ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast79h03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PME_PRUPE (Q43062) Pectinesterase PPE8B precursor (EC 3.1.1.11) ... 155 5e-38
2PME2_CITSI (O04887) Pectinesterase-2 precursor (EC 3.1.1.11) (Pe... 151 9e-37
3PME2_ARATH (Q42534) Pectinesterase-2 precursor (EC 3.1.1.11) (Pe... 149 4e-36
4PME3_CITSI (P83948) Pectinesterase-3 precursor (EC 3.1.1.11) (Pe... 149 4e-36
5PME1_CITSI (O04886) Pectinesterase-1 precursor (EC 3.1.1.11) (Pe... 145 4e-35
6PME1_FICAW (P83947) Pectinesterase precursor (EC 3.1.1.11) (Pect... 145 5e-35
7PME_DAUCA (P83218) Pectinesterase (EC 3.1.1.11) (Pectin methyles... 143 2e-34
8PME1_LYCES (P14280) Pectinesterase-1 precursor (EC 3.1.1.11) (Pe... 141 9e-34
9PME3_PHAVU (Q43111) Pectinesterase-3 precursor (EC 3.1.1.11) (Pe... 140 1e-33
10PME_PETIN (Q43043) Pectinesterase precursor (EC 3.1.1.11) (Pecti... 139 3e-33
11PME21_LYCES (P09607) Pectinesterase-2 precursor (EC 3.1.1.11) (P... 138 6e-33
12PME1_ARATH (Q43867) Pectinesterase-1 precursor (EC 3.1.1.11) (Pe... 135 4e-32
13PME22_LYCES (Q96575) Pectinesterase-2 precursor (EC 3.1.1.11) (P... 134 8e-32
14PMEU1_LYCES (Q43143) Pectinesterase U1 precursor (EC 3.1.1.11) (... 132 3e-31
15PME3_LYCES (Q96576) Pectinesterase-3 precursor (EC 3.1.1.11) (Pe... 132 4e-31
16PME_MEDSA (Q42920) Pectinesterase precursor (EC 3.1.1.11) (Pecti... 119 4e-27
17PMEL_ARATH (Q5MFV6) Probable pectinesterase VGDH2 precursor (EC ... 106 2e-23
18PME_BRANA (P41510) Probable pectinesterase precursor (EC 3.1.1.1... 104 9e-23
19PME_BRACM (Q42608) Pectinesterase (EC 3.1.1.11) (Pectin methyles... 102 4e-22
20PME4_ARATH (O80722) Pectinesterase-4 precursor (EC 3.1.1.11) (Pe... 100 2e-21
21PME5_ARATH (Q5MFV8) Pectinesterase-5 precursor (EC 3.1.1.11) (Pe... 95 7e-20
22PME_ASPTU (P17872) Pectinesterase precursor (EC 3.1.1.11) (Pecti... 58 1e-08
23PME_ASPAC (Q12535) Pectinesterase precursor (EC 3.1.1.11) (Pecti... 51 2e-06
24PMEA_ERWCH (P0C1A8) Pectinesterase A precursor (EC 3.1.1.11) (Pe... 50 2e-06
25PMEA_DICD3 (P0C1A9) Pectinesterase A precursor (EC 3.1.1.11) (Pe... 50 2e-06
26PME2_RALSO (P24791) Pectinesterase precursor (EC 3.1.1.11) (Pect... 42 7e-04
27PME1_RALSO (P58601) Pectinesterase precursor (EC 3.1.1.11) (Pect... 41 0.002
28PTW3C_ECOLI (P09323) PTS system N-acetylglucosamine-specific EII... 30 3.8
29CISH_HUMAN (Q9NSE2) Cytokine-inducible SH2-containing protein (C... 30 3.8
30IF2_CAUCR (Q9AC25) Translation initiation factor IF-2 29 6.6
31PALB_NEUCR (Q7RZP7) Calpain-like protease palB/rim-13 (EC 3.4.22... 28 8.6
32RHO_MICLU (P52154) Transcription termination factor rho (EC 3.6.... 28 8.6

