ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast79f04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK067243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099C01, full insert sequence Length = 3592 Score = 107 bits (54), Expect = 3e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 358 gcagtttacgcgggaagaggtgcggttcgtcaaggacgcggggcccgcgatcgcgccggt 417 ||||| ||||||||| ||| |||||||||| ||||||||||||||| ||||| ||||||| Sbjct: 350 gcagtgtacgcgggaggagatgcggttcgtgaaggacgcggggccctcgatcacgccggt 409 Query: 418 gtcgtacccgagcagggttgcgccgcttccgggagaccgtcc 459 |||||||||| |||||| |||||||| |||| |||||||| Sbjct: 410 gtcgtacccggccagggtcgcgccgctgccggaggaccgtcc 451 Score = 73.8 bits (37), Expect = 4e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 219 cgccgccgcccatcaagcccgtctcctacgccccgaagccgaaggccccacccgaggagg 278 |||||||||||||||||||||| |||||||||||||||||| || | | |||||||||| Sbjct: 196 cgccgccgcccatcaagcccgtgtcctacgccccgaagccgcagccagcgcccgaggagg 255 Query: 279 c 279 | Sbjct: 256 c 256 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%), Gaps = 5/65 (7%) Strand = Plus / Plus Query: 88 cgccgccggccgccgccacgccc-----tcacgatggctcacctccgcctcctcctttcc 142 ||||||||||||||||||| ||| || | ||||||||||||||||||||||| ||| Sbjct: 45 cgccgccggccgccgccactccccgccatcgccatggctcacctccgcctcctcctctcc 104 Query: 143 cactc 147 ||||| Sbjct: 105 cactc 109
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 101 bits (51), Expect = 2e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 365 acgcgggaagaggtgcggttcgtcaaggacgcggggcccgcgatcgcgccggtgtcgtac 424 |||||||| ||| |||||||||| ||||||||||||||| ||||| |||||||||||||| Sbjct: 20319007 acgcgggaggagatgcggttcgtgaaggacgcggggccctcgatcacgccggtgtcgtac 20319066 Query: 425 ccgagcagggttgcgccgcttccgggagaccgtcc 459 ||| |||||| |||||||| |||| |||||||| Sbjct: 20319067 ccggccagggtcgcgccgctgccggaggaccgtcc 20319101 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 219 cgccgccgcccatcaagcccgtctcctacgccccgaagccg 259 |||||||||||||||||||||| |||||||||||||||||| Sbjct: 20318846 cgccgccgcccatcaagcccgtgtcctacgccccgaagccg 20318886 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%), Gaps = 5/65 (7%) Strand = Plus / Plus Query: 88 cgccgccggccgccgccacgccc-----tcacgatggctcacctccgcctcctcctttcc 142 ||||||||||||||||||| ||| || | ||||||||||||||||||||||| ||| Sbjct: 20318695 cgccgccggccgccgccactccccgccatcgccatggctcacctccgcctcctcctctcc 20318754 Query: 143 cactc 147 ||||| Sbjct: 20318755 cactc 20318759 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 ccctcgccgccggccgccgcc 104 ||||||||||||||||||||| Sbjct: 29816688 ccctcgccgccggccgccgcc 29816708 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ccctcgccgccggccgccgc 103 |||||||||||||||||||| Sbjct: 24650980 ccctcgccgccggccgccgc 24650961
>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016D02 Length = 157822 Score = 101 bits (51), Expect = 2e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 365 acgcgggaagaggtgcggttcgtcaaggacgcggggcccgcgatcgcgccggtgtcgtac 424 |||||||| ||| |||||||||| ||||||||||||||| ||||| |||||||||||||| Sbjct: 42402 acgcgggaggagatgcggttcgtgaaggacgcggggccctcgatcacgccggtgtcgtac 42461 Query: 425 ccgagcagggttgcgccgcttccgggagaccgtcc 459 ||| |||||| |||||||| |||| |||||||| Sbjct: 42462 ccggccagggtcgcgccgctgccggaggaccgtcc 42496 Score = 73.8 bits (37), Expect = 4e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 219 cgccgccgcccatcaagcccgtctcctacgccccgaagccg 259 |||||||||||||||||||||| |||||||||||||||||| Sbjct: 42241 cgccgccgcccatcaagcccgtgtcctacgccccgaagccg 42281 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%), Gaps = 5/65 (7%) Strand = Plus / Plus Query: 88 cgccgccggccgccgccacgccc-----tcacgatggctcacctccgcctcctcctttcc 142 ||||||||||||||||||| ||| || | ||||||||||||||||||||||| ||| Sbjct: 42090 cgccgccggccgccgccactccccgccatcgccatggctcacctccgcctcctcctctcc 42149 Query: 143 cactc 147 ||||| Sbjct: 42150 cactc 42154
>gb|AC135598.4| Oryza sativa chromosome 3 BAC OSJNBb0021K20 genomic sequence, complete sequence Length = 137220 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 365 acgcgggaagaggtgcggttcgtcaaggacgcggggcccgcgatcgcgccggtgtcgtac 424 |||||||| ||| |||||||||| ||||| ||||||||| ||||| | |||||||||||| Sbjct: 16382 acgcgggaggagatgcggttcgtgaaggatgcggggccctcgatcacaccggtgtcgtac 16323 Query: 425 ccgagcagggttgcgccgcttccgg 449 ||| |||||| |||||||| |||| Sbjct: 16322 ccggccagggtcgcgccgctgccgg 16298 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 219 cgccgccgcccatcaagcccgtctcctacgccccgaagccg 259 |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 16544 cgccgccgcccatcaagcccgtgtcctacgtgccgaagccg 16504 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 116 atggctcacctccgcctcctcctttcccactc 147 ||||||||||||||||||||||| |||||||| Sbjct: 16656 atggctcacctccgcctcctcctctcccactc 16625
