>PPIH_HUMAN (O43447) Peptidyl-prolyl cis-trans isomerase H (EC 5.2.1.8) (PPIase|
           H) (Rotamase H) (U-snRNP-associated cyclophilin
           SnuCyp-20) (USA-CYP) (Small nuclear ribonucleoprotein
           particle-specific cyclophilin H) (CypH)
          Length = 177

 Score = 40.8 bits (94), Expect = 9e-04
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +1

Query: 1   NVATGPNNRPKLACVISECGEM 66
           NV TGPNN+PKL  VIS+CGEM
Sbjct: 156 NVPTGPNNKPKLPVVISQCGEM 177

>PPIH_CRYNE (Q5KA96) Peptidyl-prolyl cis-trans isomerase H (EC 5.2.1.8) (PPIase|
           H) (Rotamase H)
          Length = 179

 Score = 36.2 bits (82), Expect = 0.021
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = +1

Query: 1   NVATGPNNRPKLACVISECGEM 66
           NV TG NNRPKL   I+ECGEM
Sbjct: 158 NVPTGANNRPKLQVRIAECGEM 179

>PPIH_USTMA (Q4P6X6) Peptidyl-prolyl cis-trans isomerase H (EC 5.2.1.8) (PPIase|
           H) (Rotamase H) (Fragment)
          Length = 156

 Score = 36.2 bits (82), Expect = 0.021
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +1

Query: 1   NVATGPNNRPKLACVISECGEM 66
           NV TG NNRPK+A  I++CGEM
Sbjct: 135 NVPTGANNRPKMAVRITQCGEM 156

>CYP11_CAEEL (P52018) Peptidyl-prolyl cis-trans isomerase 11 (EC 5.2.1.8)|
           (PPIase) (Rotamase) (Cyclophilin-11)
          Length = 183

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +1

Query: 1   NVATGPNNRPKLACVISECGEM 66
           NV TG NN+PKL  V+ +CG++
Sbjct: 162 NVPTGANNKPKLPIVVVQCGQL 183

>V30K_HCMVE (P06724) 30 kDa major early protein|
          Length = 254

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 140 DWRLRALLH*STYCDFVSMRNLDSDKLAT-CLCM 238
           D R R +++ S YC+FVS+    + +L T C+C+
Sbjct: 55  DHRGRGVIYYSYYCNFVSLNLFRAARLTTPCICL 88


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,039,875
Number of Sequences: 219361
Number of extensions: 760250
Number of successful extensions: 1621
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1621
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)