>PME_PRUPE (Q43062) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 522

 Score =  155 bits (392), Expect = 5e-38
 Identities = 72/149 (48%), Positives = 97/149 (65%)
 Frame = +2

Query: 2   ITGSRSAADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCA 181
           I+G+RS  DGWTTFR+AT  VSG GF+ARD+ F NTAG  + QAVALR ++D++  YRC 
Sbjct: 271 ISGNRSFVDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVFYRCN 330

Query: 182 VDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQSR 361
           + G+QD LY H+ RQFYR+C +SGTVD  FG+               +P Q N +TAQ R
Sbjct: 331 IRGYQDTLYTHTMRQFYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGR 390

Query: 362 ADPNQDTGFAVHNCTVEASPELLAGGVST 448
            DPN+ TG ++  C + A  +L A  V++
Sbjct: 391 KDPNEPTGISIQFCNITADSDLEAASVNS 419



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>PME2_CITSI (O04887) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 510

 Score =  151 bits (381), Expect = 9e-37
 Identities = 76/151 (50%), Positives = 95/151 (62%)
 Frame = +2

Query: 2   ITGSRSAADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCA 181
           ITGS+S   G TTF++ATV V G+ F+ARD+  RNTAG    QAVALR  +D++  YRC+
Sbjct: 263 ITGSKSVGGGATTFKSATVAVVGDNFIARDITIRNTAGPNNHQAVALRSGSDLSVFYRCS 322

Query: 182 VDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQSR 361
            +G+QD LY HS RQFYREC + GTVD  FGN              P P ++N LTAQ R
Sbjct: 323 FEGYQDTLYVHSQRQFYRECDIYGTVDFIFGNAAVVLQNCNIFARKP-PNRTNTLTAQGR 381

Query: 362 ADPNQDTGFAVHNCTVEASPELLAGGVSTRT 454
            DPNQ TG  +HNC V A+ +L     S +T
Sbjct: 382 TDPNQSTGIIIHNCRVTAASDLKPVQSSVKT 412



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>PME2_ARATH (Q42534) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 2) (PE 2)
          Length = 587

 Score =  149 bits (375), Expect = 4e-36
 Identities = 72/144 (50%), Positives = 95/144 (65%)
 Frame = +2

Query: 2   ITGSRSAADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCA 181
           ITGSR+  DG TTF +ATV   GE FLARD+ F+NTAG ++ QAVALRV +D +A Y+C 
Sbjct: 339 ITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCD 398

Query: 182 VDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQSR 361
           +  +QD LY HS RQF+ +C ++GTVD  FGN              P  GQ N++TAQ R
Sbjct: 399 MFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNAAAVLQDCDINARRPNSGQKNMVTAQGR 458

Query: 362 ADPNQDTGFAVHNCTVEASPELLA 433
           +DPNQ+TG  + NC +  + +LLA
Sbjct: 459 SDPNQNTGIVIQNCRIGGTSDLLA 482



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>PME3_CITSI (P83948) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 3) (PE 3)
          Length = 584

 Score =  149 bits (375), Expect = 4e-36
 Identities = 73/142 (51%), Positives = 94/142 (66%)
 Frame = +2

Query: 2   ITGSRSAADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCA 181
           ITGSR+  DG TTF++ATV V GEGFLARD+ F+NTAG ++ QAVALRV AD++A Y C 
Sbjct: 336 ITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCD 395

Query: 182 VDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQSR 361
           +  +QD LY HS RQF+  C ++GTVD  FGN              P  GQ N++TAQ R
Sbjct: 396 MLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGR 455

Query: 362 ADPNQDTGFAVHNCTVEASPEL 427
           ADPNQ+TG  +    + A+ +L
Sbjct: 456 ADPNQNTGIVIQKSRIGATSDL 477



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>PME1_CITSI (O04886) Pectinesterase-1 precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 584

 Score =  145 bits (367), Expect = 4e-35
 Identities = 71/142 (50%), Positives = 92/142 (64%)
 Frame = +2

Query: 2   ITGSRSAADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCA 181
           ITGSR+  DG TTF++AT  V GEGFLARD+ F+NTAG ++ QAVALRV AD++A Y C 
Sbjct: 336 ITGSRNVVDGSTTFKSATAAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCD 395

