ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast79f11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190949.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 638 bits (322), Expect = e-180 Identities = 407/434 (93%), Gaps = 1/434 (0%) Strand = Plus / Plus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 185 Query: 61 cctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtctt 120 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||| || | Sbjct: 186 gctcaccatggtgcacatggccttctgctcgtccctcgccatcgcgctcgtccgcctcct 245 Query: 121 ccgcgtcgtcgacctcccctcctcgcccgccatgaccacgcagctctacaccagctccgt 180 |||||||||||| ||||| || || ||||||||||| |||||||||||||| ||| || Sbjct: 246 ccgcgtcgtcgagctcccgtcgtcccccgccatgacgccgcagctctacacctcctcggt 305 Query: 181 cctccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatcta 240 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 306 gctccccatcggcgcgctctactcgctctccctctggttctccaactccgcgtacatcta 365 Query: 241 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccat 300 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 366 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtgtactccat 425 Query: 301 cggggtgctcttcaagaaggagaccttccgctcctccgcgatgctcaacatgctctccat 360 ||| ||||||||||||||||||| |||| |||||||| |||||||||||||||||||| Sbjct: 426 cggcgtgctcttcaagaaggagaacttcaagtcctccgccatgctcaacatgctctccat 485 Query: 361 ctccttcggcgtcgccatcgccgcctacggcgaggcccgcttcgacctccgcggcgtcgc 420 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 486 ctccttcggcgtcgccatcgccgcctacggcgaggcccgcttcgacgcccgcggcgtcgc 545 Query: 421 gct-cagctcgccg 433 ||| |||||||||| Sbjct: 546 gctccagctcgccg 559
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 638 bits (322), Expect = e-180 Identities = 407/434 (93%), Gaps = 1/434 (0%) Strand = Plus / Minus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34012093 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 34012034 Query: 61 cctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtctt 120 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||| || | Sbjct: 34012033 gctcaccatggtgcacatggccttctgctcgtccctcgccatcgcgctcgtccgcctcct 34011974 Query: 121 ccgcgtcgtcgacctcccctcctcgcccgccatgaccacgcagctctacaccagctccgt 180 |||||||||||| ||||| || || ||||||||||| |||||||||||||| ||| || Sbjct: 34011973 ccgcgtcgtcgagctcccgtcgtcccccgccatgacgccgcagctctacacctcctcggt 34011914 Query: 181 cctccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatcta 240 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 34011913 gctccccatcggcgcgctctactcgctctccctctggttctccaactccgcgtacatcta 34011854 Query: 241 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccat 300 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 34011853 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtgtactccat 34011794 Query: 301 cggggtgctcttcaagaaggagaccttccgctcctccgcgatgctcaacatgctctccat 360 ||| ||||||||||||||||||| |||| |||||||| |||||||||||||||||||| Sbjct: 34011793 cggcgtgctcttcaagaaggagaacttcaagtcctccgccatgctcaacatgctctccat 34011734 Query: 361 ctccttcggcgtcgccatcgccgcctacggcgaggcccgcttcgacctccgcggcgtcgc 420 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 34011733 ctccttcggcgtcgccatcgccgcctacggcgaggcccgcttcgacgcccgcggcgtcgc 34011674 Query: 421 gct-cagctcgccg 433 ||| |||||||||| Sbjct: 34011673 gctccagctcgccg 34011660
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 638 bits (322), Expect = e-180 Identities = 407/434 (93%), Gaps = 1/434 (0%) Strand = Plus / Minus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8571 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 8512 Query: 61 cctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtctt 120 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||| || | Sbjct: 8511 gctcaccatggtgcacatggccttctgctcgtccctcgccatcgcgctcgtccgcctcct 8452 Query: 121 ccgcgtcgtcgacctcccctcctcgcccgccatgaccacgcagctctacaccagctccgt 180 |||||||||||| ||||| || || ||||||||||| |||||||||||||| ||| || Sbjct: 8451 ccgcgtcgtcgagctcccgtcgtcccccgccatgacgccgcagctctacacctcctcggt 8392 Query: 181 cctccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatcta 240 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 8391 gctccccatcggcgcgctctactcgctctccctctggttctccaactccgcgtacatcta 8332 Query: 241 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccat 300 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 8331 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtgtactccat 8272 Query: 301 cggggtgctcttcaagaaggagaccttccgctcctccgcgatgctcaacatgctctccat 360 ||| ||||||||||||||||||| |||| |||||||| |||||||||||||||||||| Sbjct: 8271 cggcgtgctcttcaagaaggagaacttcaagtcctccgccatgctcaacatgctctccat 8212 Query: 361 ctccttcggcgtcgccatcgccgcctacggcgaggcccgcttcgacctccgcggcgtcgc 420 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 8211 ctccttcggcgtcgccatcgccgcctacggcgaggcccgcttcgacgcccgcggcgtcgc 8152 Query: 421 gct-cagctcgccg 433 ||| |||||||||| Sbjct: 8151 gctccagctcgccg 8138
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003D09 Length = 161970 Score = 638 bits (322), Expect = e-180 Identities = 407/434 (93%), Gaps = 1/434 (0%) Strand = Plus / Minus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143536 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 143477 Query: 61 cctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtctt 120 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||| || | Sbjct: 143476 gctcaccatggtgcacatggccttctgctcgtccctcgccatcgcgctcgtccgcctcct 143417 Query: 121 ccgcgtcgtcgacctcccctcctcgcccgccatgaccacgcagctctacaccagctccgt 180 |||||||||||| ||||| || || ||||||||||| |||||||||||||| ||| || Sbjct: 143416 ccgcgtcgtcgagctcccgtcgtcccccgccatgacgccgcagctctacacctcctcggt 143357 Query: 181 cctccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatcta 240 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 143356 gctccccatcggcgcgctctactcgctctccctctggttctccaactccgcgtacatcta 143297 Query: 241 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccat 300 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 143296 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtgtactccat 143237 Query: 301 cggggtgctcttcaagaaggagaccttccgctcctccgcgatgctcaacatgctctccat 360 ||| ||||||||||||||||||| |||| |||||||| |||||||||||||||||||| Sbjct: 143236 cggcgtgctcttcaagaaggagaacttcaagtcctccgccatgctcaacatgctctccat 143177 Query: 361 ctccttcggcgtcgccatcgccgcctacggcgaggcccgcttcgacctccgcggcgtcgc 420 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 143176 ctccttcggcgtcgccatcgccgcctacggcgaggcccgcttcgacgcccgcggcgtcgc 143117 Query: 421 gct-cagctcgccg 433 ||| |||||||||| Sbjct: 143116 gctccagctcgccg 143103
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03, complete sequence Length = 121466 Score = 551 bits (278), Expect = e-154 Identities = 396/434 (91%), Gaps = 1/434 (0%) Strand = Plus / Plus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 28827 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttcccgatctc 28886 Query: 61 cctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtctt 120 |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || | Sbjct: 28887 cctcaccatggtccacatggccttctgctcctccctcgccgtcgccctcgtccgcctcct 28946 Query: 121 ccgcgtcgtcgacctcccctcctcgcccgccatgaccacgcagctctacaccagctccgt 180 |||||||||||| | ||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 28947 ccgcgtcgtcgagccgccctcgtcgcccgccatgaccccgcagctctacacctcctccgt 29006 Query: 181 cctccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatcta 240 | |||||||||||||||||| || | || || |||||||||||||| || |||||||| Sbjct: 29007 tgttcccatcggcgcgctctacgccatgtcgctgtggttctccaactcggcctacatcta 29066 Query: 241 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccat 300 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 29067 cctctccgtgtccttcatccagatgctcaaggcgctcatgcccgtcgccgtgtactccat 29126 Query: 301 cggggtgctcttcaagaaggagaccttccgctcctccgcgatgctcaacatgctctccat 360 |||||||||||||||||||||||||||| | || ||| | |||||||||||||||||||| Sbjct: 29127 cggggtgctcttcaagaaggagaccttcaggtcgtcctccatgctcaacatgctctccat 29186 Query: 361 ctccttcggcgtcgccatcgccgcctacggcgaggcccgcttcgacctccgcggcgtcgc 420 ||| |||||||||||||||||||| ||||||||||| |||||||| | || || ||||| Sbjct: 29187 ctcgttcggcgtcgccatcgccgcatacggcgaggcgcgcttcgatgttcggggtgtcgc 29246 Query: 421 gct-cagctcgccg 433 ||| |||||||||| Sbjct: 29247 gctgcagctcgccg 29260