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 365 acgcgggaagaggtgcggttcgtcaaggacgcggggcccgcgatcgcgccggtgtcgtac 424 |||||||| ||| |||||||||| ||||| ||||||||| ||||| | |||||||||||| Sbjct: 17294005 acgcgggaggagatgcggttcgtgaaggatgcggggccctcgatcacaccggtgtcgtac 17293946 Query: 425 ccgagcagggttgcgccgcttccgg 449 ||| |||||| |||||||| |||| Sbjct: 17293945 ccggccagggtcgcgccgctgccgg 17293921 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 219 cgccgccgcccatcaagcccgtctcctacgccccgaagccg 259 |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 17294167 cgccgccgcccatcaagcccgtgtcctacgtgccgaagccg 17294127 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 116 atggctcacctccgcctcctcctttcccactc 147 ||||||||||||||||||||||| |||||||| Sbjct: 17294279 atggctcacctccgcctcctcctctcccactc 17294248 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 86 ctcgccgccggccgccgccacgccctc 112 ||||||||||||||||||| ||||||| Sbjct: 35558948 ctcgccgccggccgccgccgcgccctc 35558922 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 219 cgccgccgcccatcaagcccgtctcctac 247 |||||||||||||||||||| | |||||| Sbjct: 15993504 cgccgccgcccatcaagcccttgtcctac 15993532 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 9230256 tcgccgccggccgccgccac 9230275 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 4240111 tcgccgccggccgccgccac 4240092
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 365 acgcgggaagaggtgcggttcgtcaaggacgcggggcccgcgatcgcgccggtgtcgtac 424 |||||||| ||| |||||||||| ||||| ||||||||| ||||| | |||||||||||| Sbjct: 17287546 acgcgggaggagatgcggttcgtgaaggatgcggggccctcgatcacaccggtgtcgtac 17287487 Query: 425 ccgagcagggttgcgccgcttccgg 449 ||| |||||| |||||||| |||| Sbjct: 17287486 ccggccagggtcgcgccgctgccgg 17287462 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 219 cgccgccgcccatcaagcccgtctcctacgccccgaagccg 259 |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 17287708 cgccgccgcccatcaagcccgtgtcctacgtgccgaagccg 17287668 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 116 atggctcacctccgcctcctcctttcccactc 147 ||||||||||||||||||||||| |||||||| Sbjct: 17287820 atggctcacctccgcctcctcctctcccactc 17287789 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 86 ctcgccgccggccgccgccacgccctc 112 ||||||||||||||||||| ||||||| Sbjct: 35649020 ctcgccgccggccgccgccgcgccctc 35648994 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 219 cgccgccgcccatcaagcccgtctcctac 247 |||||||||||||||||||| | |||||| Sbjct: 15988038 cgccgccgcccatcaagcccttgtcctac 15988066 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 9228089 tcgccgccggccgccgccac 9228108 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 4240226 tcgccgccggccgccgccac 4240207
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 116 atggctcacctccgcctcctcctttcccactc 147 ||||||||||||||||||||||| |||||||| Sbjct: 3623369 atggctcacctccgcctcctcctctcccactc 3623400 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 ccctcgccgccggccgccgcc 104 ||||||||||||||||||||| Sbjct: 21223614 ccctcgccgccggccgccgcc 21223634 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 19381888 cctcgccgccggccgccgcc 19381907 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 18297383 cctcgccgccggccgccgcc 18297364 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 13999557 tcgccgccggccgccgccac 13999576 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ccctcgccgccggccgccgc 103 |||||||||||||||||||| Sbjct: 398317 ccctcgccgccggccgccgc 398336
>dbj|AP005587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0499G10 Length = 158375 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 116 atggctcacctccgcctcctcctttcccactc 147 ||||||||||||||||||||||| |||||||| Sbjct: 109144 atggctcacctccgcctcctcctctcccactc 109175
>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1695_A02 Length = 156214 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 116 atggctcacctccgcctcctcctttcccactc 147 ||||||||||||||||||||||| |||||||| Sbjct: 31630 atggctcacctccgcctcctcctctcccactc 31661
>ref|XM_467694.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1719 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 78 ccgcacccctcgccgccggccgccgcc 104 |||||||||||||||||| |||||||| Sbjct: 487 ccgcacccctcgccgccgtccgccgcc 461