Query: 182 VDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQSR 361
           +  +QD LY HS RQF+  C ++GTVD  FGN              P  GQ N++TAQ R
Sbjct: 396 MLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGR 455

Query: 362 ADPNQDTGFAVHNCTVEASPEL 427
            DPNQ+TG  +    + A+ +L
Sbjct: 456 TDPNQNTGIVIQKSRIGATSDL 477



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>PME1_FICAW (P83947) Pectinesterase precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 545

 Score =  145 bits (366), Expect = 5e-35
 Identities = 69/142 (48%), Positives = 92/142 (64%)
 Frame = +2

Query: 2   ITGSRSAADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCA 181
           ITGSR+  DG TTF +ATV   G+GF+A+D+ F+NTAG  + QAVALR+ AD     RC 
Sbjct: 295 ITGSRNVVDGSTTFDSATVAAVGDGFIAQDICFQNTAGPEKYQAVALRIGADETVINRCR 354

Query: 182 VDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQSR 361
           +D +QD LY H++RQFYR+  ++GTVD  FGN               + GQ N +TAQ R
Sbjct: 355 IDAYQDTLYPHNYRQFYRDRNITGTVDFIFGNAAVVFQNCNLIPRKQMKGQENTITAQGR 414

Query: 362 ADPNQDTGFAVHNCTVEASPEL 427
            DPNQ+TG ++ NC + AS +L
Sbjct: 415 TDPNQNTGTSIQNCEIFASADL 436



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>PME_DAUCA (P83218) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE)|
          Length = 319

 Score =  143 bits (360), Expect = 2e-34
 Identities = 70/142 (49%), Positives = 92/142 (64%)
 Frame = +2

Query: 2   ITGSRSAADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCA 181
           IT S++  DG TTF +ATV   G GFLARD+ F+NTAGAA+ QAVALRV +D++A YRC 
Sbjct: 71  ITASKNVQDGSTTFNSATVAAVGAGFLARDITFQNTAGAAKHQAVALRVGSDLSAFYRCD 130

Query: 182 VDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQSR 361
           +  +QD+LY HS RQF+  C ++GTVD  FGN              P  GQ N++TAQ R
Sbjct: 131 ILAYQDSLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGR 190

Query: 362 ADPNQDTGFAVHNCTVEASPEL 427
            DPNQ+TG  +    + A+ +L
Sbjct: 191 TDPNQNTGIVIQKSRIGATSDL 212



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>PME1_LYCES (P14280) Pectinesterase-1 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 1) (PE 1)
          Length = 546

 Score =  141 bits (355), Expect = 9e-34
 Identities = 70/142 (49%), Positives = 91/142 (64%)
 Frame = +2

Query: 2   ITGSRSAADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCA 181
           ITGS +  DG TTFR+AT+   G+GF+ +D+  +NTAG A+ QAVALRV ADM+   RC 
Sbjct: 296 ITGSLNVVDGSTTFRSATLAAVGQGFILQDICIQNTAGPAKDQAVALRVGADMSVINRCR 355

Query: 182 VDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQSR 361
           +D +QD LYAHS RQFYR+  ++GTVD  FGN              P   Q N++TAQ R
Sbjct: 356 IDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGR 415

Query: 362 ADPNQDTGFAVHNCTVEASPEL 427
            DPNQ TG ++  C + AS +L
Sbjct: 416 TDPNQATGTSIQFCNIIASSDL 437



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>PME3_PHAVU (Q43111) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 3) (PE 3)
          Length = 581

 Score =  140 bits (354), Expect = 1e-33
 Identities = 65/136 (47%), Positives = 87/136 (63%)
 Frame = +2

Query: 2   ITGSRSAADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCA 181
           + GSR+  DG  TF TAT  V G+GF+A+D+ F N AGA++ QAVALR  +D +  +RC+
Sbjct: 336 VVGSRNFMDGTPTFETATFAVKGKGFIAKDIGFVNNAGASKHQAVALRSGSDRSVFFRCS 395