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 551 bits (278), Expect = e-154 Identities = 396/434 (91%), Gaps = 1/434 (0%) Strand = Plus / Plus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 24142588 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttcccgatctc 24142647 Query: 61 cctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtctt 120 |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || | Sbjct: 24142648 cctcaccatggtccacatggccttctgctcctccctcgccgtcgccctcgtccgcctcct 24142707 Query: 121 ccgcgtcgtcgacctcccctcctcgcccgccatgaccacgcagctctacaccagctccgt 180 |||||||||||| | ||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 24142708 ccgcgtcgtcgagccgccctcgtcgcccgccatgaccccgcagctctacacctcctccgt 24142767 Query: 181 cctccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatcta 240 | |||||||||||||||||| || | || || |||||||||||||| || |||||||| Sbjct: 24142768 tgttcccatcggcgcgctctacgccatgtcgctgtggttctccaactcggcctacatcta 24142827 Query: 241 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccat 300 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 24142828 cctctccgtgtccttcatccagatgctcaaggcgctcatgcccgtcgccgtgtactccat 24142887 Query: 301 cggggtgctcttcaagaaggagaccttccgctcctccgcgatgctcaacatgctctccat 360 |||||||||||||||||||||||||||| | || ||| | |||||||||||||||||||| Sbjct: 24142888 cggggtgctcttcaagaaggagaccttcaggtcgtcctccatgctcaacatgctctccat 24142947 Query: 361 ctccttcggcgtcgccatcgccgcctacggcgaggcccgcttcgacctccgcggcgtcgc 420 ||| |||||||||||||||||||| ||||||||||| |||||||| | || || ||||| Sbjct: 24142948 ctcgttcggcgtcgccatcgccgcatacggcgaggcgcgcttcgatgttcggggtgtcgc 24143007 Query: 421 gct-cagctcgccg 433 ||| |||||||||| Sbjct: 24143008 gctgcagctcgccg 24143021
>dbj|AK059987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-H01, full insert sequence Length = 1312 Score = 551 bits (278), Expect = e-154 Identities = 396/434 (91%), Gaps = 1/434 (0%) Strand = Plus / Plus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 195 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttcccgatctc 254 Query: 61 cctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtctt 120 |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || | Sbjct: 255 cctcaccatggtccacatggccttctgctcctccctcgccgtcgccctcgtccgcctcct 314 Query: 121 ccgcgtcgtcgacctcccctcctcgcccgccatgaccacgcagctctacaccagctccgt 180 |||||||||||| | ||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 315 ccgcgtcgtcgagccgccctcgtcgcccgccatgaccccgcagctctacacctcctccgt 374 Query: 181 cctccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatcta 240 | |||||||||||||||||| || | || || |||||||||||||| || |||||||| Sbjct: 375 tgttcccatcggcgcgctctacgccatgtcgctgtggttctccaactcggcctacatcta 434 Query: 241 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccat 300 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 435 cctctccgtgtccttcatccagatgctcaaggcgctcatgcccgtcgccgtgtactccat 494 Query: 301 cggggtgctcttcaagaaggagaccttccgctcctccgcgatgctcaacatgctctccat 360 |||||||||||||||||||||||||||| | || ||| | |||||||||||||||||||| Sbjct: 495 cggggtgctcttcaagaaggagaccttcaggtcgtcctccatgctcaacatgctctccat 554 Query: 361 ctccttcggcgtcgccatcgccgcctacggcgaggcccgcttcgacctccgcggcgtcgc 420 ||| |||||||||||||||||||| ||||||||||| |||||||| | || || ||||| Sbjct: 555 ctcgttcggcgtcgccatcgccgcatacggcgaggcgcgcttcgatgttcggggtgtcgc 614 Query: 421 gct-cagctcgccg 433 ||| |||||||||| Sbjct: 615 gctgcagctcgccg 628
>dbj|AK071846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120O09, full insert sequence Length = 1576 Score = 543 bits (274), Expect = e-151 Identities = 395/434 (91%), Gaps = 1/434 (0%) Strand = Plus / Plus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 205 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttcccgatctc 264 Query: 61 cctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtctt 120 |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || | Sbjct: 265 cctcaccatggtccacatggccttctgctcctccctcgccgtcgccctcgtccgcctcct 324 Query: 121 ccgcgtcgtcgacctcccctcctcgcccgccatgaccacgcagctctacaccagctccgt 180 |||||||| ||| | ||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 325 ccgcgtcgccgagccgccctcgtcgcccgccatgaccccgcagctctacacctcctccgt 384 Query: 181 cctccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatcta 240 | |||||||||||||||||| || | || || |||||||||||||| || |||||||| Sbjct: 385 tgttcccatcggcgcgctctacgccatgtcgctgtggttctccaactcggcctacatcta 444 Query: 241 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccat 300 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 445 cctctccgtgtccttcatccagatgctcaaggcgctcatgcccgtcgccgtgtactccat 504 Query: 301 cggggtgctcttcaagaaggagaccttccgctcctccgcgatgctcaacatgctctccat 360 |||||||||||||||||||||||||||| | || ||| | |||||||||||||||||||| Sbjct: 505 cggggtgctcttcaagaaggagaccttcaggtcgtcctccatgctcaacatgctctccat 564 Query: 361 ctccttcggcgtcgccatcgccgcctacggcgaggcccgcttcgacctccgcggcgtcgc 420 ||| |||||||||||||||||||| ||||||||||| |||||||| | || || ||||| Sbjct: 565 ctcgttcggcgtcgccatcgccgcatacggcgaggcgcgcttcgatgttcggggtgtcgc 624 Query: 421 gct-cagctcgccg 433 ||| |||||||||| Sbjct: 625 gctgcagctcgccg 638
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 305 bits (154), Expect = 6e-80 Identities = 264/298 (88%), Gaps = 2/298 (0%) Strand = Plus / Plus Query: 2 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 61 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 29847 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 29906 Query: 62 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 121 ||||||||| | |||||||| |||||| ||||||||||||| | |||||| |||||| || Sbjct: 29907 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgttcgcgtcctc 29966 Query: 122 cgcgtcgtcgacctcccctcctcgcccgccatgaccacgcagc-tctacaccagctccgt 180 |||||||||| | | || | ||||| ||||||| | |||| ||||| || |||||| Sbjct: 29967 cgcgtcgtcgccgtgccggcgtcgccgcccatgacgcc-cagcctctacgccgcctccgt 30025 Query: 181 cctccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatcta 240 | | |||||||||||||||||| | || || ||||||||||||||||||||||||||||| Sbjct: 30026 cgtgcccatcggcgcgctctacgcgctgtcgctctggttctccaactccgcatacatcta 30085 Query: 241 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactcc 298 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30086 cctttccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactcc 30143 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| ||||||||| |||| |||||||||||||| || Sbjct: 30186 atgctcaacatgctcggcatctccgcgggcgtcgccgtcgcggcctacggcgaggctcgg 30245 Query: 401 ttcgac 406 |||||| Sbjct: 30246 ttcgac 30251
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 305 bits (154), Expect = 6e-80 Identities = 264/298 (88%), Gaps = 2/298 (0%) Strand = Plus / Plus Query: 2 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 61 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 1812017 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 1812076 Query: 62 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 121 ||||||||| | |||||||| |||||| ||||||||||||| | |||||| |||||| || Sbjct: 1812077 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgttcgcgtcctc 1812136 Query: 122 cgcgtcgtcgacctcccctcctcgcccgccatgaccacgcagc-tctacaccagctccgt 180 |||||||||| | | || | ||||| ||||||| | |||| ||||| || |||||| Sbjct: 1812137 cgcgtcgtcgccgtgccggcgtcgccgcccatgacgcc-cagcctctacgccgcctccgt 1812195 Query: 181 cctccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatcta 240 | | |||||||||||||||||| | || || ||||||||||||||||||||||||||||| Sbjct: 1812196 cgtgcccatcggcgcgctctacgcgctgtcgctctggttctccaactccgcatacatcta 1812255 Query: 241 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactcc 298 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1812256 cctttccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactcc 1812313 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| ||||||||| |||| |||||||||||||| || Sbjct: 1812356 atgctcaacatgctcggcatctccgcgggcgtcgccgtcgcggcctacggcgaggctcgg 1812415 Query: 401 ttcgac 406 |||||| Sbjct: 1812416 ttcgac 1812421