>ref|XM_470424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1369 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 86 ctcgccgccggccgccgccacgccctc 112 ||||||||||||||||||| ||||||| Sbjct: 630 ctcgccgccggccgccgccgcgccctc 604
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 78 ccgcacccctcgccgccggccgccgcc 104 |||||||||||||||||| |||||||| Sbjct: 30919307 ccgcacccctcgccgccgtccgccgcc 30919333 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 aaaccccacgccgcacccctcgcc 91 ||||||| |||||||||||||||| Sbjct: 24965168 aaaccccccgccgcacccctcgcc 24965145
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 86 ctcgccgccggccgccgccacgccctc 112 ||||||||||||||||||| ||||||| Sbjct: 91911 ctcgccgccggccgccgccgcgccctc 91885
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 78 ccgcacccctcgccgccggccgccgcc 104 |||||||||||||||||| |||||||| Sbjct: 102884 ccgcacccctcgccgccgtccgccgcc 102910
>dbj|AK070652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063C09, full insert sequence Length = 1719 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 78 ccgcacccctcgccgccggccgccgcc 104 |||||||||||||||||| |||||||| Sbjct: 487 ccgcacccctcgccgccgtccgccgcc 461
>dbj|AK068082.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130D01, full insert sequence Length = 1360 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 86 ctcgccgccggccgccgccacgccctc 112 ||||||||||||||||||| ||||||| Sbjct: 669 ctcgccgccggccgccgccgcgccctc 643
>gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence Length = 282600 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 82 acccctcgccgccggccgccgcc 104 ||||||||||||||||||||||| Sbjct: 28650 acccctcgccgccggccgccgcc 28672
>gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence Length = 339089 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 82 acccctcgccgccggccgccgcc 104 ||||||||||||||||||||||| Sbjct: 1195 acccctcgccgccggccgccgcc 1217
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 tcgccgccggccgccgccacgc 108 |||||||||||||||||||||| Sbjct: 2445404 tcgccgccggccgccgccacgc 2445425
>ref|XM_483371.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1601 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ctcgccgccggccgccgccac 106 ||||||||||||||||||||| Sbjct: 573 ctcgccgccggccgccgccac 593
>ref|XM_450196.1| Oryza sativa (japonica cultivar-group), mRNA Length = 804 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ccctcgccgccggccgccgcc 104 ||||||||||||||||||||| Sbjct: 560 ccctcgccgccggccgccgcc 540
>ref|XM_470887.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1113 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 219 cgccgccgcccatcaagcccgtctcctac 247 |||||||||||||||||||| | |||||| Sbjct: 278 cgccgccgcccatcaagcccttgtcctac 250
>gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0087G11, complete sequence Length = 169728 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 219 cgccgccgcccatcaagcccgtctcctac 247 |||||||||||||||||||| | |||||| Sbjct: 56913 cgccgccgcccatcaagcccttgtcctac 56885
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence Length = 159632 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ccctcgccgccggccgccgcc 104 ||||||||||||||||||||| Sbjct: 51673 ccctcgccgccggccgccgcc 51653
>ref|XM_424570.1| PREDICTED: Gallus gallus similar to 2310047H23Rik protein (LOC426960), mRNA Length = 784 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 76 cgccgcacccctcgccgccggccgccgcc 104 |||||||| |||| ||||||||||||||| Sbjct: 283 cgccgcactcctctccgccggccgccgcc 255
>ref|XM_414627.1| PREDICTED: Gallus gallus similar to 2310047H23Rik protein (LOC416310), mRNA Length = 1125 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 76 cgccgcacccctcgccgccggccgccgcc 104 |||||||| |||| ||||||||||||||| Sbjct: 283 cgccgcactcctctccgccggccgccgcc 255
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 gccgccggccgccgccacgcc 109 ||||||||||||||||||||| Sbjct: 223591 gccgccggccgccgccacgcc 223611
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14 Length = 348251 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 gccgccggccgccgccacgcc 109 ||||||||||||||||||||| Sbjct: 226984 gccgccggccgccgccacgcc 227004
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ccctcgccgccggccgccgcc 104 ||||||||||||||||||||| Sbjct: 2771866 ccctcgccgccggccgccgcc 2771846 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ctcgccgccggccgccgcca 105 |||||||||||||||||||| Sbjct: 7077611 ctcgccgccggccgccgcca 7077630 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 ctccggcaaccccccgccgccgcc 228 ||||||||| |||||||||||||| Sbjct: 3637177 ctccggcaaacccccgccgccgcc 3637200