Query: 182 VDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQSR 361
            DG QD LYAHS RQFYR+C ++GT+D  FGN              P+P Q N +TAQ +
Sbjct: 396 FDGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQSCKIMPRQPLPNQFNTITAQGK 455

Query: 362 ADPNQDTGFAVHNCTV 409
            DPNQ+TG  +   T+
Sbjct: 456 KDPNQNTGIIIQKSTI 471



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>PME_PETIN (Q43043) Pectinesterase precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 374

 Score =  139 bits (351), Expect = 3e-33
 Identities = 66/151 (43%), Positives = 93/151 (61%)
 Frame = +2

Query: 2   ITGSRSAADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCA 181
           ITG++S  DG +TF T TVGV+G  F+A+++ F NTAG  + QAVALRV+AD A  Y C 
Sbjct: 121 ITGNKSVKDGPSTFHTTTVGVNGANFVAKNIGFENTAGPEKEQAVALRVSADKAIIYNCQ 180

Query: 182 VDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQSR 361
           +DG+QD LY H++RQFYR+CT++GTVD  FGN              P   QS ++TAQ R
Sbjct: 181 IDGYQDTLYVHTYRQFYRDCTITGTVDFIFGNGEAVLQNCKVIVRKPAQNQSCMVTAQGR 240

Query: 362 ADPNQDTGFAVHNCTVEASPELLAGGVSTRT 454
            +P Q     + NC ++   +  +    ++T
Sbjct: 241 TEPIQKGAIVLQNCEIKPDTDYFSLSPPSKT 271



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>PME21_LYCES (P09607) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 2) (PE 2)
          Length = 550

 Score =  138 bits (348), Expect = 6e-33
 Identities = 68/142 (47%), Positives = 90/142 (63%)
 Frame = +2

Query: 2   ITGSRSAADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCA 181
           ITGS +  DG TTF +AT+   G+GF+ +D+  +NTAG A+ QAVALRV AD +   RC 
Sbjct: 300 ITGSLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQAVALRVGADKSVINRCR 359

Query: 182 VDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQSR 361
           +D +QD LYAHS RQFYR+  ++GT+D  FGN              P   Q N++TAQ R
Sbjct: 360 IDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGR 419

Query: 362 ADPNQDTGFAVHNCTVEASPEL 427
            DPNQ TG ++  C + ASP+L
Sbjct: 420 TDPNQATGTSIQFCDIIASPDL 441



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>PME1_ARATH (Q43867) Pectinesterase-1 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 1) (PE 1)
          Length = 586

 Score =  135 bits (341), Expect = 4e-32
 Identities = 61/144 (42%), Positives = 90/144 (62%)
 Frame = +2

Query: 2   ITGSRSAADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCA 181
           I+GS++  DG  T+ TAT  + G+GF+ +D+   NTAGAA+ QAVA R  +D +  Y+C+
Sbjct: 343 ISGSKNFVDGTPTYETATFAIQGKGFIMKDIGIINTAGAAKHQAVAFRSGSDFSVYYQCS 402

Query: 182 VDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQSR 361
            DG QD LY HS RQFYR+C ++GT+D  FG+              P+  Q N +TAQ +
Sbjct: 403 FDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGK 462

Query: 362 ADPNQDTGFAVHNCTVEASPELLA 433
            DPNQ +G ++  CT+ A+  ++A
Sbjct: 463 KDPNQSSGMSIQRCTISANGNVIA 486



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>PME22_LYCES (Q96575) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 2) (PE 2)
          Length = 550

 Score =  134 bits (338), Expect = 8e-32
 Identities = 66/142 (46%), Positives = 89/142 (62%)
 Frame = +2

Query: 2   ITGSRSAADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCA 181
           ITG+ +  DG TTF +AT+   G+GF+ +D+  +NTAG A+ QAVALRV AD +   RC 
Sbjct: 300 ITGNLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQAVALRVGADKSVINRCR 359

Query: 182 VDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQSR 361
           +D +QD LYAHS RQFYR+  ++GT+D  FGN              P   Q N++TAQ R
Sbjct: 360 IDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCKLVARKPGKYQQNMVTAQGR 419