>dbj|AK107562.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-B12, full insert sequence Length = 1589 Score = 305 bits (154), Expect = 6e-80 Identities = 264/298 (88%), Gaps = 2/298 (0%) Strand = Plus / Plus Query: 2 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 61 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 278 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 337 Query: 62 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 121 ||||||||| | |||||||| |||||| ||||||||||||| | |||||| |||||| || Sbjct: 338 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgttcgcgtcctc 397 Query: 122 cgcgtcgtcgacctcccctcctcgcccgccatgaccacgcagc-tctacaccagctccgt 180 |||||||||| | | || | ||||| ||||||| | |||| ||||| || |||||| Sbjct: 398 cgcgtcgtcgccgtgccggcgtcgccgcccatgacgcc-cagcctctacgccgcctccgt 456 Query: 181 cctccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatcta 240 | | |||||||||||||||||| | || || ||||||||||||||||||||||||||||| Sbjct: 457 cgtgcccatcggcgcgctctacgcgctgtcgctctggttctccaactccgcatacatcta 516 Query: 241 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactcc 298 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 517 cctttccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactcc 574 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| ||||||||| |||| |||||||||||||| || Sbjct: 617 atgctcaacatgctcggcatctccgcgggcgtcgccgtcgcggcctacggcgaggctcgg 676 Query: 401 ttcgac 406 |||||| Sbjct: 677 ttcgac 682
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 305 bits (154), Expect = 6e-80 Identities = 264/298 (88%), Gaps = 2/298 (0%) Strand = Plus / Plus Query: 2 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 61 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 1809738 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 1809797 Query: 62 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 121 ||||||||| | |||||||| |||||| ||||||||||||| | |||||| |||||| || Sbjct: 1809798 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgttcgcgtcctc 1809857 Query: 122 cgcgtcgtcgacctcccctcctcgcccgccatgaccacgcagc-tctacaccagctccgt 180 |||||||||| | | || | ||||| ||||||| | |||| ||||| || |||||| Sbjct: 1809858 cgcgtcgtcgccgtgccggcgtcgccgcccatgacgcc-cagcctctacgccgcctccgt 1809916 Query: 181 cctccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatcta 240 | | |||||||||||||||||| | || || ||||||||||||||||||||||||||||| Sbjct: 1809917 cgtgcccatcggcgcgctctacgcgctgtcgctctggttctccaactccgcatacatcta 1809976 Query: 241 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactcc 298 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1809977 cctttccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactcc 1810034 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| ||||||||| |||| |||||||||||||| || Sbjct: 1810077 atgctcaacatgctcggcatctccgcgggcgtcgccgtcgcggcctacggcgaggctcgg 1810136 Query: 401 ttcgac 406 |||||| Sbjct: 1810137 ttcgac 1810142
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 182 bits (92), Expect = 6e-43 Identities = 116/124 (93%) Strand = Plus / Plus Query: 175 ctccgtcctccccatcggcgcgctctactccctctccctctggttctccaactccgcata 234 ||||||| | || ||||||||||||||| | || || |||||||||||||||||||| || Sbjct: 1751260 ctccgtcgtgccgatcggcgcgctctacgcgctgtcgctctggttctccaactccgcgta 1751319 Query: 235 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1751320 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 1751379 Query: 295 ctcc 298 |||| Sbjct: 1751380 ctcc 1751383 Score = 170 bits (86), Expect = 2e-39 Identities = 119/130 (91%) Strand = Plus / Plus Query: 2 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 61 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 1751087 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 1751146 Query: 62 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 121 ||||||||| | |||||||| |||||| ||||||||||||| | ||||||||||||| || Sbjct: 1751147 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgtccgcgtcctc 1751206 Query: 122 cgcgtcgtcg 131 |||||||||| Sbjct: 1751207 cgcgtcgtcg 1751216 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| ||||||||| | || |||||||||||||| || Sbjct: 1751426 atgctcaacatgctcggcatctccgcgggcgtcgccgtggctgcctacggcgaggcgcgg 1751485 Query: 401 ttcgac 406 |||||| Sbjct: 1751486 ttcgac 1751491
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 182 bits (92), Expect = 6e-43 Identities = 116/124 (93%) Strand = Plus / Plus Query: 175 ctccgtcctccccatcggcgcgctctactccctctccctctggttctccaactccgcata 234 ||||||| | || ||||||||||||||| | || || |||||||||||||||||||| || Sbjct: 1751237 ctccgtcgtgccgatcggcgcgctctacgcgctgtcgctctggttctccaactccgcgta 1751296 Query: 235 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1751297 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 1751356 Query: 295 ctcc 298 |||| Sbjct: 1751357 ctcc 1751360 Score = 170 bits (86), Expect = 2e-39 Identities = 119/130 (91%) Strand = Plus / Plus Query: 2 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 61 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 1751064 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 1751123 Query: 62 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 121 ||||||||| | |||||||| |||||| ||||||||||||| | ||||||||||||| || Sbjct: 1751124 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgtccgcgtcctc 1751183 Query: 122 cgcgtcgtcg 131 |||||||||| Sbjct: 1751184 cgcgtcgtcg 1751193 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| ||||||||| | || |||||||||||||| || Sbjct: 1751403 atgctcaacatgctcggcatctccgcgggcgtcgccgtggctgcctacggcgaggcgcgg 1751462 Query: 401 ttcgac 406 |||||| Sbjct: 1751463 ttcgac 1751468
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 182 bits (92), Expect = 6e-43 Identities = 116/124 (93%) Strand = Plus / Minus Query: 175 ctccgtcctccccatcggcgcgctctactccctctccctctggttctccaactccgcata 234 ||||||| | || ||||||||||||||| | || || |||||||||||||||||||| || Sbjct: 89223 ctccgtcgtgccgatcggcgcgctctacgcgctgtcgctctggttctccaactccgcgta 89164 Query: 235 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89163 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 89104 Query: 295 ctcc 298 |||| Sbjct: 89103 ctcc 89100 Score = 170 bits (86), Expect = 2e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 2 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 61 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 89396 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 89337 Query: 62 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 121 ||||||||| | |||||||| |||||| ||||||||||||| | ||||||||||||| || Sbjct: 89336 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgtccgcgtcctc 89277 Query: 122 cgcgtcgtcg 131 |||||||||| Sbjct: 89276 cgcgtcgtcg 89267 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| ||||||||| | || |||||||||||||| || Sbjct: 89057 atgctcaacatgctcggcatctccgcgggcgtcgccgtggctgcctacggcgaggcgcgg 88998 Query: 401 ttcgac 406 |||||| Sbjct: 88997 ttcgac 88992
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 182 bits (92), Expect = 6e-43 Identities = 116/124 (93%) Strand = Plus / Minus Query: 175 ctccgtcctccccatcggcgcgctctactccctctccctctggttctccaactccgcata 234 ||||||| | || ||||||||||||||| | || || |||||||||||||||||||| || Sbjct: 15661 ctccgtcgtgccgatcggcgcgctctacgcgctgtcgctctggttctccaactccgcgta 15602 Query: 235 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15601 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 15542 Query: 295 ctcc 298 |||| Sbjct: 15541 ctcc 15538 Score = 170 bits (86), Expect = 2e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 2 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 61 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 15834 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 15775 Query: 62 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 121 ||||||||| | |||||||| |||||| ||||||||||||| | ||||||||||||| || Sbjct: 15774 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgtccgcgtcctc 15715 Query: 122 cgcgtcgtcg 131 |||||||||| Sbjct: 15714 cgcgtcgtcg 15705 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| ||||||||| | || |||||||||||||| || Sbjct: 15495 atgctcaacatgctcggcatctccgcgggcgtcgccgtggctgcctacggcgaggcgcgg 15436 Query: 401 ttcgac 406 |||||| Sbjct: 15435 ttcgac 15430