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ctcgccgccggccgccgccac 106 ||||||||||||||||||||| Sbjct: 25882824 ctcgccgccggccgccgccac 25882844 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 27588862 tcgccgccggccgccgccac 27588881 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 27588747 tcgccgccggccgccgccac 27588766 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 24256126 cctcgccgccggccgccgcc 24256145
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 401 cccgcgatcgcgccggtgtcg 421 ||||||||||||||||||||| Sbjct: 1412631 cccgcgatcgcgccggtgtcg 1412611
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 ccctcgccgccggccgccgcc 104 ||||||||||||||||||||| Sbjct: 12201 ccctcgccgccggccgccgcc 12221
>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1003_A09 Length = 150755 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ctcgccgccggccgccgccac 106 ||||||||||||||||||||| Sbjct: 68611 ctcgccgccggccgccgccac 68631
>dbj|AK120059.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E13, full insert sequence Length = 2345 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ccctcgccgccggccgccgcc 104 ||||||||||||||||||||| Sbjct: 49 ccctcgccgccggccgccgcc 29
>dbj|AK119628.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-128-A01, full insert sequence Length = 1545 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 ccctcgccgccggccgccgcc 104 ||||||||||||||||||||| Sbjct: 109 ccctcgccgccggccgccgcc 129
>dbj|AK100047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154C19, full insert sequence Length = 1796 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 ccctcgccgccggccgccgcc 104 ||||||||||||||||||||| Sbjct: 111 ccctcgccgccggccgccgcc 131
>dbj|AK060548.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-H04, full insert sequence Length = 1601 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ctcgccgccggccgccgccac 106 ||||||||||||||||||||| Sbjct: 573 ctcgccgccggccgccgccac 593
>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0705E11 Length = 140729 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 ccctcgccgccggccgccgcc 104 ||||||||||||||||||||| Sbjct: 94371 ccctcgccgccggccgccgcc 94391
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ccctcgccgccggccgccgcc 104 ||||||||||||||||||||| Sbjct: 2780897 ccctcgccgccggccgccgcc 2780877 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ctcgccgccggccgccgcca 105 |||||||||||||||||||| Sbjct: 7143582 ctcgccgccggccgccgcca 7143601 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 ctccggcaaccccccgccgccgcc 228 ||||||||| |||||||||||||| Sbjct: 3645881 ctccggcaaacccccgccgccgcc 3645904
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 101114 cctcgccgccggccgccgcc 101133
>ref|NM_188414.1| Oryza sativa (japonica cultivar-group), Ozsa8140 predicted mRNA Length = 2007 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 179 cctcgccgccggccgccgcc 198
>gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence Length = 151656 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctccaactccggcaacccc 217 |||||||||||||||||||| Sbjct: 37219 cctccaactccggcaacccc 37200
>ref|XM_526928.1| PREDICTED: Pan troglodytes integrin alpha 2 (LOC471550), mRNA Length = 3000 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 gccatccacatccccaccgcctcc 176 ||||||| |||||||||||||||| Sbjct: 267 gccatccccatccccaccgcctcc 290
>gb|BT017130.1| Zea mays clone EL01N0365F01.c mRNA sequence Length = 736 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ctcgccgccggccgccgcca 105 |||||||||||||||||||| Sbjct: 48 ctcgccgccggccgccgcca 29
>ref|XM_479312.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1155 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 45 cctcgccgccggccgccgcc 26
>ref|XM_479023.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1806 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 31 cctcgccgccggccgccgcc 50
>ref|NM_186507.1| Oryza sativa (japonica cultivar-group), mRNA Length = 426 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 235 tcgccgccggccgccgccac 216
>ref|XM_476903.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2405 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ccctcgccgccggccgccgc 103 |||||||||||||||||||| Sbjct: 960 ccctcgccgccggccgccgc 941