Query: 362 ADPNQDTGFAVHNCTVEASPEL 427
            DPNQ TG ++  C + AS +L
Sbjct: 420 TDPNQATGTSIQFCNIIASSDL 441



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>PMEU1_LYCES (Q43143) Pectinesterase U1 precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 583

 Score =  132 bits (333), Expect = 3e-31
 Identities = 67/142 (47%), Positives = 89/142 (62%)
 Frame = +2

Query: 2   ITGSRSAADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCA 181
           IT SR+  DG TTF +ATV       LARD+ F+NTAGA++ QAVAL V +D++A YRC 
Sbjct: 335 ITASRNVQDGSTTFHSATVVRVAGKVLARDITFQNTAGASKHQAVALCVGSDLSAFYRCD 394

Query: 182 VDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQSR 361
           +  +QD LY HS RQF+ +C ++GTVD  FGN              P  GQ N++TAQ R
Sbjct: 395 MLAYQDTLYVHSNRQFFVQCLVAGTVDFIFGNGAAVFQDCDIHARRPGSGQKNMVTAQGR 454

Query: 362 ADPNQDTGFAVHNCTVEASPEL 427
            DPNQ+TG  +  C + A+ +L
Sbjct: 455 TDPNQNTGIVIQKCRIGATSDL 476



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>PME3_LYCES (Q96576) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 3) (PE 3)
          Length = 544

 Score =  132 bits (332), Expect = 4e-31
 Identities = 67/142 (47%), Positives = 89/142 (62%)
 Frame = +2

Query: 2   ITGSRSAADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCA 181
           ITGS +  DG +TF + T+   G+GF+ +D+  +NTAG  + QAVALRV ADM+   RC 
Sbjct: 295 ITGSLNVVDG-STFPSNTLAAVGQGFILQDICIQNTAGPEKDQAVALRVGADMSVINRCR 353

Query: 182 VDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQSR 361
           +D +QD LYAHS RQFYR+  ++GTVD  FGN              P   Q N++TAQ R
Sbjct: 354 IDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQIVARKPNKRQKNMVTAQGR 413

Query: 362 ADPNQDTGFAVHNCTVEASPEL 427
            DPNQ TG ++  C + ASP+L
Sbjct: 414 TDPNQATGTSIQFCDIIASPDL 435



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>PME_MEDSA (Q42920) Pectinesterase precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE) (P65)
          Length = 447

 Score =  119 bits (298), Expect = 4e-27
 Identities = 61/141 (43%), Positives = 77/141 (54%)
 Frame = +2

Query: 5   TGSRSAADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCAV 184
           TGS + ADG  T+ TAT GV+G  F+A+D+ F NTAG  + QAVALRV AD A  Y C +
Sbjct: 195 TGSLNYADGINTYNTATFGVNGANFMAKDIGFENTAGTGKHQAVALRVTADQAIFYNCQM 254

Query: 185 DGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQSRA 364
           DG QD LY  S RQFYR+C++SGT+D  FG               P  GQ  ++TA  R 
Sbjct: 255 DGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGRE 314

Query: 365 DPNQDTGFAVHNCTVEASPEL 427
             N  +     +      P L
Sbjct: 315 KQNSASALVFQSSHFTGEPAL 335



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>PMEL_ARATH (Q5MFV6) Probable pectinesterase VGDH2 precursor (EC 3.1.1.11)|
           (Pectin methylesterase) (PE) (VANGUARD1-like protein 2)
           (VGD1-like protein 2)
          Length = 588

 Score =  106 bits (265), Expect = 2e-23
 Identities = 62/154 (40%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
 Frame = +2

Query: 2   ITGSRSA--ADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYR 175
           IT  RS   + G TT  + TV V  EGF+A+ + F+NTAG    QAVALRVN D A  + 
Sbjct: 339 ITFDRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPLGHQAVALRVNGDRAVIFN 398

Query: 176 CAVDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQ 355
           C  DG+QD LY ++ RQFYR   +SGTVD  FG                 PGQSN +TA 
Sbjct: 399 CRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILVRKGSPGQSNYVTAD 458

