>SPB4_EMENI (Q5B8F4) ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)|
          Length = 638

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 23  NKGEKGRERETEVKRGEKKKWSLQTEEKIKR 115
           N+ +K + R+ +  R E+K+W   TEE+ K+
Sbjct: 564 NRNKKAKRRDMKQVRQERKRWEKMTEEEKKK 594

>SPB4_ASPOR (Q2UBZ5) ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)|
          Length = 638

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +2

Query: 23  NKGEKGRERETEVKRGEKKKWSLQTEEKIKRDRAMQHEI 139
           ++ +K + RE + +R EK KW   TEE+ ++ R  +  +
Sbjct: 565 DRNKKQKRREQKQRRQEKNKWEKMTEEERQKIRETEQMV 603

>YCF2_OENHO (Q9MEF2) Protein ycf2|
          Length = 2280

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = +2

Query: 8    EKYCINKGEKGRERETEVKRGEKKK--WSLQTEEKIKRDRAMQHE 136
            EK    K EK +E++ E KR EKK+  +  Q  EK++ DRA+Q E
Sbjct: 1170 EKRKEKKPEKRKEKKPE-KRKEKKQSLYLKQLVEKVQMDRALQGE 1213

>ABRA_PLAFC (P22620) 101 kDa malaria antigen (p101) (Acidic basic repeat|
           antigen)
          Length = 743

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 23  NKGEKGRERETEVKRGEKKKWSLQTEEKIKRDRAMQHE 136
           NK E+ +E+E E ++ EK+K   + EEK K     + E
Sbjct: 673 NKEEEEKEKEKEKEKEEKEKEEKEKEEKEKEKEEKEKE 710


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,811,307
Number of Sequences: 219361
Number of extensions: 292324
Number of successful extensions: 1162
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)