>SGS3_DROME (P02840) Salivary glue protein Sgs-3 precursor|
          Length = 307

 Score = 34.7 bits (78), Expect = 0.094
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = +3

Query: 21  QLQLKAPSTTPLT--QTASQAKCVTPTSSRPASLRSTAAR-SCSRPAT 155
           Q   + P TTP T  QT +Q  C TPT+++P + + T  + + ++P T
Sbjct: 118 QTTTQLPCTTPTTTKQTTTQLPCTTPTTTKPTTTKPTTTKPTTTKPTT 165



 Score = 30.0 bits (66), Expect = 2.3
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
 Frame = +3

Query: 6   SPHISQLQLKAPSTT--PLT--QTASQAKCVTPTSSRPASLRSTAARSCSRPAT 155
           +P   Q   + P TT  P T  QT +Q  C TPT+++  + + T  ++ +  AT
Sbjct: 56  APPTQQSTTQPPCTTSKPTTPKQTTTQLPCTTPTTTKATTTKPTTTKATTTKAT 109



 Score = 29.3 bits (64), Expect = 3.9
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +3

Query: 33  KAPSTTPLT--QTASQAKCVTPTSSRPASLRSTAARSCSRPAT 155
           KA +T P T  QT +Q  C TPT+++    ++T    C+ P T
Sbjct: 107 KATTTKPTTTKQTTTQLPCTTPTTTK----QTTTQLPCTTPTT 145

>SDC_DROME (P49415) Syndecan precursor|
          Length = 399

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 42  STTPLTQTASQAKCVTPTSSRPASLRSTAARSCS 143
           ST P T T++     TPT++ PAS  + AA   S
Sbjct: 123 STIPTTSTSTPMPTTTPTATTPASTTTAAATQIS 156

>GYRB_MYXXA (O33367) DNA gyrase subunit B (EC 5.99.1.3)|
          Length = 815

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +3

Query: 33  KAPSTTPLTQTASQAKCVTPTSSRPASLRSTAARSCSRPAT 155
           + PSTTP      ++ C TPT   P   R +   SC R +T
Sbjct: 664 RTPSTTP------RSWCSTPTRMEPCGRRCSTTPSCRRRST 698

>UBQL2_MOUSE (Q9QZM0) Ubiquilin-2 (Protein linking IAP with cytoskeleton 2)|
           (PLIC-2) (Ubiquitin-like product Chap1/Dsk2) (DSK2
           homolog) (Chap1)
          Length = 638

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +3

Query: 39  PSTTPLTQTASQAKCVTPTSSRPASLRSTAARSCSRPAT 155
           PSTT  T T +     T T++ PA+  S+A RS S P T
Sbjct: 116 PSTTAGTSTTTTT---TTTAAAPAATTSSAPRSSSTPTT 151

>GAB1_MOUSE (Q9QYY0) GRB2-associated-binding protein 1 (GRB2-associated binder|
           1)
          Length = 695

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 27  QLKAPSTTPLTQTASQAKCVTPTSSRPASLRSTAARSCS 143
           +L+AP  +P+T++ ++     P S RP S+ ST + S S
Sbjct: 545 ELQAPVRSPITRSFARDSSRFPMSPRPDSVHSTTSSSDS 583

>GAB1_MESAU (Q99PF6) GRB2-associated-binding protein 1 (GRB2-associated binder|
           1)
          Length = 694

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 27  QLKAPSTTPLTQTASQAKCVTPTSSRPASLRSTAARSCS 143
           +L+AP  +P+T++ ++     P S RP S+ ST + S S
Sbjct: 544 ELQAPVRSPITRSFARDSSRFPLSPRPNSVHSTTSSSDS 582

>GAB1_HUMAN (Q13480) GRB2-associated-binding protein 1 (GRB2-associated binder|
           1)
          Length = 694

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 27  QLKAPSTTPLTQTASQAKCVTPTSSRPASLRSTAARSCS 143
           +L+AP  +P+T++ ++     P S RP S+ ST + S S
Sbjct: 544 ELQAPVRSPITRSFARDSSRFPMSPRPDSVHSTTSSSDS 582

>TSH1_HUMAN (Q6ZSZ6) Teashirt homolog 1 (Serologically defined colon cancer|
           antigen 3) (Antigen NY-CO-33)
          Length = 1077

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +3

Query: 24  LQLKAPSTTPLTQTASQAKCVTPTSSRPASLRSTAARSCSRPATA 158
           L LK   +T  T  ASQ +   PT + P    ST   + S P+T+
Sbjct: 134 LDLKKSGSTTSTNDASQKESSAPTPTPPTCPVSTTGPTTSTPSTS 178

>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9|
          Length = 3178

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +3

Query: 36  APSTTPLTQTASQAKCVTPTSSRPASLRSTAARSCSRPATA 158
           +PST+P+T T + +   + T + P S  ST+    S   T+
Sbjct: 452 SPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTS 492

>BTD_DROME (Q24266) Transcription factor btd (Protein buttonhead)|
          Length = 644

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +3

Query: 39  PSTT--PLTQTASQAKCVTPTSSRPASLRSTAARSCSRPATA 158
           P+TT  P T  A+ A   +PTSS P+S  ++AA + +  A A
Sbjct: 177 PTTTLAPPTTAAAGALAGSPTSSSPSSSAASAAAAAAAAAAA 218


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,416,443
Number of Sequences: 219361
Number of extensions: 506361
Number of successful extensions: 2418
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2408
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)