>ref|XM_463210.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1110 Score = 170 bits (86), Expect = 2e-39 Identities = 113/122 (92%) Strand = Plus / Plus Query: 175 ctccgtcctccccatcggcgcgctctactccctctccctctggttctccaactccgcata 234 ||||||| | |||||||||| ||||||| | || || ||||||||||||||||||||||| Sbjct: 687 ctccgtcgtgcccatcggcgtgctctacgcgctgtcgctctggttctccaactccgcata 746 Query: 235 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 294 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 747 catctacctctctgtctccttcatccagatgctcaaggcgctcatgcccgtcaccgtcta 806 Query: 295 ct 296 || Sbjct: 807 ct 808 Score = 103 bits (52), Expect = 5e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 8 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 67 |||||||||||||||||| | |||| ||||||||||||||| |||||| | || |||||| Sbjct: 520 tacaacaagtacatcctcaatcccacgatgtacaactggccattccccgtatcgctcacc 579 Query: 68 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 127 ||||| |||| ||| || ||| |||||||| | || | |||| |||||||| |||||||| Sbjct: 580 atggtccacacggcgttttgcgcctccctcactgtggtgctcatccgcgtcctccgcgtc 639 Query: 128 gtcg 131 |||| Sbjct: 640 gtcg 643 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| ||| ||||| |||||||||| |||||||| || Sbjct: 853 atgctcaacatgctcggcatctccgcgggcatcgccgtcgccgcctatggcgaggcgcgg 912 Query: 401 ttcgac 406 |||||| Sbjct: 913 ttcgac 918
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 170 bits (86), Expect = 2e-39 Identities = 113/122 (92%) Strand = Plus / Plus Query: 175 ctccgtcctccccatcggcgcgctctactccctctccctctggttctccaactccgcata 234 ||||||| | |||||||||| ||||||| | || || ||||||||||||||||||||||| Sbjct: 23444508 ctccgtcgtgcccatcggcgtgctctacgcgctgtcgctctggttctccaactccgcata 23444567 Query: 235 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 294 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 23444568 catctacctctctgtctccttcatccagatgctcaaggcgctcatgcccgtcaccgtcta 23444627 Query: 295 ct 296 || Sbjct: 23444628 ct 23444629 Score = 125 bits (63), Expect = 1e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 212 ctctggttctccaactccgcatacatctacctctccgtctccttcatccagatgctcaag 271 ||||||||||||||||| |||||||| |||||||| |||||||||||| ||||||||||| Sbjct: 10616491 ctctggttctccaactctgcatacatatacctctctgtctccttcatctagatgctcaag 10616550 Query: 272 gcgctcatgcccgtcgccgtctactcc 298 || ||||||||||||||||||||||| Sbjct: 10616551 gcattcatgcccgtcgccgtctactcc 10616577 Score = 103 bits (52), Expect = 5e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 8 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 67 |||||||||||||||||| | |||| ||||||||||||||| |||||| | || |||||| Sbjct: 23444341 tacaacaagtacatcctcaatcccacgatgtacaactggccattccccgtatcgctcacc 23444400 Query: 68 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 127 ||||| |||| ||| || ||| |||||||| | || | |||| |||||||| |||||||| Sbjct: 23444401 atggtccacacggcgttttgcgcctccctcactgtggtgctcatccgcgtcctccgcgtc 23444460 Query: 128 gtcg 131 |||| Sbjct: 23444461 gtcg 23444464 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| ||| ||||| |||||||||| |||||||| || Sbjct: 23444674 atgctcaacatgctcggcatctccgcgggcatcgccgtcgccgcctatggcgaggcgcgg 23444733 Query: 401 ttcgac 406 |||||| Sbjct: 23444734 ttcgac 23444739 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 370 cgtcgccatcgccgcctacggcgaggcccgcttcgac 406 ||||||| ||||||||||||||||||| || |||||| Sbjct: 10616655 cgtcgccgtcgccgcctacggcgaggcgcggttcgac 10616691 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 271 ggcgctcatgcccgtcgccgtctactcc 298 |||||| ||||| ||||||||||||||| Sbjct: 7768840 ggcgcttatgcctgtcgccgtctactcc 7768867 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 catcgccgcctacggcgagg 395 |||||||||||||||||||| Sbjct: 6426820 catcgccgcctacggcgagg 6426801
>gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genomic sequence, complete sequence Length = 144383 Score = 170 bits (86), Expect = 2e-39 Identities = 113/122 (92%) Strand = Plus / Minus Query: 175 ctccgtcctccccatcggcgcgctctactccctctccctctggttctccaactccgcata 234 ||||||| | |||||||||| ||||||| | || || ||||||||||||||||||||||| Sbjct: 137749 ctccgtcgtgcccatcggcgtgctctacgcgctgtcgctctggttctccaactccgcata 137690 Query: 235 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 294 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 137689 catctacctctctgtctccttcatccagatgctcaaggcgctcatgcccgtcaccgtcta 137630 Query: 295 ct 296 || Sbjct: 137629 ct 137628 Score = 103 bits (52), Expect = 5e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 8 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 67 |||||||||||||||||| | |||| ||||||||||||||| |||||| | || |||||| Sbjct: 137916 tacaacaagtacatcctcaatcccacgatgtacaactggccattccccgtatcgctcacc 137857 Query: 68 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 127 ||||| |||| ||| || ||| |||||||| | || | |||| |||||||| |||||||| Sbjct: 137856 atggtccacacggcgttttgcgcctccctcactgtggtgctcatccgcgtcctccgcgtc 137797 Query: 128 gtcg 131 |||| Sbjct: 137796 gtcg 137793 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| ||| ||||| |||||||||| |||||||| || Sbjct: 137583 atgctcaacatgctcggcatctccgcgggcatcgccgtcgccgcctatggcgaggcgcgg 137524 Query: 401 ttcgac 406 |||||| Sbjct: 137523 ttcgac 137518
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 170 bits (86), Expect = 2e-39 Identities = 113/122 (92%) Strand = Plus / Plus Query: 175 ctccgtcctccccatcggcgcgctctactccctctccctctggttctccaactccgcata 234 ||||||| | |||||||||| ||||||| | || || ||||||||||||||||||||||| Sbjct: 23437536 ctccgtcgtgcccatcggcgtgctctacgcgctgtcgctctggttctccaactccgcata 23437595 Query: 235 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 294 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 23437596 catctacctctctgtctccttcatccagatgctcaaggcgctcatgcccgtcaccgtcta 23437655 Query: 295 ct 296 || Sbjct: 23437656 ct 23437657 Score = 125 bits (63), Expect = 1e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 212 ctctggttctccaactccgcatacatctacctctccgtctccttcatccagatgctcaag 271 ||||||||||||||||| |||||||| |||||||| |||||||||||| ||||||||||| Sbjct: 10614592 ctctggttctccaactctgcatacatatacctctctgtctccttcatctagatgctcaag 10614651 Query: 272 gcgctcatgcccgtcgccgtctactcc 298 || ||||||||||||||||||||||| Sbjct: 10614652 gcattcatgcccgtcgccgtctactcc 10614678 Score = 103 bits (52), Expect = 5e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 8 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 67 |||||||||||||||||| | |||| ||||||||||||||| |||||| | || |||||| Sbjct: 23437369 tacaacaagtacatcctcaatcccacgatgtacaactggccattccccgtatcgctcacc 23437428 Query: 68 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 127 ||||| |||| ||| || ||| |||||||| | || | |||| |||||||| |||||||| Sbjct: 23437429 atggtccacacggcgttttgcgcctccctcactgtggtgctcatccgcgtcctccgcgtc 23437488 Query: 128 gtcg 131 |||| Sbjct: 23437489 gtcg 23437492 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| ||| ||||| |||||||||| |||||||| || Sbjct: 23437702 atgctcaacatgctcggcatctccgcgggcatcgccgtcgccgcctatggcgaggcgcgg 23437761 Query: 401 ttcgac 406 |||||| Sbjct: 23437762 ttcgac 23437767 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 370 cgtcgccatcgccgcctacggcgaggcccgcttcgac 406 ||||||| ||||||||||||||||||| || |||||| Sbjct: 10614756 cgtcgccgtcgccgcctacggcgaggcgcggttcgac 10614792 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 271 ggcgctcatgcccgtcgccgtctactcc 298 |||||| ||||| ||||||||||||||| Sbjct: 7766675 ggcgcttatgcctgtcgccgtctactcc 7766702 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 catcgccgcctacggcgagg 395 |||||||||||||||||||| Sbjct: 6426033 catcgccgcctacggcgagg 6426014
>gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genomic sequence, complete sequence Length = 129647 Score = 170 bits (86), Expect = 2e-39 Identities = 113/122 (92%) Strand = Plus / Plus Query: 175 ctccgtcctccccatcggcgcgctctactccctctccctctggttctccaactccgcata 234 ||||||| | |||||||||| ||||||| | || || ||||||||||||||||||||||| Sbjct: 127164 ctccgtcgtgcccatcggcgtgctctacgcgctgtcgctctggttctccaactccgcata 127223 Query: 235 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 294 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 127224 catctacctctctgtctccttcatccagatgctcaaggcgctcatgcccgtcaccgtcta 127283 Query: 295 ct 296 || Sbjct: 127284 ct 127285 Score = 103 bits (52), Expect = 5e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 8 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 67 |||||||||||||||||| | |||| ||||||||||||||| |||||| | || |||||| Sbjct: 126997 tacaacaagtacatcctcaatcccacgatgtacaactggccattccccgtatcgctcacc 127056 Query: 68 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 127 ||||| |||| ||| || ||| |||||||| | || | |||| |||||||| |||||||| Sbjct: 127057 atggtccacacggcgttttgcgcctccctcactgtggtgctcatccgcgtcctccgcgtc 127116 Query: 128 gtcg 131 |||| Sbjct: 127117 gtcg 127120 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| ||| ||||| |||||||||| |||||||| || Sbjct: 127330 atgctcaacatgctcggcatctccgcgggcatcgccgtcgccgcctatggcgaggcgcgg 127389 Query: 401 ttcgac 406 |||||| Sbjct: 127390 ttcgac 127395