>ref|XM_473171.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1056 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gctcacctccgcctcctcct 138 |||||||||||||||||||| Sbjct: 174 gctcacctccgcctcctcct 155
>gb|BT016776.1| Zea mays clone Contig609 mRNA sequence Length = 1943 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ccctcgccgccggccgccgc 103 |||||||||||||||||||| Sbjct: 1037 ccctcgccgccggccgccgc 1018
>gb|AC136519.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007C23, complete sequence Length = 173764 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctccaactccggcaacccc 217 |||||||||||||||||||| Sbjct: 137203 cctccaactccggcaacccc 137184
>gb|AY022697.1| Oryza sativa microsatellite MRG5022 containing (CCG)X8, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 201 ccaactccggcaaccccccgccgccgcc 228 ||||||||||| || ||||||||||||| Sbjct: 84 ccaactccggctactccccgccgccgcc 111
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09 map S1559, complete sequence Length = 190721 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 ctccggcaaccccccgccgccgcc 228 ||||||||| |||||||||||||| Sbjct: 4849 ctccggcaaacccccgccgccgcc 4872
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ctcgccgccggccgccgcca 105 |||||||||||||||||||| Sbjct: 104944 ctcgccgccggccgccgcca 104925
>gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055G24 map S20116S, complete sequence Length = 174210 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 ctccggcaaccccccgccgccgcc 228 ||||||||| |||||||||||||| Sbjct: 154314 ctccggcaaacccccgccgccgcc 154337
>ref|XM_615341.2| PREDICTED: Bos taurus similar to dystonin isoform a (LOC535297), mRNA Length = 23670 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 ccagcagccgccgcggcagt 362 |||||||||||||||||||| Sbjct: 22466 ccagcagccgccgcggcagt 22485
>ref|XM_752060.1| Ustilago maydis 521 hypothetical protein (UM01006.1) partial mRNA Length = 795 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 ccgcacccctcgccgccggc 97 |||||||||||||||||||| Sbjct: 145 ccgcacccctcgccgccggc 164
>emb|AL714022.6| Human DNA sequence from clone RP11-91I11 on chromosome 1 Contains a ribosomal protein L39 (RPL39) pseudogene, complete sequence Length = 63059 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ctcccatttcagtccatctc 50 |||||||||||||||||||| Sbjct: 32817 ctcccatttcagtccatctc 32798
>emb|AL354826.6| Human DNA sequence from clone RP11-286M16 on chromosome 1 Contains a novel gene, complete sequence Length = 203279 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 agaggaaaccctcccatttc 40 |||||||||||||||||||| Sbjct: 193352 agaggaaaccctcccatttc 193371
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cgccgccggccgccgccacgccct 111 |||||||| ||||||||||||||| Sbjct: 84473 cgccgccgcccgccgccacgccct 84496
>emb|AL807374.1|NCB13H18 Neurospora crassa DNA linkage group V BAC contig B13H18 Length = 122576 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 catctcccttcgcttcctcactta 68 |||||||||| ||||||||||||| Sbjct: 57711 catctcccttagcttcctcactta 57688
>emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0070J16, complete sequence Length = 130718 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gctcacctccgcctcctcct 138 |||||||||||||||||||| Sbjct: 98264 gctcacctccgcctcctcct 98245
>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete sequence Length = 151991 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 ctcgccgccggccgccgccacgcc 109 ||||||||||||||||||| |||| Sbjct: 56462 ctcgccgccggccgccgccgcgcc 56439
>gb|AF512556.1| Homo sapiens integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) (ITGA2) gene, complete cds Length = 105904 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 gccatccacatccccaccgcctcc 176 ||||||| |||||||||||||||| Sbjct: 2015 gccatccccatccccaccgcctcc 2038
>dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence Length = 271577 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ccctcgccgccggccgccgccacg 107 |||||||||||| ||||||||||| Sbjct: 152614 ccctcgccgccgcccgccgccacg 152637
>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032O19, from chromosome 3, complete sequence Length = 142248 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 56135 tcgccgccggccgccgccac 56116
>gb|AC008966.9| Homo sapiens chromosome 5 clone CTD-2366F13, complete sequence Length = 174831 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 gccatccacatccccaccgcctcc 176 ||||||| |||||||||||||||| Sbjct: 153854 gccatccccatccccaccgcctcc 153831