Query: 356 -SRADPNQDTGFAVHNCTVEASPELLAGGVSTRT 454
            +        G  +HNC +    EL A  ++ ++
Sbjct: 459 GNEKGAAMKIGIVLHNCRIIPDKELEADKLTIKS 492



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>PME_BRANA (P41510) Probable pectinesterase precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 584

 Score =  104 bits (260), Expect = 9e-23
 Identities = 61/154 (39%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
 Frame = +2

Query: 2   ITGSRSA--ADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYR 175
           IT  RS   + G TT  + TV V  EGF+A+ + F+NTAG    QAVA RVN D A  + 
Sbjct: 335 ITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGHQAVAFRVNGDRAVIFN 394

Query: 176 CAVDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQ 355
           C  DG+QD LY ++ RQFYR   +SGTVD  FG                 PGQ+N +TA 
Sbjct: 395 CRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTAD 454

Query: 356 SRADPNQ-DTGFAVHNCTVEASPELLAGGVSTRT 454
                     G  +HNC + A  EL A  ++ ++
Sbjct: 455 GNEKGKAVKIGIVLHNCRIMADKELEADRLTVKS 488



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>PME_BRACM (Q42608) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE)|
           (Fragment)
          Length = 571

 Score =  102 bits (255), Expect = 4e-22
 Identities = 60/154 (38%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
 Frame = +2

Query: 2   ITGSRSA--ADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYR 175
           IT  RS   + G TT  + TV V  EGF+A+ + F+NTAG    QAVA RVN D A  + 
Sbjct: 322 ITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGNQAVAFRVNGDRAVIFN 381

Query: 176 CAVDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQ 355
           C  DG+QD LY ++ RQFYR   +SGTVD   G                 PGQ+N +TA 
Sbjct: 382 CRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTAD 441

Query: 356 SRADPNQ-DTGFAVHNCTVEASPELLAGGVSTRT 454
            +        G  +HNC + A  EL A  ++ ++
Sbjct: 442 GKQKGKAVKIGIVLHNCRIMADKELEADRLTVKS 475



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>PME4_ARATH (O80722) Pectinesterase-4 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 4) (PE 4) (VANGUARD1-like protein 1)
           (VGD1-like protein 1) (AtPME4)
          Length = 588

 Score =  100 bits (249), Expect = 2e-21
 Identities = 57/139 (41%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
 Frame = +2

Query: 2   ITGSRSAA--DGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYR 175
           I+ +RS A   G TT  +ATV V  EGF+A+ M F+NTAG    QA A+RVN D A  + 
Sbjct: 339 ISYNRSVALSRGTTTSLSATVQVESEGFMAKWMGFKNTAGPMGHQAAAIRVNGDRAVIFN 398

Query: 176 CAVDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQ 355
           C  DG+QD LY ++ RQFYR C +SGTVD  FG                  GQ N +TA 
Sbjct: 399 CRFDGYQDTLYVNNGRQFYRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTAD 458

Query: 356 -SRADPNQDTGFAVHNCTV 409
            +        G  + NC +
Sbjct: 459 GNELGLGMKIGIVLQNCRI 477



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>PME5_ARATH (Q5MFV8) Pectinesterase-5 precursor (EC 3.1.1.11) (Pectin|
           methylesterase 5) (PE 5) (VANGUARD 1 protein)
          Length = 595

 Score = 95.1 bits (235), Expect = 7e-20
 Identities = 53/136 (38%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
 Frame = +2

Query: 29  GWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCAVDGHQDALY 208
           G TT  + TV V  EGF+A+ + F+NTAG    QAVA+RVN D A  + C  DG+QD LY
Sbjct: 357 GTTTSLSGTVQVESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLY 416

Query: 209 AHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQ-SRADPNQDTG 385
            ++ RQFYR   +SGTVD  FG                  GQ N +TA  +        G
Sbjct: 417 VNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLIVVRKGNKGQFNTVTADGNEKGLAMKIG 476