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 165 bits (83), Expect = 1e-37 Identities = 114/123 (92%), Gaps = 1/123 (0%) Strand = Plus / Minus Query: 175 ctccgtcctccccatcgg-cgcgctctactccctctccctctggttctccaactccgcat 233 ||||||| | |||||||| || ||||||| | || || |||||||||||||||||||||| Sbjct: 44480 ctccgtcgtgcccatcgggcgtgctctacgcgctgtcgctctggttctccaactccgcat 44421 Query: 234 acatctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtct 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 44420 acatctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgtcgtct 44361 Query: 294 act 296 ||| Sbjct: 44360 act 44358 Score = 119 bits (60), Expect = 8e-24 Identities = 108/124 (87%) Strand = Plus / Minus Query: 8 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 67 |||||||||||||||||||| |||| ||||||||||||||| |||||||| || |||||| Sbjct: 44647 tacaacaagtacatcctcgatcccacgatgtacaactggccattccccatatcgctcacc 44588 Query: 68 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 127 ||||| ||||||| || ||| | |||||||| || | ||||||||||||| ||||||| Sbjct: 44587 atggtccacatggtgttttgcgcttccctcgctgtggtgctcgtccgcgtcctccgcgtt 44528 Query: 128 gtcg 131 |||| Sbjct: 44527 gtcg 44524 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| ||| ||||| ||||||||||||||||||| || Sbjct: 44313 atgctcaacatgctcggcatctccgcgggcatcgccgtcgccgcctacggcgaggcgcgg 44254 Query: 401 ttcgac 406 |||||| Sbjct: 44253 ttcgac 44248
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 165 bits (83), Expect = 1e-37 Identities = 114/123 (92%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 175 ctccgtcctccccatcgg-cgcgctctactccctctccctctggttctccaactccgcat 233 ||||||| | |||||||| || ||||||| | || || |||||||||||||||||||||| Sbjct: 17887561 ctccgtcgtgcccatcgggcgtgctctacgcgctgtcgctctggttctccaactccgcat 17887620 Query: 234 acatctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtct 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 17887621 acatctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgtcgtct 17887680 Query: 294 act 296 ||| Sbjct: 17887681 act 17887683 Score = 119 bits (60), Expect = 8e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 8 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 67 |||||||||||||||||||| |||| ||||||||||||||| |||||||| || |||||| Sbjct: 17887394 tacaacaagtacatcctcgatcccacgatgtacaactggccattccccatatcgctcacc 17887453 Query: 68 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 127 ||||| ||||||| || ||| | |||||||| || | ||||||||||||| ||||||| Sbjct: 17887454 atggtccacatggtgttttgcgcttccctcgctgtggtgctcgtccgcgtcctccgcgtt 17887513 Query: 128 gtcg 131 |||| Sbjct: 17887514 gtcg 17887517 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| ||| ||||| ||||||||||||||||||| || Sbjct: 17887728 atgctcaacatgctcggcatctccgcgggcatcgccgtcgccgcctacggcgaggcgcgg 17887787 Query: 401 ttcgac 406 |||||| Sbjct: 17887788 ttcgac 17887793
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 165 bits (83), Expect = 1e-37 Identities = 114/123 (92%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 175 ctccgtcctccccatcgg-cgcgctctactccctctccctctggttctccaactccgcat 233 ||||||| | |||||||| || ||||||| | || || |||||||||||||||||||||| Sbjct: 17896814 ctccgtcgtgcccatcgggcgtgctctacgcgctgtcgctctggttctccaactccgcat 17896873 Query: 234 acatctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtct 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 17896874 acatctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgtcgtct 17896933 Query: 294 act 296 ||| Sbjct: 17896934 act 17896936 Score = 119 bits (60), Expect = 8e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 8 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 67 |||||||||||||||||||| |||| ||||||||||||||| |||||||| || |||||| Sbjct: 17896647 tacaacaagtacatcctcgatcccacgatgtacaactggccattccccatatcgctcacc 17896706 Query: 68 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 127 ||||| ||||||| || ||| | |||||||| || | ||||||||||||| ||||||| Sbjct: 17896707 atggtccacatggtgttttgcgcttccctcgctgtggtgctcgtccgcgtcctccgcgtt 17896766 Query: 128 gtcg 131 |||| Sbjct: 17896767 gtcg 17896770 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| ||| ||||| ||||||||||||||||||| || Sbjct: 17896981 atgctcaacatgctcggcatctccgcgggcatcgccgtcgccgcctacggcgaggcgcgg 17897040 Query: 401 ttcgac 406 |||||| Sbjct: 17897041 ttcgac 17897046
>gb|AY105280.1| Zea mays PCO151044 mRNA sequence Length = 1004 Score = 135 bits (68), Expect = 1e-28 Identities = 105/116 (90%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 319 ggagaccttccgctcctccgcgatgctcaacatgctctccatctccttcggcgtcgccat 378 |||||||||| | |||||| | ||||||||||||||||||||||| ||||| || ||||| Sbjct: 8 ggagaccttcaggtcctcctccatgctcaacatgctctccatctcattcggtgttgccat 67 Query: 379 cgccgcctacggcgaggcccgcttcgacctccgcggcgtcgcgct-cagctcgccg 433 |||||||||||||||||| ||||||||| | |||||||||||||| |||||||||| Sbjct: 68 cgccgcctacggcgaggcgcgcttcgacgtgcgcggcgtcgcgctgcagctcgccg 123
>gb|AY109497.1| Zea mays CL2656_1 mRNA sequence Length = 927 Score = 129 bits (65), Expect = 8e-27 Identities = 80/85 (94%) Strand = Plus / Minus Query: 322 gaccttccgctcctccgcgatgctcaacatgctctccatctccttcggcgtcgccatcgc 381 ||||||| | |||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 927 gaccttcaggtcctccgccatgctcaacatgctctccatctcgttcggcgtcgccatcgc 868 Query: 382 cgcctacggcgaggcccgcttcgac 406 ||| ||||||||||||||||||||| Sbjct: 867 cgcgtacggcgaggcccgcttcgac 843
>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G21, from chromosome 3, complete sequence Length = 187621 Score = 125 bits (63), Expect = 1e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 212 ctctggttctccaactccgcatacatctacctctccgtctccttcatccagatgctcaag 271 ||||||||||||||||| |||||||| |||||||| |||||||||||| ||||||||||| Sbjct: 33405 ctctggttctccaactctgcatacatatacctctctgtctccttcatctagatgctcaag 33464 Query: 272 gcgctcatgcccgtcgccgtctactcc 298 || ||||||||||||||||||||||| Sbjct: 33465 gcattcatgcccgtcgccgtctactcc 33491 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 370 cgtcgccatcgccgcctacggcgaggcccgcttcgac 406 ||||||| ||||||||||||||||||| || |||||| Sbjct: 33569 cgtcgccgtcgccgcctacggcgaggcgcggttcgac 33605
>ref|NM_197083.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0029C15.18), mRNA Length = 1005 Score = 119 bits (60), Expect = 8e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 8 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 67 |||||||||||||||||||| |||| ||||||||||||||| |||||||| || |||||| Sbjct: 358 tacaacaagtacatcctcgatcccacgatgtacaactggccattccccatatcgctcacc 417 Query: 68 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 127 ||||| ||||||| || ||| | |||||||| || | ||||||||||||| ||||||| Sbjct: 418 atggtccacatggtgttttgcgcttccctcgctgtggtgctcgtccgcgtcctccgcgtt 477 Query: 128 gtcg 131 |||| Sbjct: 478 gtcg 481 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| ||| ||||| ||||||||||||||||||| || Sbjct: 637 atgctcaacatgctcggcatctccgcgggcatcgccgtcgccgcctacggcgaggcgcgg 696 Query: 401 ttcgac 406 |||||| Sbjct: 697 ttcgac 702 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 ggcgctcatgcccgtcgccgtctact 296 ||||||||||||||||| |||||||| Sbjct: 567 ggcgctcatgcccgtcgtcgtctact 592
>ref|NM_119391.1| Arabidopsis thaliana organic anion transporter AT4G32390 mRNA, complete cds Length = 1053 Score = 89.7 bits (45), Expect = 7e-15 Identities = 102/121 (84%) Strand = Plus / Plus Query: 183 tccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatctacc 242 |||| ||||| || || ||||| || || |||||| ||||||| ||||| ||||| |||| Sbjct: 269 tcccgatcggtgctctgtactcgctttctctctggctctccaattccgcttacatttacc 328 Query: 243 tctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccatcg 302 |||||||||||||||| ||||||||||| || || ||||| ||||| || ||||| |||| Sbjct: 329 tctccgtctccttcattcagatgctcaaagctctaatgcctgtcgctgtttactcaatcg 388 Query: 303 g 303 | Sbjct: 389 g 389 Score = 85.7 bits (43), Expect = 1e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 60 ||||||||||||||| |||||||||||| ||||||||||| ||||| || || ||| | Sbjct: 96 catcgtctacaacaaatacatcctcgacaagaagatgtacaattggccttttccgatcac 155 Query: 61 cctcaccatggtgcacatggccttctgctcctccctcgccgtc 103 ||||||||| | |||||||| || ||||| |||||||||||| Sbjct: 156 actcaccatgatccacatggctttttgctcttccctcgccgtc 198
