF  L+    ++T L    +E   G  +T+F P + A N++K GTL+ L
Sbjct: 527 RYSKFRSLL----EETNLGHALDEDGVGGPYTIFVPNNEALNNMKDGTLDYL 574

>MP70_MYCTU (P0A668) Immunogenic protein MPT70 precursor|
          Length = 193

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
 Frame = +2

Query: 344 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSL 445
           QLN Q N  DT     +TVFAPT+ AF+ L   T++ L
Sbjct: 80  QLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDEL 117

>MP70_MYCBO (P0A669) Immunogenic protein MPB70 precursor|
          Length = 193

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
 Frame = +2

Query: 344 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSL 445
           QLN Q N  DT     +TVFAPT+ AF+ L   T++ L
Sbjct: 80  QLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDEL 117

>MP70_MYCKA (Q49614) Immunogenic protein MPT70 analog precursor (Fragment)|
          Length = 121

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = +2

Query: 344 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSL 445
           +LN Q N  DT     +TVFAPTD AF+ L   T+  L
Sbjct: 78  RLNPQVNLVDTLNNGQYTVFAPTDPAFDKLPASTIVQL 115

>CROC_DROME (P32027) Fork head domain protein crocodile (FKH protein FD1)|
          Length = 508

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = +1

Query: 298 VHQVHPADGVDAAGHAAERAGQRVGHGLHGVRPHRQRLQQPQAGHPQLALAAGPGDARAG 477
           +H VH A    AA H A++  + V H  H + P  Q      +GH    ++   G A  G
Sbjct: 295 MHHVHHA----AAAHHAQQLQRHVAHVAHPLTPGGQGAGGQSSGHSPTTISTPHGPAHGG 350

>BGH3_MOUSE (P82198) Transforming growth factor-beta-induced protein ig-h3|
           precursor (Beta ig-h3)
          Length = 683

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +2

Query: 263 PNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNS 442
           P +  V++      +F  L+A+ Q    +     E    +TVFAPT+ AF ++ P  LN 
Sbjct: 500 PPMGTVMDVLKGDNRFSMLVAAIQSAGLMEILNREGV--YTVFAPTNEAFQAMPPEELNK 557

Query: 443 L 445
           L
Sbjct: 558 L 558



 Score = 29.3 bits (64), Expect = 5.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 365 ESDTGFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQA 478
           E    FT+FAP++ A++SL    L+SL     + L+ A
Sbjct: 133 EGPGSFTIFAPSNEAWSSLPAEVLDSLVSNVNIELLNA 170



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = +2

Query: 266 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 445
           N+  ++E    +      +A++  +T L     E D  FT+ APT+ AF  +   TLN +
Sbjct: 242 NIQQIIEIEDTFETLRAAVAASGLNTVL-----EGDGQFTLLAPTNEAFEKIPAETLNRI 296

>STAB1_MOUSE (Q8R4Y4) Stabilin-1 precursor (FEEL-1 protein)|
          Length = 2571

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 23/64 (35%), Positives = 29/64 (45%)
 Frame = +2

Query: 266  NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 445
            NVTA  E  G Y  F RL+        L    + S   FT+  PTD+A  +L P   N L
Sbjct: 1728 NVTAAAESFG-YKIFSRLLTVAGLLPMLQ---DASHRPFTMLWPTDSALQALPPDRKNWL 1783

Query: 446  SQQD 457
              +D
Sbjct: 1784 FHED 1787

>HNRPU_HUMAN (Q00839) Heterogenous nuclear ribonucleoprotein U (hnRNP U)|
           (Scaffold attachment factor A) (SAF-A) (p120) (pp120)
          Length = 824

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 17/46 (36%), Positives = 20/46 (43%)
 Frame = +1

Query: 319 DGVDAAGHAAERAGQRVGHGLHGVRPHRQRLQQPQAGHPQLALAAG 456
           +G D  G   E AG   GHG    +P   + QQPQ        AAG
Sbjct: 140 EGEDELGDEEEGAGDENGHGEQQPQPPATQQQQPQQQRGAAKEAAG 185

>MP83_MYCTU (P0A670) Cell surface lipoprotein MPT83 precursor (Lipoprotein p23)|
          Length = 220

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = +2

Query: 344 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSL 445
           +LN   N  DT     +TVFAPT+ AF+ L   T++ L
Sbjct: 106 KLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQL 143

>MP83_MYCBO (P0A671) Cell surface lipoprotein MPB83 precursor (Lipoprotein p23)|
          Length = 220

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = +2

Query: 344 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSL 445
           +LN   N  DT     +TVFAPT+ AF+ L   T++ L
Sbjct: 106 KLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQL 143


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,125,828
Number of Sequences: 219361
Number of extensions: 548738
Number of successful extensions: 1960
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1958
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)