Query: 386 FAVHNCTVEASPELLA 433
             + NC +    +L A
Sbjct: 477 IVLQNCRIVPDKKLAA 492



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>PME_ASPTU (P17872) Pectinesterase precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 331

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 40/139 (28%), Positives = 59/139 (42%)
 Frame = +2

Query: 2   ITGSRSAADGWTTFRTATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCA 181
           IT + + AD      TAT+    EG    ++   NT G A  QA+A+   A     Y C 
Sbjct: 96  ITHAIALADVDNDDETATLRNYAEGSAIYNLNIANTCGQACHQALAVSAYASEQGYYACQ 155

Query: 182 VDGHQDALYAHSFRQFYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQSR 361
             G+QD L A +  Q Y    + G VD  FG                 P  +++ TA  R
Sbjct: 156 FTGYQDTLLAETGYQVYAGTYIEGAVDFIFGQHARAWFHECDIRVLEGPSSASI-TANGR 214

Query: 362 ADPNQDTGFAVHNCTVEAS 418
           +  + D+ + +H  TV A+
Sbjct: 215 SSESDDSYYVIHKSTVAAA 233



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>PME_ASPAC (Q12535) Pectinesterase precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 331

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 35/123 (28%), Positives = 49/123 (39%)
 Frame = +2

Query: 47  TATVGVSGEGFLARDMAFRNTAGAARGQAVALRVNADMAAAYRCAVDGHQDALYAHSFRQ 226
           TAT      G    ++   NT G A  QA+AL   AD    Y C   G+QD L A +  Q
Sbjct: 112 TATFRNKAVGSQVYNLNIANTCGQACHQALALSAWADQQGYYGCNFTGYQDTLLAQTGNQ 171

Query: 227 FYRECTLSGTVDLAFGNXXXXXXXXXXXXXXPVPGQSNVLTAQSRADPNQDTGFAVHNCT 406
            Y    + G VD  FG                 P  +++ TA  R+     + + ++  T
Sbjct: 172 LYINSYIEGAVDFIFGQHARAWFQNVDIRVVEGPTSASI-TANGRSSETDTSYYVINKST 230

Query: 407 VEA 415
           V A
Sbjct: 231 VAA 233



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>PMEA_ERWCH (P0C1A8) Pectinesterase A precursor (EC 3.1.1.11) (Pectin|
           methylesterase A) (PE A)
          Length = 366

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
 Frame = +2

Query: 14  RSAADGWTTFRTATVGVSGEGFLARDMAFRNT----AGAARG----------QAVALRVN 151
           +S    W T  ++T+ +S + F A+ +  RN     A  A+           QAVAL V 
Sbjct: 101 KSDGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVT 160

Query: 152 ADMAAAYRCAVD--GHQDALYAHSFRQFYRECTLSGTVDLAFGN 277
                AY   V   G+QD LY    R F+ +C +SGTVD  FG+
Sbjct: 161 KSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGD 204



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>PMEA_DICD3 (P0C1A9) Pectinesterase A precursor (EC 3.1.1.11) (Pectin|
           methylesterase A) (PE A)
          Length = 366

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
 Frame = +2

Query: 14  RSAADGWTTFRTATVGVSGEGFLARDMAFRNT----AGAARG----------QAVALRVN 151
           +S    W T  ++T+ +S + F A+ +  RN     A  A+           QAVAL V 
Sbjct: 101 KSDGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVT 160

Query: 152 ADMAAAYRCAVD--GHQDALYAHSFRQFYRECTLSGTVDLAFGN 277
                AY   V   G+QD LY    R F+ +C +SGTVD  FG+
Sbjct: 161 KSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGD 204



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>PME2_RALSO (P24791) Pectinesterase precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 396

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
 Frame = +2

Query: 38  TFRTATVGVSGEGFLARDMAFRN-----TAGAARGQAVALRVNADMAAAYRCAVDGHQDA 202
           T R+AT  V    F AR++ F+N     T       AVAL V  D A     +V G+QD 
Sbjct: 174 TVRSATAMVRASNFNARNLTFKNSYVEGTFADNNQSAVALAVRGDKAILENVSVIGNQDT 233