>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77 Length = 197252 Score = 89.7 bits (45), Expect = 7e-15 Identities = 102/121 (84%) Strand = Plus / Plus Query: 183 tccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatctacc 242 |||| ||||| || || ||||| || || |||||| ||||||| ||||| ||||| |||| Sbjct: 50827 tcccgatcggtgctctgtactcgctttctctctggctctccaattccgcttacatttacc 50886 Query: 243 tctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccatcg 302 |||||||||||||||| ||||||||||| || || ||||| ||||| || ||||| |||| Sbjct: 50887 tctccgtctccttcattcagatgctcaaagctctaatgcctgtcgctgtttactcaatcg 50946 Query: 303 g 303 | Sbjct: 50947 g 50947 Score = 85.7 bits (43), Expect = 1e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 60 ||||||||||||||| |||||||||||| ||||||||||| ||||| || || ||| | Sbjct: 50654 catcgtctacaacaaatacatcctcgacaagaagatgtacaattggccttttccgatcac 50713 Query: 61 cctcaccatggtgcacatggccttctgctcctccctcgccgtc 103 ||||||||| | |||||||| || ||||| |||||||||||| Sbjct: 50714 actcaccatgatccacatggctttttgctcttccctcgccgtc 50756
>emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4, BAC clone F8B4 (ESSA project) Length = 93257 Score = 89.7 bits (45), Expect = 7e-15 Identities = 102/121 (84%) Strand = Plus / Plus Query: 183 tccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatctacc 242 |||| ||||| || || ||||| || || |||||| ||||||| ||||| ||||| |||| Sbjct: 37110 tcccgatcggtgctctgtactcgctttctctctggctctccaattccgcttacatttacc 37169 Query: 243 tctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccatcg 302 |||||||||||||||| ||||||||||| || || ||||| ||||| || ||||| |||| Sbjct: 37170 tctccgtctccttcattcagatgctcaaagctctaatgcctgtcgctgtttactcaatcg 37229 Query: 303 g 303 | Sbjct: 37230 g 37230 Score = 85.7 bits (43), Expect = 1e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 60 ||||||||||||||| |||||||||||| ||||||||||| ||||| || || ||| | Sbjct: 36937 catcgtctacaacaaatacatcctcgacaagaagatgtacaattggccttttccgatcac 36996 Query: 61 cctcaccatggtgcacatggccttctgctcctccctcgccgtc 103 ||||||||| | |||||||| || ||||| |||||||||||| Sbjct: 36997 actcaccatgatccacatggctttttgctcttccctcgccgtc 37039
>ref|NM_122449.1| Arabidopsis thaliana organic anion transporter AT5G25400 mRNA, complete cds Length = 1050 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 206 ctctccctctggttctccaactccgcatacatctacctctccgtctccttcatccagatg 265 ||||| || ||| |||| ||||| || ||||| |||||||| ||||||||||| |||||| Sbjct: 292 ctctctctttggctctctaactcagcctacatttacctctcggtctccttcattcagatg 351 Query: 266 ctcaaggcgctcatgcccgtcgccgtctactccatcggggtgctcttcaagaa 318 ||||| ||| | ||||| |||||||| || || || || |||||||||||||| Sbjct: 352 ctcaaagcgttaatgccagtcgccgtttattcaattggcgtgctcttcaagaa 404 Score = 60.0 bits (30), Expect = 6e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 60 ||||||||||||||| || ||||||||| ||||||||| | ||||| ||||| ||||| Sbjct: 96 catcgtctacaacaaatatatcctcgacaagaagatgtacgattggccattcccgatctc 155 Query: 61 cctcaccatggtgcacatggccttctgctc 90 ||||| ||| | |||||| |||| ||||| Sbjct: 156 actcacaatgatccacatgtccttttgctc 185
>gb|AC006258.1| Arabidopsis thaliana BAC F18G18 from chromosome V near 60.5 cM, complete sequence Length = 110469 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 206 ctctccctctggttctccaactccgcatacatctacctctccgtctccttcatccagatg 265 ||||| || ||| |||| ||||| || ||||| |||||||| ||||||||||| |||||| Sbjct: 65643 ctctctctttggctctctaactcagcctacatttacctctcggtctccttcattcagatg 65702 Query: 266 ctcaaggcgctcatgcccgtcgccgtctactccatcggggtgctcttcaagaa 318 ||||| ||| | ||||| |||||||| || || || || |||||||||||||| Sbjct: 65703 ctcaaagcgttaatgccagtcgccgtttattcaattggcgtgctcttcaagaa 65755 Score = 60.0 bits (30), Expect = 6e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 60 ||||||||||||||| || ||||||||| ||||||||| | ||||| ||||| ||||| Sbjct: 65447 catcgtctacaacaaatatatcctcgacaagaagatgtacgattggccattcccgatctc 65506 Query: 61 cctcaccatggtgcacatggccttctgctc 90 ||||| ||| | |||||| |||| ||||| Sbjct: 65507 actcacaatgatccacatgtccttttgctc 65536
>gb|AY616052.1| Prototheca wickerhamii putative phosphate/phosphoenolpyruvate translocator protein-like mRNA, partial sequence Length = 635 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 251 tccttcatccagatgctcaaggcgctcatgcccgtcgccgt 291 ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 383 tccttcatccagatgctcaaggcgctcatgcccgtggccgt 423
>ref|NM_128109.2| Arabidopsis thaliana organic anion transporter AT2G25520 mRNA, complete cds Length = 1530 Score = 69.9 bits (35), Expect = 7e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 188 atcggcgcgctctactccctctccctctggttctccaactccgcatacatctacctctcc 247 ||||||||| | ||||| || || |||||||| || ||||| || |||||||||||||| Sbjct: 396 atcggcgcgttgtactcactttctctctggttatcaaactctgcttacatctacctctct 455 Query: 248 gtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccatcggggt 306 || |||||||| || |||||||| || || ||||| || || || ||||| |||||||| Sbjct: 456 gtttccttcattcaaatgctcaaagccctaatgcctgtagcagtttactcaatcggggt 514 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 60 ||||||||||||||| |||||||||||| |||||||| || ||||| ||||| || | Sbjct: 218 catcgtctacaacaaatacatcctcgacaagaagatgtataattggccattcccaataac 277 Query: 61 cctcaccatggtgcacatgg 80 ||||||||| | ||||||| Sbjct: 278 tctcaccatgatccacatgg 297
>gb|AY056179.1| Arabidopsis thaliana putative phosphate/phosphoenolpyruvate translocator protein (At2g25520) mRNA, complete cds Length = 1547 Score = 69.9 bits (35), Expect = 7e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 188 atcggcgcgctctactccctctccctctggttctccaactccgcatacatctacctctcc 247 ||||||||| | ||||| || || |||||||| || ||||| || |||||||||||||| Sbjct: 396 atcggcgcgttgtactcactttctctctggttatcaaactctgcttacatctacctctct 455 Query: 248 gtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccatcggggt 306 || |||||||| || |||||||| || || ||||| || || || ||||| |||||||| Sbjct: 456 gtttccttcattcaaatgctcaaagccctaatgcctgtagcagtttactcaatcggggt 514 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 60 ||||||||||||||| |||||||||||| |||||||| || ||||| ||||| || | Sbjct: 218 catcgtctacaacaaatacatcctcgacaagaagatgtataattggccattcccaataac 277 Query: 61 cctcaccatggtgcacatgg 80 ||||||||| | ||||||| Sbjct: 278 tctcaccatgatccacatgg 297
>gb|AC006300.4| Arabidopsis thaliana chromosome 2 clone F13B15 map mi238, complete sequence Length = 88770 Score = 69.9 bits (35), Expect = 7e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 188 atcggcgcgctctactccctctccctctggttctccaactccgcatacatctacctctcc 247 ||||||||| | ||||| || || |||||||| || ||||| || |||||||||||||| Sbjct: 60439 atcggcgcgttgtactcactttctctctggttatcaaactctgcttacatctacctctct 60498 Query: 248 gtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccatcggggt 306 || |||||||| || |||||||| || || ||||| || || || ||||| |||||||| Sbjct: 60499 gtttccttcattcaaatgctcaaagccctaatgcctgtagcagtttactcaatcggggt 60557 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 60 ||||||||||||||| |||||||||||| |||||||| || ||||| ||||| || | Sbjct: 60261 catcgtctacaacaaatacatcctcgacaagaagatgtataattggccattcccaataac 60320 Query: 61 cctcaccatggtgcacatgg 80 ||||||||| | ||||||| Sbjct: 60321 tctcaccatgatccacatgg 60340
>gb|AY054267.1| Arabidopsis thaliana At2g25520/F13B15.18 mRNA, complete cds Length = 1489 Score = 69.9 bits (35), Expect = 7e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 188 atcggcgcgctctactccctctccctctggttctccaactccgcatacatctacctctcc 247 ||||||||| | ||||| || || |||||||| || ||||| || |||||||||||||| Sbjct: 396 atcggcgcgttgtactcactttctctctggttatcaaactctgcttacatctacctctct 455 Query: 248 gtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccatcggggt 306 || |||||||| || |||||||| || || ||||| || || || ||||| |||||||| Sbjct: 456 gtttccttcattcaaatgctcaaagccctaatgcctgtagcagtttactcaatcggggt 514 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 60 ||||||||||||||| |||||||||||| |||||||| || ||||| ||||| || | Sbjct: 218 catcgtctacaacaaatacatcctcgacaagaagatgtataattggccattcccaataac 277 Query: 61 cctcaccatggtgcacatgg 80 ||||||||| | ||||||| Sbjct: 278 tctcaccatgatccacatgg 297