>gb|AC008973.6| Homo sapiens chromosome 5 clone CTD-2380L12, complete sequence Length = 117032 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 gccatccacatccccaccgcctcc 176 ||||||| |||||||||||||||| Sbjct: 100960 gccatccccatccccaccgcctcc 100937
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 1453757 cctcgccgccggccgccgcc 1453738
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gcccgcgatcgcgccggtgt 419 |||||||||||||||||||| Sbjct: 3592176 gcccgcgatcgcgccggtgt 3592195
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gctcacctccgcctcctcct 138 |||||||||||||||||||| Sbjct: 25718537 gctcacctccgcctcctcct 25718518 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ctcgccgccggccgccgcca 105 |||||||||||||||||||| Sbjct: 17468043 ctcgccgccggccgccgcca 17468024
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 25997659 cctcgccgccggccgccgcc 25997678 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 25349251 cctcgccgccggccgccgcc 25349232 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 201 ccaactccggcaaccccccgccgccgcc 228 ||||||||||| || ||||||||||||| Sbjct: 19958665 ccaactccggctactccccgccgccgcc 19958638 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 2886006 tcgccgccggccgccgccac 2885987
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 ctcgccgccggccgccgccacgcc 109 ||||||||||||||||||| |||| Sbjct: 19022202 ctcgccgccggccgccgccgcgcc 19022225
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 26725053 cctcgccgccggccgccgcc 26725072 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 24368705 cctcgccgccggccgccgcc 24368686 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 6293590 tcgccgccggccgccgccac 6293609 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ccctcgccgccggccgccgc 103 |||||||||||||||||||| Sbjct: 4532821 ccctcgccgccggccgccgc 4532840
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cctccaactccggcaacccc 217 |||||||||||||||||||| Sbjct: 6089650 cctccaactccggcaacccc 6089631
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 37876793 tcgccgccggccgccgccac 37876812 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 cgccgcccatcaagcccgtctcct 245 |||||||| ||||||||||||||| Sbjct: 10076972 cgccgcccctcaagcccgtctcct 10076949 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 6133417 cctcgccgccggccgccgcc 6133436
>gb|AC011593.8| Homo sapiens BAC clone RP11-437E9 from 2, complete sequence Length = 130349 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ccgcctcctcccgctcttcc 188 |||||||||||||||||||| Sbjct: 9797 ccgcctcctcccgctcttcc 9816
>gb|AC021075.11|AC021075 Homo sapiens 3 BAC RP11-242C15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 63632 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 ctcccatttcagtccatctc 50 |||||||||||||||||||| Sbjct: 13740 ctcccatttcagtccatctc 13759
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 140754 tcgccgccggccgccgccac 140735
>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0491F11 Length = 152274 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 98149 tcgccgccggccgccgccac 98168
>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0581F09 Length = 154248 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 cgccgcccatcaagcccgtctcct 245 |||||||| ||||||||||||||| Sbjct: 24441 cgccgcccctcaagcccgtctcct 24418
>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0014A21, from chromosome 3, complete sequence Length = 134014 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 125997 tcgccgccggccgccgccac 125978
>gb|AF062039.1|AF062039 Homo sapiens integrin alpha-2 subunit (ITGA2) gene, ITGA2-1 allele, partial cds Length = 3990 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 gccatccacatccccaccgcctcc 176 ||||||| |||||||||||||||| Sbjct: 3586 gccatccccatccccaccgcctcc 3609
>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1046_F10 Length = 118472 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ccctcgccgccggccgccgc 103 |||||||||||||||||||| Sbjct: 111540 ccctcgccgccggccgccgc 111559
>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031E09 Length = 176349 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 157774 cctcgccgccggccgccgcc 157793
>dbj|AP006061.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0414D03 Length = 169823 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ccctcgccgccggccgccgc 103 |||||||||||||||||||| Sbjct: 146916 ccctcgccgccggccgccgc 146935
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 12119 cctcgccgccggccgccgcc 12100