Query: 203 LYAHS------FRQFYRECTLSGTVDLAFG 274
           LY  +       R +++   + G  D  FG
Sbjct: 234 LYLGATNNTMVIRAYFKNSFIQGDTDFIFG 263



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>PME1_RALSO (P58601) Pectinesterase precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 396

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
 Frame = +2

Query: 38  TFRTATVGVSGEGFLARDMAFRN-----TAGAARGQAVALRVNADMAAAYRCAVDGHQDA 202
           T R+AT  V    F AR++ F+N     T       AVAL V  D A     +V G+QD 
Sbjct: 174 TLRSATAMVRASDFHARNLTFKNSYVEGTYADNNQSAVALAVRGDKAILENVSVIGNQDT 233

Query: 203 LYAHS------FRQFYRECTLSGTVDLAFG 274
           L+  +       R +++   + G  D  FG
Sbjct: 234 LFVGATSTTTVIRAYFKNSFIQGDTDFIFG 263



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>PTW3C_ECOLI (P09323) PTS system N-acetylglucosamine-specific EIICBA component|
           (EIICBA-Nag) (EII-Nag) [Includes: N-acetylglucosamine
           permease IIC component (PTS system
           N-acetylglucosamine-specific EIIC component);
           N-acetylglucosamine-specific phosphotrans
          Length = 648

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 20/48 (41%), Positives = 23/48 (47%)
 Frame = -1

Query: 165 AAMSAFTRSATACPLAAPAVLRNAMSRARNPSPDTPTVAVRKVVQPSA 22
           AA SA    ATA P+A P  + NA+S A   SP T  V     V   A
Sbjct: 472 AAASAEATPATAAPVAKPQAVPNAVSIAELVSPITGDVVALDQVPDEA 519



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>CISH_HUMAN (Q9NSE2) Cytokine-inducible SH2-containing protein (CIS) (CIS-1)|
           (Suppressor of cytokine signaling) (SOCS) (Protein G18)
          Length = 258

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = -1

Query: 186 STAQRYAAAMSAFTRSATACPLAAPAV---LRNAMSRARNPSPDTPTVAVRKVVQP 28
           S  Q Y A+ +A TRS +  P   PA+     +A S    P+P   T    K+VQP
Sbjct: 158 SLVQHYVASCTADTRSDSPDPAPTPALPMPKEDAPSDPALPAPPPATAVHLKLVQP 213



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>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2|
          Length = 1009

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 23/58 (39%), Positives = 26/58 (44%)
 Frame = -1

Query: 180 AQRYAAAMSAFTRSATACPLAAPAVLRNAMSRARNPSPDTPTVAVRKVVQPSAALRLP 7
           AQR AAA +A  R+A A P  A A    A +    P P  P  A R V Q   A   P
Sbjct: 131 AQREAAAKAAAERAAAAPPPVAQAPAAPAPAAPVTPPPAAPQ-APRPVAQAPVAPSAP 187



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>PALB_NEUCR (Q7RZP7) Calpain-like protease palB/rim-13 (EC 3.4.22.-) (Cysteine|
           protease rim-13)
          Length = 986

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = -1

Query: 201 ASWWPSTAQRYAAAMSAFTRSATACPLAAPAVLRNAMSRARNPSPDTPT 55
           +++ P    RY+  +SA      ACP     +L +A  R R P+P   T
Sbjct: 757 STYEPGQTGRYSLRVSA------ACPFTIEPILSDAAGRLRTPAPSPAT 799



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>RHO_MICLU (P52154) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 690

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 20/56 (35%), Positives = 25/56 (44%)
 Frame = -1

Query: 180 AQRYAAAMSAFTRSATACPLAAPAVLRNAMSRARNPSPDTPTVAVRKVVQPSAALR 13
           AQ  AA  +    +A +   AAPA  R A  R+R    DT   A  +  QP A  R
Sbjct: 66  AQAPAAPAAETAPAAASSEDAAPAAERPARRRSRRADADTSAPAAAQDGQPQAEAR 121


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,004,067
Number of Sequences: 219361
Number of extensions: 472227
Number of successful extensions: 1869
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1864
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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