>gb|BT002645.1| Arabidopsis thaliana At2g25520/F13B15.18 gene, complete cds Length = 1044 Score = 69.9 bits (35), Expect = 7e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 188 atcggcgcgctctactccctctccctctggttctccaactccgcatacatctacctctcc 247 ||||||||| | ||||| || || |||||||| || ||||| || |||||||||||||| Sbjct: 274 atcggcgcgttgtactcactttctctctggttatcaaactctgcttacatctacctctct 333 Query: 248 gtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccatcggggt 306 || |||||||| || |||||||| || || ||||| || || || ||||| |||||||| Sbjct: 334 gtttccttcattcaaatgctcaaagccctaatgcctgtagcagtttactcaatcggggt 392 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctc 60 ||||||||||||||| |||||||||||| |||||||| || ||||| ||||| || | Sbjct: 96 catcgtctacaacaaatacatcctcgacaagaagatgtataattggccattcccaataac 155 Query: 61 cctcaccatggtgcacatgg 80 ||||||||| | ||||||| Sbjct: 156 tctcaccatgatccacatgg 175
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12, complete sequence Length = 179644 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| |||||| |||||||||||||||||||||| || Sbjct: 83796 atgctcaacatgctcggcatctccgcgggcgtcaccatcgccgcctacggcgaggcgcgg 83737 Query: 401 ttcgac 406 |||||| Sbjct: 83736 ttcgac 83731
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 341 atgctcaacatgctctccatctccttcggcgtcgccatcgccgcctacggcgaggcccgc 400 ||||||||||||||| ||||||| |||||| |||||||||||||||||||||| || Sbjct: 29947044 atgctcaacatgctcggcatctccgcgggcgtcaccatcgccgcctacggcgaggcgcgg 29946985 Query: 401 ttcgac 406 |||||| Sbjct: 29946984 ttcgac 29946979 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 tccttcatccagatgctcaag 271 ||||||||||||||||||||| Sbjct: 16221037 tccttcatccagatgctcaag 16221017
>dbj|AB190773.1| Mesembryanthemum crystallinum PTL1 mRNA for plastidic phosphate translocator-like protein1, complete cds Length = 1661 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 1 catcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccc 54 |||||| |||||||||||||||||||| | ||||||||||| ||||||||||| Sbjct: 274 catcgtttacaacaagtacatcctcgatcgtaagatgtacaattggcccttccc 327
>ref|NM_121161.1| Arabidopsis thaliana organic anion transporter AT5G11230 mRNA, complete cds Length = 1056 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 5 gtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctc 64 ||||||||||| |||||||||||| ||||||||||| ||||| ||||| ||||| ||| Sbjct: 100 gtctacaacaaatacatcctcgacaagaagatgtacaattggccattcccgatctcactc 159 Query: 65 accatggtgcacatggcctt 84 || ||| | |||||| |||| Sbjct: 160 acaatgatccacatgtcctt 179 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 206 ctctccctctggttctccaactccgcatacatctacctctccgtctccttcatccagatg 265 ||||| |||||||| || || ||||| ||||| ||||| || |||||||| ||||||||| Sbjct: 292 ctctcactctggttatcgaattccgcttacatttacctatcagtctcctttatccagatg 351 Query: 266 ctcaaggcgctcatgcccgtcgccgtctactccatcgg 303 || || || |||||||| || || || ||||| ||||| Sbjct: 352 cttaaagctctcatgcctgtagctgtttactcaatcgg 389
>emb|AL360314.1|ATF2I11 Arabidopsis thaliana DNA chromosome 5, BAC clone F2I11 (ESSA project) Length = 110992 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 5 gtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctc 64 ||||||||||| |||||||||||| ||||||||||| ||||| ||||| ||||| ||| Sbjct: 43422 gtctacaacaaatacatcctcgacaagaagatgtacaattggccattcccgatctcactc 43481 Query: 65 accatggtgcacatggcctt 84 || ||| | |||||| |||| Sbjct: 43482 acaatgatccacatgtcctt 43501 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 206 ctctccctctggttctccaactccgcatacatctacctctccgtctccttcatccagatg 265 ||||| |||||||| || || ||||| ||||| ||||| || |||||||| ||||||||| Sbjct: 43614 ctctcactctggttatcgaattccgcttacatttacctatcagtctcctttatccagatg 43673 Query: 266 ctcaaggcgctcatgcccgtcgccgtctactccatcgg 303 || || || |||||||| || || || ||||| ||||| Sbjct: 43674 cttaaagctctcatgcctgtagctgtttactcaatcgg 43711
>ref|XM_950751.1| Neurospora crassa OR74A hypothetical protein (NCU01456.1) partial mRNA Length = 1257 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 237 tctacctctccgtctccttcatccagatgctcaaggc 273 |||||||| |||| |||||||||||||||||||||| Sbjct: 335 tctacctcagcgtcgccttcatccagatgctcaaggc 371
>ref|XM_327894.1| Neurospora crassa OR74A hypothetical protein (NCU01456.1) partial mRNA Length = 1257 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 237 tctacctctccgtctccttcatccagatgctcaaggc 273 |||||||| |||| |||||||||||||||||||||| Sbjct: 335 tctacctcagcgtcgccttcatccagatgctcaaggc 371
>emb|BX294022.1|NCB11C21 Neurospora crassa DNA linkage group V BAC clone B11C21 Length = 62209 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 237 tctacctctccgtctccttcatccagatgctcaaggc 273 |||||||| |||| |||||||||||||||||||||| Sbjct: 30990 tctacctcagcgtcgccttcatccagatgctcaaggc 31026
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 111 tccgcgtcttccgcgtcgtcgac 133 ||||||||||||||||||||||| Sbjct: 2590007 tccgcgtcttccgcgtcgtcgac 2590029
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 111 tccgcgtcttccgcgtcgtcgac 133 ||||||||||||||||||||||| Sbjct: 770049 tccgcgtcttccgcgtcgtcgac 770071
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 111 tccgcgtcttccgcgtcgtcgac 133 ||||||||||||||||||||||| Sbjct: 500832 tccgcgtcttccgcgtcgtcgac 500854
>gb|AC155895.2| Medicago truncatula chromosome 2 BAC clone mth2-82i6, complete sequence Length = 131083 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 345 tcaacatgctctccatctccttc 367 ||||||||||||||||||||||| Sbjct: 5725 tcaacatgctctccatctccttc 5703
>ref|XM_742045.1| Aspergillus fumigatus Af293 integral membrane protein (Afu8g00670) partial mRNA Length = 765 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 249 tctccttcatccagatgctcaaggcg 274 ||||||| |||||||||||||||||| Sbjct: 326 tctcctttatccagatgctcaaggcg 351
>ref|XM_370101.1| Magnaporthe grisea 70-15 hypothetical protein (MG06616.4) partial mRNA Length = 1833 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 ggcgtcgccatcgccgcctac 388 ||||||||||||||||||||| Sbjct: 565 ggcgtcgccatcgccgcctac 585
>gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940128D9, complete sequence Length = 128585 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 gccgcctacggcgaggcccgc 400 ||||||||||||||||||||| Sbjct: 85488 gccgcctacggcgaggcccgc 85508
>ref|XM_754251.1| Ustilago maydis 521 hypothetical protein (UM03197.1) partial mRNA Length = 1056 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cttcatccagatgctcaaggc 273 ||||||||||||||||||||| Sbjct: 471 cttcatccagatgctcaaggc 491
>ref|XM_386174.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05998.1) partial mRNA Length = 1230 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 237 tctacctctccgtctccttcatccagatgctcaaggc 273 |||||||||| ||| | ||||| |||||||||||||| Sbjct: 404 tctacctctcggtcgctttcattcagatgctcaaggc 440
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 ctgctcctccctcgccgtcgc 105 ||||||||||||||||||||| Sbjct: 17742940 ctgctcctccctcgccgtcgc 17742920
>gb|AF293449.1|AF293449 Canis familiaris BPAG1-like gene sequence Length = 8190 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 200 tactccctctccctctggttctccaactc 228 ||||||||| |||||||||||||| |||| Sbjct: 1135 tactccctcgccctctggttctcccactc 1107
>dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0676H02 Length = 144252 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 ctgctcctccctcgccgtcgc 105 ||||||||||||||||||||| Sbjct: 51574 ctgctcctccctcgccgtcgc 51554
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 acggcgaggcccgcttcgacc 407 ||||||||||||||||||||| Sbjct: 3680254 acggcgaggcccgcttcgacc 3680234
>emb|AL606729.3|OSJN00107 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062B06, complete sequence Length = 187154 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 tccttcatccagatgctcaag 271 ||||||||||||||||||||| Sbjct: 65952 tccttcatccagatgctcaag 65932
>ref|NM_187697.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1050 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 catcgccgcctacggcgagg 395 |||||||||||||||||||| Sbjct: 816 catcgccgcctacggcgagg 835
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 acctctccgtctccttcatc 259 |||||||||||||||||||| Sbjct: 968203 acctctccgtctccttcatc 968222
>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete sequence Length = 906719 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 352 gctctccatctccttcggcgtcgccatcgccg 383 ||||||||| ||| ||| |||||||||||||| Sbjct: 704833 gctctccatttccatcgtcgtcgccatcgccg 704802
>ref|XM_362482.1| Magnaporthe grisea 70-15 hypothetical protein (MG08065.4) partial mRNA Length = 1455 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 ccgccatgaccacgcagctc 166 |||||||||||||||||||| Sbjct: 1085 ccgccatgaccacgcagctc 1066