>dbj|AP005909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0006G10 Length = 156293 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ccctcgccgccggccgccgc 103 |||||||||||||||||||| Sbjct: 22677 ccctcgccgccggccgccgc 22696
>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556A05 Length = 158189 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 146107 cctcgccgccggccgccgcc 146088
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 122465 cctcgccgccggccgccgcc 122484
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0040H10 Length = 173301 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ccctcgccgccggccgccgc 103 |||||||||||||||||||| Sbjct: 134173 ccctcgccgccggccgccgc 134154
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 71910 cctcgccgccggccgccgcc 71929
>dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1579_C03 Length = 122851 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 101898 cctcgccgccggccgccgcc 101879
>dbj|AP004002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1116_C08 Length = 102317 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 44150 tcgccgccggccgccgccac 44169
>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0650H04 Length = 134533 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 102031 tcgccgccggccgccgccac 102050
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 aaaccccacgccgcacccctcgcc 91 ||||||| |||||||||||||||| Sbjct: 126451 aaaccccccgccgcacccctcgcc 126428
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 71152 tcgccgccggccgccgccac 71171 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 71037 tcgccgccggccgccgccac 71056
>dbj|AK119508.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-F07, full insert sequence Length = 1413 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ccctcgccgccggccgccgc 103 |||||||||||||||||||| Sbjct: 1286 ccctcgccgccggccgccgc 1305
>ref|XM_556155.1| Anopheles gambiae str. PEST ENSANGP00000026685 (ENSANGG00000022185), partial mRNA Length = 471 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ctcgccgccggccgccgcca 105 |||||||||||||||||||| Sbjct: 192 ctcgccgccggccgccgcca 173
>ref|XM_556154.1| Anopheles gambiae str. PEST ENSANGP00000029025 (ENSANGG00000022910), partial mRNA Length = 1026 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ctcgccgccggccgccgcca 105 |||||||||||||||||||| Sbjct: 138 ctcgccgccggccgccgcca 119
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 142657 cctcgccgccggccgccgcc 142676
>dbj|AK109529.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-D09, full insert sequence Length = 609 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 293 cctcgccgccggccgccgcc 312
>dbj|AK100930.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135J22, full insert sequence Length = 2405 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ccctcgccgccggccgccgc 103 |||||||||||||||||||| Sbjct: 960 ccctcgccgccggccgccgc 941
>dbj|AK073673.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033047P09, full insert sequence Length = 1320 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 206 cctcgccgccggccgccgcc 225
>dbj|AK073214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033015N07, full insert sequence Length = 1806 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 31 cctcgccgccggccgccgcc 50
>dbj|AK072273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004B14, full insert sequence Length = 2462 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ccctcgccgccggccgccgc 103 |||||||||||||||||||| Sbjct: 1027 ccctcgccgccggccgccgc 1008
>dbj|AK071392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091L24, full insert sequence Length = 1213 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 162 cctcgccgccggccgccgcc 143
>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full insert sequence Length = 1545 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 503 cctcgccgccggccgccgcc 522
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 1917052 tcgccgccggccgccgccac 1917033
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cgccgccggccgccgccacg 107 |||||||||||||||||||| Sbjct: 968389 cgccgccggccgccgccacg 968408
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cgccgccggccgccgccacg 107 |||||||||||||||||||| Sbjct: 2295302 cgccgccggccgccgccacg 2295283
>dbj|AK066468.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066B01, full insert sequence Length = 2023 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 216 cctcgccgccggccgccgcc 235