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cttccccatctccctcacca 68 |||||||||||||||||||| Sbjct: 877221 cttccccatctccctcacca 877240
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 tcgcccgccatgaccacgca 162 |||||||||||||||||||| Sbjct: 1629394 tcgcccgccatgaccacgca 1629413
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 ccgcgtcttccgcgtcgtcgacct 135 |||||||||||||| ||||||||| Sbjct: 1214093 ccgcgtcttccgcgccgtcgacct 1214070
>gb|AY491969.1| Triticum aestivum glutamine synthetase isoform GSr2 (GS) gene, complete cds Length = 1341 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 catcgccgcctacggcgagg 395 |||||||||||||||||||| Sbjct: 867 catcgccgcctacggcgagg 886
>gb|AY491968.1| Triticum aestivum glutamine synthetase isoform GSr1 (GS) gene, complete cds Length = 1397 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 catcgccgcctacggcgagg 395 |||||||||||||||||||| Sbjct: 917 catcgccgcctacggcgagg 936
>ref|XM_843094.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0492) partial mRNA Length = 2160 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 acctctccgtctccttcatc 259 |||||||||||||||||||| Sbjct: 1702 acctctccgtctccttcatc 1683
>ref|XM_568143.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNL06150) partial mRNA Length = 2846 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 352 gctctccatctccttcggcgtcgccatcgccg 383 ||||||||| ||| ||| |||||||||||||| Sbjct: 2219 gctctccatttccatcgtcgtcgccatcgccg 2188
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 atcgccgcctacggcgaggcccgc 400 ||||||||||||||||||| |||| Sbjct: 115922 atcgccgcctacggcgagggccgc 115899
>emb|CR812477.10| Human DNA sequence from clone XXyac-25IG7 on chromosome 1, complete sequence Length = 31273 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 ccttccccatctccctcaccatgg 71 ||||||||||||||||| |||||| Sbjct: 28117 ccttccccatctccctcgccatgg 28140
>emb|AL672032.6| Human DNA sequence from clone RP11-308B5 on chromosome X Contains a novel gene, the 5' end of the PLAC1 gene for placenta-specific 1, a ribosomal protein L21 (RPL21) pseudogene, a ribosomal protein S7 (RPS7) pseudogene and the 3' end of the LOC169090 gene, complete sequence Length = 209317 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 cacatggccttctgctcctccctc 97 |||||||||||||||| ||||||| Sbjct: 170868 cacatggccttctgcttctccctc 170845
>gb|AY597275.1| Pseudomonas viridiflava strain ME3.1b pathogenicity island PAI-Region-1, complete sequence Length = 40359 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 ccagatgctcaaggcgctca 278 |||||||||||||||||||| Sbjct: 15407 ccagatgctcaaggcgctca 15388
>ref|XM_504157.1| Yarrowia lipolytica CLIB122, YALI0E19679g predicted mRNA Length = 1278 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 ctcgtccgcgtcttccgcgtcgtc 130 |||||||||||| ||||||||||| Sbjct: 144 ctcgtccgcgtcgtccgcgtcgtc 167
>emb|AL020993.1|HS5O6 Human DNA sequence from clone RP1-5O6 on chromosome 22q12, complete sequence Length = 106008 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 cctctccgtctccttcatcc 260 |||||||||||||||||||| Sbjct: 3572 cctctccgtctccttcatcc 3553
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tcgccgcctacggcgaggcc 397 |||||||||||||||||||| Sbjct: 616029 tcgccgcctacggcgaggcc 616048
>emb|X14244.1|OSRIGS8 Oryza sativa root GS1 mRNA for cytosolic glutamine synthetase (EC 6.3.1.2) (clone lambda-GS8) Length = 1169 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 catcgccgcctacggcgagg 395 |||||||||||||||||||| Sbjct: 898 catcgccgcctacggcgagg 917
>gb|DQ124211.1| Triticum aestivum glutamine synthetase isoform GS1c (GS1) mRNA, complete cds Length = 1223 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 catcgccgcctacggcgagg 395 |||||||||||||||||||| Sbjct: 840 catcgccgcctacggcgagg 859
>gb|DQ124210.1| Triticum aestivum glutamine synthetase isoform GS1b (GS1) mRNA, complete cds Length = 1496 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 catcgccgcctacggcgagg 395 |||||||||||||||||||| Sbjct: 915 catcgccgcctacggcgagg 934
>gb|DQ124209.1| Triticum aestivum glutamine synthetase isoform GS1a (GS1) mRNA, complete cds Length = 1292 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 catcgccgcctacggcgagg 395 |||||||||||||||||||| Sbjct: 903 catcgccgcctacggcgagg 922
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09, complete sequence Length = 146568 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 catcgccgcctacggcgagg 395 |||||||||||||||||||| Sbjct: 106946 catcgccgcctacggcgagg 106927
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 tcggcgtcgccatcgccgcc 385 |||||||||||||||||||| Sbjct: 30706 tcggcgtcgccatcgccgcc 30687
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 ccttcggcgtcgccatcgccgcct 386 ||||||||||||||| |||||||| Sbjct: 3852808 ccttcggcgtcgccaccgccgcct 3852785
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 ctgctcctccctcgccgtcg 104 |||||||||||||||||||| Sbjct: 977598 ctgctcctccctcgccgtcg 977579
>gb|AY026073.1| Monosiga brevicollis elongation factor 1 alpha long form mRNA, complete cds, alternatively spliced Length = 1522 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 gccgcctacggcgaggcccgcttc 403 |||| ||||||||||||||||||| Sbjct: 515 gccggctacggcgaggcccgcttc 538
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 cggcgtcgccatcgccgcct 386 |||||||||||||||||||| Sbjct: 18549634 cggcgtcgccatcgccgcct 18549653
>dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete genome Length = 351911 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 gccatgaccacgcagctcta 168 |||||||||||||||||||| Sbjct: 267180 gccatgaccacgcagctcta 267199
>gb|AE004590.1| Pseudomonas aeruginosa PAO1, section 151 of 529 of the complete genome Length = 11426 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 tcggcgtcgccatcgccgcc 385 |||||||||||||||||||| Sbjct: 4675 tcggcgtcgccatcgccgcc 4656
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 cgccatcgccgcctacggcg 392 |||||||||||||||||||| Sbjct: 2451363 cgccatcgccgcctacggcg 2451382
>dbj|AB180688.1| Oryza sativa (japonica cultivar-group) OsGS1;2 mRNA for cytosolic glutamine synthetase 1;2, complete cds Length = 2005 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 catcgccgcctacggcgagg 395 |||||||||||||||||||| Sbjct: 1496 catcgccgcctacggcgagg 1515
>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0005E02 Length = 89380 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 cggcgtcgccatcgccgcct 386 |||||||||||||||||||| Sbjct: 2176 cggcgtcgccatcgccgcct 2195
>dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1457_D07 Length = 103688 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 cggcgtcgccatcgccgcct 386 |||||||||||||||||||| Sbjct: 78390 cggcgtcgccatcgccgcct 78409
>dbj|AK119387.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-C03, full insert sequence Length = 2864 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 cggcgtcgccatcgccgcct 386 |||||||||||||||||||| Sbjct: 194 cggcgtcgccatcgccgcct 175
>gb|U46207.1|CRU46207 Chlamydomonas reinhardtii cytosolic glutamine synthetase (GS1) mRNA, complete cds Length = 2030 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 catcgccgcctacggcgagg 395 |||||||||||||||||||| Sbjct: 1007 catcgccgcctacggcgagg 1026
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 ctcgccgtcgcgctcgtccg 114 |||||||||||||||||||| Sbjct: 2348893 ctcgccgtcgcgctcgtccg 2348912
>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0078P24, from chromosome 3, complete sequence Length = 146930 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 271 ggcgctcatgcccgtcgccgtctactcc 298 |||||| ||||| ||||||||||||||| Sbjct: 83954 ggcgcttatgcctgtcgccgtctactcc 83927
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 ctcgtccgcgtcttccgcgtcgtc 130 |||||||||||| ||||||||||| Sbjct: 2348145 ctcgtccgcgtcgtccgcgtcgtc 2348168 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,485,387 Number of Sequences: 3902068 Number of extensions: 3485387 Number of successful extensions: 167085 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 164288 Number of HSP's gapped (non-prelim): 2797 length of query: 434 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 412 effective length of database: 17,147,199,772 effective search space: 7064646306064 effective search space used: 7064646306064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