>gb|L26049.2|CREODA11X Chlamydomonas reinhardtii dynein heavy chain alpha (ODA11) gene, complete cds Length = 17941 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 gcaaccccccgccgccgcccatca 233 |||||||| ||||||||||||||| Sbjct: 15458 gcaaccccacgccgccgcccatca 15481
>dbj|AK064099.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-H10, full insert sequence Length = 1429 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ccctcgccgccggccgccgc 103 |||||||||||||||||||| Sbjct: 94 ccctcgccgccggccgccgc 75
>dbj|AK060158.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G03, full insert sequence Length = 1155 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 45 cctcgccgccggccgccgcc 26
>gb|AY103591.1| Zea mays PCO111548 mRNA sequence Length = 848 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ctcgccgccggccgccgcca 105 |||||||||||||||||||| Sbjct: 114 ctcgccgccggccgccgcca 95
>tpe|BN000652.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx123 gene for class III peroxidase 123 precursor, exons 1-3 Length = 2260 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 88 cctcgccgccggccgccgcc 69
>gb|L24121.1|HUMIA2A Homo sapiens integrin alpha 2 subunit (ITGA2) DNA, 5' UTR and promoter region Length = 1170 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 gccatccacatccccaccgcctcc 176 ||||||| |||||||||||||||| Sbjct: 737 gccatccccatccccaccgcctcc 760
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 ctcgccgccggccgccgccacgcc 109 ||||||||||||||||||| |||| Sbjct: 19033456 ctcgccgccggccgccgccgcgcc 19033479
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 25925835 cctcgccgccggccgccgcc 25925854 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 25277427 cctcgccgccggccgccgcc 25277408 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 201 ccaactccggcaaccccccgccgccgcc 228 ||||||||||| || ||||||||||||| Sbjct: 19884879 ccaactccggctactccccgccgccgcc 19884852 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 2885950 tcgccgccggccgccgccac 2885931
>emb|AL662974.3|OSJN00171 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061G20, complete sequence Length = 191218 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ctcgccgccggccgccgcca 105 |||||||||||||||||||| Sbjct: 126809 ctcgccgccggccgccgcca 126790
>emb|AL731630.2|OSJN00273 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072M01, complete sequence Length = 127712 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gctcacctccgcctcctcct 138 |||||||||||||||||||| Sbjct: 41464 gctcacctccgcctcctcct 41445
>emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb0059G18 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145661 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 130096 tcgccgccggccgccgccac 130115
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 201 ccaactccggcaaccccccgccgccgcc 228 ||||||||||| || ||||||||||||| Sbjct: 68595 ccaactccggctactccccgccgccgcc 68622
>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152914 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 16061 cctcgccgccggccgccgcc 16042
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161806 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cctcgccgccggccgccgcc 104 |||||||||||||||||||| Sbjct: 114012 cctcgccgccggccgccgcc 113993
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 68726 tcgccgccggccgccgccac 68707
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 ggttgcgccgcttccgggag 452 |||||||||||||||||||| Sbjct: 2931848 ggttgcgccgcttccgggag 2931829
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 cgccgcccatcaagcccgtctcct 245 |||||||| ||||||||||||||| Sbjct: 1571 cgccgcccctcaagcccgtctcct 1548
>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008G24 Length = 152736 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 tcgccgccggccgccgccac 106 |||||||||||||||||||| Sbjct: 136041 tcgccgccggccgccgccac 136060 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,927,826 Number of Sequences: 3902068 Number of extensions: 3927826 Number of successful extensions: 102498 Number of sequences better than 10.0: 130 Number of HSP's better than 10.0 without gapping: 154 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96906 Number of HSP's gapped (non-prelim): 5591 length of query: 461 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 439 effective length of database: 17,147,199,772 effective search space: 7527620699908 effective search space used: 7527620699908 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
